RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 IGHV3OR16-9A0A0B4J2B5 98 aa7.09□□□□□ -1.27
PTPRA-203ENST00000356147 GIG44P09565 113 aaPredicted RBP7.09□□□□□ -1.27
PTPRA-203ENST00000356147 PLAC8L1A1L4L8 177 aa7.08□□□□□ -1.28
PTPRA-203ENST00000356147 LINC01561Q8N1V8 128 aa7.08□□□□□ -1.28
PTPRA-203ENST00000356147 HIVEP2P31629 2446 aa7.08□□□□□ -1.28
PTPRA-203ENST00000356147 CCL24O00175 119 aa7.07□□□□□ -1.28
PTPRA-203ENST00000356147 TRBV6-8A0A0A6YYG3 113 aa7.07□□□□□ -1.28
PTPRA-203ENST00000356147 J3QLI3 93 aa7.07□□□□□ -1.28
PTPRA-203ENST00000356147 PF4P02776 101 aa7.07□□□□□ -1.28
PTPRA-203ENST00000356147 RPL18AQ02543 176 aaKnown RBP7.07□□□□□ -1.28
PTPRA-203ENST00000356147 IGLV10-54A0A075B6I4 117 aa7.07□□□□□ -1.28
PTPRA-203ENST00000356147 DSCR9P59020 149 aa7.07□□□□□ -1.28
PTPRA-203ENST00000356147 FAM19A5Q7Z5A7 132 aaPredicted RBP7.07□□□□□ -1.28
PTPRA-203ENST00000356147 DSCR8Q96T75 97 aa7.07□□□□□ -1.28
PTPRA-203ENST00000356147 ATOX1O00244 68 aa7.06□□□□□ -1.28
PTPRA-203ENST00000356147 FSHBP01225 129 aa7.06□□□□□ -1.28
PTPRA-203ENST00000356147 C9orf116Q5BN46 136 aaPredicted RBP7.06□□□□□ -1.28
PTPRA-203ENST00000356147 Q8N3U1 123 aa7.06□□□□□ -1.28
PTPRA-203ENST00000356147 ESM1Q9NQ30 184 aa7.06□□□□□ -1.28
PTPRA-203ENST00000356147 SS18Q15532 418 aa7.06□□□□□ -1.28
PTPRA-203ENST00000356147 TRAV23DV6A0A075B6W5 121 aa7.05□□□□□ -1.28
PTPRA-203ENST00000356147 USP17L23D6RBM5 183 aa7.05□□□□□ -1.28
PTPRA-203ENST00000356147 H0YGX0 51 aa7.05□□□□□ -1.28
PTPRA-203ENST00000356147 FAM19A1Q7Z5A9 133 aa7.05□□□□□ -1.28
PTPRA-203ENST00000356147 LINC00959A0A1B0GUT2 108 aa7.05□□□□□ -1.28
PTPRA-203ENST00000356147 IBA57-AS1B1ANH7 110 aa7.05□□□□□ -1.28
PTPRA-203ENST00000356147 A0A087WZ39 114 aa7.04□□□□□ -1.28
PTPRA-203ENST00000356147 FHL2Q14192 279 aa7.04□□□□□ -1.28
PTPRA-203ENST00000356147 ORMDL1Q9P0S3 153 aa7.04□□□□□ -1.28
PTPRA-203ENST00000356147 TRBV6-4A0A1B0GX49 114 aa7.04□□□□□ -1.28
PTPRA-203ENST00000356147 VWFP04275 2813 aa7.04□□□□□ -1.28
PTPRA-203ENST00000356147 CRYGAP11844 174 aa7.03□□□□□ -1.28
PTPRA-203ENST00000356147 USP24Q9UPU5 2620 aa7.03□□□□□ -1.28
PTPRA-203ENST00000356147 J3KT08 172 aa7.03□□□□□ -1.28
PTPRA-203ENST00000356147 Q6JHZ5 121 aa7.03□□□□□ -1.28
PTPRA-203ENST00000356147 ENHOQ6UWT2 76 aa7.03□□□□□ -1.28
PTPRA-203ENST00000356147 DEFB4AO15263 64 aa7.02□□□□□ -1.29
PTPRA-203ENST00000356147 GYPEP15421 78 aa7.02□□□□□ -1.29
PTPRA-203ENST00000356147 C16orf74Q96GX8 76 aa7.02□□□□□ -1.29
PTPRA-203ENST00000356147 OVOL2Q9BRP0 275 aa7.02□□□□□ -1.29
PTPRA-203ENST00000356147 NANOS2P60321 138 aaKnown RBP7.02□□□□□ -1.29
PTPRA-203ENST00000356147 DNAJC9-AS1A6NH13 148 aa7.01□□□□□ -1.29
PTPRA-203ENST00000356147 OXTP01178 125 aa7.01□□□□□ -1.29
PTPRA-203ENST00000356147 SERP2Q8N6R1 65 aa7.01□□□□□ -1.29
PTPRA-203ENST00000356147 Q8NDZ9 215 aa7.01□□□□□ -1.29
PTPRA-203ENST00000356147 OBSCN-AS1Q96MR7 158 aa7.01□□□□□ -1.29
PTPRA-203ENST00000356147 LINC00269Q8N2A0 174 aa7.01□□□□□ -1.29
PTPRA-203ENST00000356147 TMEM86BQ8N661 226 aa7.01□□□□□ -1.29
PTPRA-203ENST00000356147 WFDC11Q8NEX6 87 aa7.01□□□□□ -1.29
PTPRA-203ENST00000356147 SPATA3Q8NHX4 192 aa7.01□□□□□ -1.29
PTPRA-203ENST00000356147 M0R2N4 97 aa7□□□□□ -1.29
PTPRA-203ENST00000356147 C6orf99Q4VX62 202 aa7□□□□□ -1.29
PTPRA-203ENST00000356147 GHRHP01286 108 aa7□□□□□ -1.29
PTPRA-203ENST00000356147 CCKP06307 115 aa7□□□□□ -1.29
PTPRA-203ENST00000356147 Q8N814 137 aa6.99□□□□□ -1.29
PTPRA-203ENST00000356147 BBC3Q96PG8 261 aaPredicted RBP6.99□□□□□ -1.29
PTPRA-203ENST00000356147 UPK3BQ9BT76 320 aa6.99□□□□□ -1.29
PTPRA-203ENST00000356147 TRAV25A0A0B4J276 109 aa6.99□□□□□ -1.29
PTPRA-203ENST00000356147 CSNK1G2-AS1Q8NCQ2 148 aa6.99□□□□□ -1.29
PTPRA-203ENST00000356147 SMIM9A6NGZ8 99 aa6.98□□□□□ -1.29
PTPRA-203ENST00000356147 DPH3Q96FX2 82 aa6.98□□□□□ -1.29
PTPRA-203ENST00000356147 C19orf73Q9NVV2 129 aa6.98□□□□□ -1.29
PTPRA-203ENST00000356147 C20orf197Q8N268 126 aa6.98□□□□□ -1.29
PTPRA-203ENST00000356147 C6orf223Q8N319 242 aa6.98□□□□□ -1.29
PTPRA-203ENST00000356147 NOTCH2Q04721 2471 aa6.97□□□□□ -1.29
PTPRA-203ENST00000356147 LY6G6DO95868 133 aa6.97□□□□□ -1.29
PTPRA-203ENST00000356147 ITPR2Q14571 2701 aa6.97□□□□□ -1.29
PTPRA-203ENST00000356147 DEFB113Q30KQ7 82 aa6.96□□□□□ -1.29
PTPRA-203ENST00000356147 UBR5O95071 2799 aaPredicted RBP6.96□□□□□ -1.29
PTPRA-203ENST00000356147 ANGP03950 147 aaKnown RBP6.96□□□□□ -1.3
PTPRA-203ENST00000356147 C4orf26Q17RF5 130 aa6.96□□□□□ -1.3
PTPRA-203ENST00000356147 S100A7L2Q5SY68 101 aa6.96□□□□□ -1.3
PTPRA-203ENST00000356147 C10orf25Q5T742 122 aa6.96□□□□□ -1.3
PTPRA-203ENST00000356147 LAMTOR3Q9UHA4 124 aa6.95□□□□□ -1.3
PTPRA-203ENST00000356147 HAMPP81172 84 aa6.95□□□□□ -1.3
PTPRA-203ENST00000356147 LINC01006Q8NI28 216 aa6.95□□□□□ -1.3
PTPRA-203ENST00000356147 SCXQ7RTU7 201 aa6.94□□□□□ -1.3
PTPRA-203ENST00000356147 Q8IZM0 81 aa6.94□□□□□ -1.3
PTPRA-203ENST00000356147 UNQ6190/PRO20217Q6UXQ8 127 aa6.94□□□□□ -1.3
PTPRA-203ENST00000356147 LINC00482Q8N8I6 264 aa6.94□□□□□ -1.3
PTPRA-203ENST00000356147 CHCHD10Q8WYQ3 142 aaPredicted RBP6.94□□□□□ -1.3
PTPRA-203ENST00000356147 TMEM256-PLSCR3K7ERE1 68 aa6.94□□□□□ -1.3
PTPRA-203ENST00000356147 IGLV1-51P01701 117 aa6.94□□□□□ -1.3
PTPRA-203ENST00000356147 TMEM258P61165 79 aa6.94□□□□□ -1.3
PTPRA-203ENST00000356147 KIAA0087Q14695 138 aa6.94□□□□□ -1.3
PTPRA-203ENST00000356147 HRCT1Q6UXD1 115 aa6.94□□□□□ -1.3
PTPRA-203ENST00000356147 JMJD7-PLA2G4BH0Y9G9 81 aa6.93□□□□□ -1.3
PTPRA-203ENST00000356147 UBL5Q9BZL1 73 aa6.93□□□□□ -1.3
PTPRA-203ENST00000356147 HTN3P15516 51 aa6.92□□□□□ -1.3
PTPRA-203ENST00000356147 UNC79Q9P2D8 2635 aa6.92□□□□□ -1.3
PTPRA-203ENST00000356147 XAGE1AQ9HD64 81 aa6.92□□□□□ -1.3
PTPRA-203ENST00000356147 SNURFQ9Y675 71 aa6.92□□□□□ -1.3
PTPRA-203ENST00000356147 KRTAP1-3Q8IUG1 177 aa6.92□□□□□ -1.3
PTPRA-203ENST00000356147 ZNF843Q8N446 348 aa6.92□□□□□ -1.3
PTPRA-203ENST00000356147 REG3AQ06141 175 aa6.91□□□□□ -1.3
PTPRA-203ENST00000356147 C5orf47Q569G3 176 aa6.91□□□□□ -1.3
PTPRA-203ENST00000356147 TRAV10A0A0B4J240 114 aa6.91□□□□□ -1.3
PTPRA-203ENST00000356147 Q6ZQY7 126 aa6.91□□□□□ -1.3
PTPRA-203ENST00000356147 RBM3P98179 157 aaKnown RBP6.9□□□□□ -1.3
PTPRA-203ENST00000356147 LINC00167Q96N53 147 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms