RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 PRSS2P07478 247 aa12.06□□□□□ -0.48
SMARCD3-202ENST00000356800 FXYD2P54710 66 aa12.06□□□□□ -0.48
SMARCD3-202ENST00000356800 KIAA0087Q14695 138 aa12.06□□□□□ -0.48
SMARCD3-202ENST00000356800 Q6ZVH6 145 aa12.06□□□□□ -0.48
SMARCD3-202ENST00000356800 ALMS1Q8TCU4 4167 aa12.05□□□□□ -0.48
SMARCD3-202ENST00000356800 CIRBPQ14011 172 aaKnown RBP12.05□□□□□ -0.48
SMARCD3-202ENST00000356800 SPANXDQ9BXN6 97 aa12.05□□□□□ -0.48
SMARCD3-202ENST00000356800 SPANXCQ9NY87 97 aa12.05□□□□□ -0.48
SMARCD3-202ENST00000356800 A6NDN8 102 aa12.04□□□□□ -0.48
SMARCD3-202ENST00000356800 CXCL5P42830 114 aa12.04□□□□□ -0.48
SMARCD3-202ENST00000356800 ADAMTSL4-AS1Q5T5F5 129 aa12.04□□□□□ -0.48
SMARCD3-202ENST00000356800 DNAH10Q8IVF4 4471 aa12.04□□□□□ -0.48
SMARCD3-202ENST00000356800 PTTG1IPP53801 180 aa12.03□□□□□ -0.48
SMARCD3-202ENST00000356800 TTC32Q5I0X7 151 aa12.03□□□□□ -0.48
SMARCD3-202ENST00000356800 RMI2Q96E14 147 aa12.03□□□□□ -0.48
SMARCD3-202ENST00000356800 DNAH6Q9C0G6 4158 aa12.02□□□□□ -0.49
SMARCD3-202ENST00000356800 KMT2AQ03164 3969 aa12.02□□□□□ -0.49
SMARCD3-202ENST00000356800 CFAP161Q6P656 301 aa12.02□□□□□ -0.49
SMARCD3-202ENST00000356800 C15orf56Q8N910 161 aa12.02□□□□□ -0.49
SMARCD3-202ENST00000356800 TMEM238LA0A1B0GVL6 79 aa12.01□□□□□ -0.49
SMARCD3-202ENST00000356800 A6NJY4 79 aa12.01□□□□□ -0.49
SMARCD3-202ENST00000356800 CKS1BP61024 79 aa12.01□□□□□ -0.49
SMARCD3-202ENST00000356800 MEIG1Q5JSS6 88 aa12.01□□□□□ -0.49
SMARCD3-202ENST00000356800 LINC00476Q8WZB0 136 aa12.01□□□□□ -0.49
SMARCD3-202ENST00000356800 SPAG11BQ08648 103 aa12□□□□□ -0.49
SMARCD3-202ENST00000356800 LINC00526Q96FQ7 95 aa12□□□□□ -0.49
SMARCD3-202ENST00000356800 M0R2N4 97 aa12□□□□□ -0.49
SMARCD3-202ENST00000356800 LY6G6CO95867 125 aa12□□□□□ -0.49
SMARCD3-202ENST00000356800 IFITM1P13164 125 aa12□□□□□ -0.49
SMARCD3-202ENST00000356800 C2orf82Q6UX34 121 aa12□□□□□ -0.49
SMARCD3-202ENST00000356800 MUSTN1Q8IVN3 82 aa12□□□□□ -0.49
SMARCD3-202ENST00000356800 C6orf223Q8N319 242 aa11.99□□□□□ -0.49
SMARCD3-202ENST00000356800 A0A1B0GWB2 263 aa11.98□□□□□ -0.49
SMARCD3-202ENST00000356800 SMIM13P0DJ93 91 aa11.98□□□□□ -0.49
SMARCD3-202ENST00000356800 RPL24P83731 157 aaKnown RBP11.98□□□□□ -0.49
SMARCD3-202ENST00000356800 HIGD2BQ4VC39 106 aa11.98□□□□□ -0.49
SMARCD3-202ENST00000356800 Q6ZR54 194 aa11.98□□□□□ -0.49
SMARCD3-202ENST00000356800 NHP2Q9NX24 153 aaKnown RBP11.97□□□□□ -0.49
SMARCD3-202ENST00000356800 COX11Q9Y6N1 276 aa11.97□□□□□ -0.49
SMARCD3-202ENST00000356800 DAND5Q8N907 189 aa11.97□□□□□ -0.49
SMARCD3-202ENST00000356800 PPDPFQ9H3Y8 114 aa11.97□□□□□ -0.49
SMARCD3-202ENST00000356800 USP17L23D6RBM5 183 aa11.96□□□□□ -0.5
SMARCD3-202ENST00000356800 TAX1BP3O14907 124 aa11.96□□□□□ -0.5
SMARCD3-202ENST00000356800 NTN5Q8WTR8 489 aaPredicted RBP11.96□□□□□ -0.5
SMARCD3-202ENST00000356800 COPS9Q8WXC6 57 aa11.96□□□□□ -0.5
SMARCD3-202ENST00000356800 ERG28Q9UKR5 140 aa11.96□□□□□ -0.5
SMARCD3-202ENST00000356800 GVQW2A0A096LPI5 108 aaPredicted RBP11.95□□□□□ -0.5
SMARCD3-202ENST00000356800 Q6ZRN7 208 aaPredicted RBP11.95□□□□□ -0.5
SMARCD3-202ENST00000356800 LINC00308Q8TCZ7 52 aa11.95□□□□□ -0.5
SMARCD3-202ENST00000356800 A0A0U1RRA0 63 aa11.94□□□□□ -0.5
SMARCD3-202ENST00000356800 A4D1N5 150 aa11.94□□□□□ -0.5
SMARCD3-202ENST00000356800 COX17Q14061 63 aa11.94□□□□□ -0.5
SMARCD3-202ENST00000356800 C10orf25Q5T742 122 aa11.94□□□□□ -0.5
SMARCD3-202ENST00000356800 ZNF561-AS1K7EIQ3 104 aa11.94□□□□□ -0.5
SMARCD3-202ENST00000356800 LINC00158P58513 81 aa11.94□□□□□ -0.5
SMARCD3-202ENST00000356800 WFDC2Q14508 124 aa11.94□□□□□ -0.5
SMARCD3-202ENST00000356800 UNQ6190/PRO20217Q6UXQ8 127 aa11.94□□□□□ -0.5
SMARCD3-202ENST00000356800 K7ERJ3 54 aa11.93□□□□□ -0.5
SMARCD3-202ENST00000356800 LECT2O14960 151 aa11.93□□□□□ -0.5
SMARCD3-202ENST00000356800 MIR7-3HGQ8N6C7 128 aa11.93□□□□□ -0.5
SMARCD3-202ENST00000356800 F8WDY8 70 aa11.92□□□□□ -0.5
SMARCD3-202ENST00000356800 EIF4EBP3O60516 100 aaPredicted RBP11.92□□□□□ -0.5
SMARCD3-202ENST00000356800 CFC1BP0CG36 223 aa11.92□□□□□ -0.5
SMARCD3-202ENST00000356800 CFC1P0CG37 223 aa11.92□□□□□ -0.5
SMARCD3-202ENST00000356800 C2orf48Q96LS8 159 aa11.92□□□□□ -0.5
SMARCD3-202ENST00000356800 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.91□□□□□ -0.5
SMARCD3-202ENST00000356800 PSCAO43653 123 aa11.91□□□□□ -0.5
SMARCD3-202ENST00000356800 PFN2P35080 140 aa11.91□□□□□ -0.5
SMARCD3-202ENST00000356800 DNAH2Q9P225 4427 aa11.91□□□□□ -0.5
SMARCD3-202ENST00000356800 A0A1B0GV90 55 aa11.91□□□□□ -0.5
SMARCD3-202ENST00000356800 NPC2P61916 151 aa11.91□□□□□ -0.5
SMARCD3-202ENST00000356800 SOSTDC1Q6X4U4 206 aa11.91□□□□□ -0.5
SMARCD3-202ENST00000356800 HYDINQ4G0P3 5121 aa11.9□□□□□ -0.5
SMARCD3-202ENST00000356800 C9orf116Q5BN46 136 aaPredicted RBP11.9□□□□□ -0.5
SMARCD3-202ENST00000356800 A0A0B4J2C4 111 aa11.89□□□□□ -0.51
SMARCD3-202ENST00000356800 TRBV30A0A0K0K1B3 111 aa11.88□□□□□ -0.51
SMARCD3-202ENST00000356800 C9orf118A6NHY6 69 aa11.88□□□□□ -0.51
SMARCD3-202ENST00000356800 RAB37Q96AX2 223 aa11.88□□□□□ -0.51
SMARCD3-202ENST00000356800 CAMK2N2Q96S95 79 aa11.88□□□□□ -0.51
SMARCD3-202ENST00000356800 C6orf48Q9UBA6 75 aa11.88□□□□□ -0.51
SMARCD3-202ENST00000356800 LRCOL1A6NCL2 159 aa11.87□□□□□ -0.51
SMARCD3-202ENST00000356800 SLPIP03973 132 aa11.87□□□□□ -0.51
SMARCD3-202ENST00000356800 Q6ZRU5 148 aa11.87□□□□□ -0.51
SMARCD3-202ENST00000356800 LOC107984156A0A0G2JMH3 177 aa11.87□□□□□ -0.51
SMARCD3-202ENST00000356800 ARL17AQ8IVW1 177 aa11.87□□□□□ -0.51
SMARCD3-202ENST00000356800 PRO1854Q9UHT4 67 aa11.86□□□□□ -0.51
SMARCD3-202ENST00000356800 SACSQ9NZJ4 4579 aa11.85□□□□□ -0.51
SMARCD3-202ENST00000356800 SYCNQ0VAF6 134 aa11.84□□□□□ -0.51
SMARCD3-202ENST00000356800 C1orf134Q5TEV5 83 aa11.84□□□□□ -0.51
SMARCD3-202ENST00000356800 H3BUT2 72 aa11.82□□□□□ -0.52
SMARCD3-202ENST00000356800 SND1-IT1Q9HBX3 110 aa11.82□□□□□ -0.52
SMARCD3-202ENST00000356800 PGPEP1Q9NXJ5 209 aa11.82□□□□□ -0.52
SMARCD3-202ENST00000356800 CARD19Q96LW7 228 aa11.81□□□□□ -0.52
SMARCD3-202ENST00000356800 FRAS1Q86XX4 4008 aa11.81□□□□□ -0.52
SMARCD3-202ENST00000356800 DNAH17Q9UFH2 4485 aa11.81□□□□□ -0.52
SMARCD3-202ENST00000356800 TSPAN13O95857 204 aa11.8□□□□□ -0.52
SMARCD3-202ENST00000356800 RNF151Q2KHN1 245 aa11.8□□□□□ -0.52
SMARCD3-202ENST00000356800 A0A1W2PPM0 123 aa11.79□□□□□ -0.52
SMARCD3-202ENST00000356800 C14orf177Q52M58 125 aa11.79□□□□□ -0.52
SMARCD3-202ENST00000356800 NAA38Q9BRA0 125 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms