RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
HOXA1-202ENST00000355633 K7EP34 96 aa9.12□□□□□ -0.95
HOXA1-202ENST00000355633 C6orf226Q5I0X4 101 aa9.12□□□□□ -0.95
HOXA1-202ENST00000355633 HIST1H4GQ99525 98 aa9.12□□□□□ -0.95
HOXA1-202ENST00000355633 HERV-K104P63124 156 aa9.11□□□□□ -0.95
HOXA1-202ENST00000355633 TAL2Q16559 108 aa9.11□□□□□ -0.95
HOXA1-202ENST00000355633 J3QR89 54 aa9.1□□□□□ -0.95
HOXA1-202ENST00000355633 SRSF9Q13242 221 aaKnown RBP eCLIP9.1□□□□□ -0.95
HOXA1-202ENST00000355633 SPANXB1Q9NS25 103 aaPredicted RBP9.1□□□□□ -0.95
HOXA1-202ENST00000355633 CSMD3Q7Z407 3707 aa9.1□□□□□ -0.95
HOXA1-202ENST00000355633 GCSHP23434 173 aa9.09□□□□□ -0.95
HOXA1-202ENST00000355633 KIAA0087Q14695 138 aa9.09□□□□□ -0.95
HOXA1-202ENST00000355633 SFTA2Q6UW10 78 aa9.09□□□□□ -0.95
HOXA1-202ENST00000355633 RMI2Q96E14 147 aa9.09□□□□□ -0.95
HOXA1-202ENST00000355633 DNAH7Q8WXX0 4024 aa9.09□□□□□ -0.95
HOXA1-202ENST00000355633 CEND1Q8N111 149 aa9.09□□□□□ -0.95
HOXA1-202ENST00000355633 C9orf118A6NHY6 69 aa9.08□□□□□ -0.96
HOXA1-202ENST00000355633 TIMM17BO60830 172 aa9.08□□□□□ -0.96
HOXA1-202ENST00000355633 SPAG11BQ08648 103 aa9.08□□□□□ -0.96
HOXA1-202ENST00000355633 CIRBPQ14011 172 aaKnown RBP9.08□□□□□ -0.96
HOXA1-202ENST00000355633 MEIG1Q5JSS6 88 aa9.08□□□□□ -0.96
HOXA1-202ENST00000355633 LITAFQ99732 161 aa9.08□□□□□ -0.96
HOXA1-202ENST00000355633 KRTAP1-5Q9BYS1 174 aa9.08□□□□□ -0.96
HOXA1-202ENST00000355633 A6NDN8 102 aa9.07□□□□□ -0.96
HOXA1-202ENST00000355633 CXCL5P42830 114 aa9.07□□□□□ -0.96
HOXA1-202ENST00000355633 C2orf82Q6UX34 121 aa9.07□□□□□ -0.96
HOXA1-202ENST00000355633 TM2D2Q9BX73 214 aa9.07□□□□□ -0.96
HOXA1-202ENST00000355633 TSPAN13O95857 204 aa9.06□□□□□ -0.96
HOXA1-202ENST00000355633 TTC32Q5I0X7 151 aa9.06□□□□□ -0.96
HOXA1-202ENST00000355633 PGPEP1Q9NXJ5 209 aa9.06□□□□□ -0.96
HOXA1-202ENST00000355633 STARD9Q9P2P6 4700 aa9.06□□□□□ -0.96
HOXA1-202ENST00000355633 FXYD2P54710 66 aa9.05□□□□□ -0.96
HOXA1-202ENST00000355633 ADAMTSL4-AS1Q5T5F5 129 aa9.05□□□□□ -0.96
HOXA1-202ENST00000355633 SPANXDQ9BXN6 97 aa9.05□□□□□ -0.96
HOXA1-202ENST00000355633 SPANXCQ9NY87 97 aa9.05□□□□□ -0.96
HOXA1-202ENST00000355633 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
HOXA1-202ENST00000355633 PLECQ15149 4684 aaKnown RBP9.05□□□□□ -0.96
HOXA1-202ENST00000355633 C15orf56Q8N910 161 aa9.05□□□□□ -0.96
HOXA1-202ENST00000355633 NBDYA0A0U1RRE5 68 aa9.04□□□□□ -0.96
HOXA1-202ENST00000355633 SMIM13P0DJ93 91 aa9.04□□□□□ -0.96
HOXA1-202ENST00000355633 HIGD2BQ4VC39 106 aa9.04□□□□□ -0.96
HOXA1-202ENST00000355633 C6orf223Q8N319 242 aa9.04□□□□□ -0.96
HOXA1-202ENST00000355633 LINC00526Q96FQ7 95 aa9.04□□□□□ -0.96
HOXA1-202ENST00000355633 ZNF561-AS1K7EIQ3 104 aa9.04□□□□□ -0.96
HOXA1-202ENST00000355633 CASC10Q5T4H9 136 aa9.04□□□□□ -0.96
HOXA1-202ENST00000355633 DAND5Q8N907 189 aa9.03□□□□□ -0.96
HOXA1-202ENST00000355633 NTN5Q8WTR8 489 aaPredicted RBP9.03□□□□□ -0.96
HOXA1-202ENST00000355633 ERG28Q9UKR5 140 aa9.03□□□□□ -0.96
HOXA1-202ENST00000355633 MUSTN1Q8IVN3 82 aa9.02□□□□□ -0.97
HOXA1-202ENST00000355633 LYSTQ99698 3801 aa9.02□□□□□ -0.97
HOXA1-202ENST00000355633 LINC00158P58513 81 aa9.02□□□□□ -0.97
HOXA1-202ENST00000355633 RPL24P83731 157 aaKnown RBP9.02□□□□□ -0.97
HOXA1-202ENST00000355633 GVQW2A0A096LPI5 108 aaPredicted RBP9.01□□□□□ -0.97
HOXA1-202ENST00000355633 C3orf84H3BNL1 204 aa9.01□□□□□ -0.97
HOXA1-202ENST00000355633 PFN2P35080 140 aa9.01□□□□□ -0.97
HOXA1-202ENST00000355633 NPC2P61916 151 aa9.01□□□□□ -0.97
HOXA1-202ENST00000355633 UNQ6190/PRO20217Q6UXQ8 127 aa9.01□□□□□ -0.97
HOXA1-202ENST00000355633 SPCS1Q9Y6A9 102 aa9.01□□□□□ -0.97
HOXA1-202ENST00000355633 IFITM1P13164 125 aa9□□□□□ -0.97
HOXA1-202ENST00000355633 C10orf25Q5T742 122 aa9□□□□□ -0.97
HOXA1-202ENST00000355633 CAMK2N2Q96S95 79 aa9□□□□□ -0.97
HOXA1-202ENST00000355633 NHP2Q9NX24 153 aaKnown RBP9□□□□□ -0.97
HOXA1-202ENST00000355633 DNAH1Q9P2D7 4330 aa9□□□□□ -0.97
HOXA1-202ENST00000355633 USP17L23D6RBM5 183 aa9□□□□□ -0.97
HOXA1-202ENST00000355633 FABP2P12104 132 aa9□□□□□ -0.97
HOXA1-202ENST00000355633 MIR7-3HGQ8N6C7 128 aa9□□□□□ -0.97
HOXA1-202ENST00000355633 C2orf48Q96LS8 159 aa9□□□□□ -0.97
HOXA1-202ENST00000355633 A0A1W2PPM0 123 aa8.99□□□□□ -0.97
HOXA1-202ENST00000355633 H3BUT2 72 aa8.99□□□□□ -0.97
HOXA1-202ENST00000355633 PSCAO43653 123 aa8.99□□□□□ -0.97
HOXA1-202ENST00000355633 LINC00308Q8TCZ7 52 aa8.99□□□□□ -0.97
HOXA1-202ENST00000355633 TGP01266 2768 aa8.99□□□□□ -0.97
HOXA1-202ENST00000355633 COX17Q14061 63 aa8.98□□□□□ -0.97
HOXA1-202ENST00000355633 COPS9Q8WXC6 57 aa8.98□□□□□ -0.97
HOXA1-202ENST00000355633 TENM2Q9NT68 2774 aa8.98□□□□□ -0.97
HOXA1-202ENST00000355633 A4D1N5 150 aa8.98□□□□□ -0.97
HOXA1-202ENST00000355633 F8WDY8 70 aa8.98□□□□□ -0.97
HOXA1-202ENST00000355633 M0R2N4 97 aa8.98□□□□□ -0.97
HOXA1-202ENST00000355633 LY6G6CO95867 125 aa8.98□□□□□ -0.97
HOXA1-202ENST00000355633 C9orf116Q5BN46 136 aaPredicted RBP8.98□□□□□ -0.97
HOXA1-202ENST00000355633 EIF4EBP3O60516 100 aaPredicted RBP8.97□□□□□ -0.97
HOXA1-202ENST00000355633 C6orf48Q9UBA6 75 aa8.97□□□□□ -0.97
HOXA1-202ENST00000355633 K7ERJ3 54 aa8.97□□□□□ -0.97
HOXA1-202ENST00000355633 LECT2O14960 151 aa8.97□□□□□ -0.97
HOXA1-202ENST00000355633 SOSTDC1Q6X4U4 206 aa8.97□□□□□ -0.97
HOXA1-202ENST00000355633 Q6ZRU5 148 aa8.97□□□□□ -0.97
HOXA1-202ENST00000355633 TRBV30A0A0K0K1B3 111 aa8.96□□□□□ -0.98
HOXA1-202ENST00000355633 LINC00476Q8WZB0 136 aa8.96□□□□□ -0.98
HOXA1-202ENST00000355633 A0A1B0GWB2 263 aa8.95□□□□□ -0.98
HOXA1-202ENST00000355633 SYCNQ0VAF6 134 aa8.95□□□□□ -0.98
HOXA1-202ENST00000355633 VPS13DQ5THJ4 4388 aa8.95□□□□□ -0.98
HOXA1-202ENST00000355633 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.95□□□□□ -0.98
HOXA1-202ENST00000355633 F8W1H4 67 aa8.95□□□□□ -0.98
HOXA1-202ENST00000355633 CFC1BP0CG36 223 aa8.95□□□□□ -0.98
HOXA1-202ENST00000355633 CFC1P0CG37 223 aa8.95□□□□□ -0.98
HOXA1-202ENST00000355633 RAB37Q96AX2 223 aa8.95□□□□□ -0.98
HOXA1-202ENST00000355633 PPDPFQ9H3Y8 114 aa8.95□□□□□ -0.98
HOXA1-202ENST00000355633 WFDC2Q14508 124 aa8.93□□□□□ -0.98
HOXA1-202ENST00000355633 Q6ZR54 194 aa8.93□□□□□ -0.98
HOXA1-202ENST00000355633 Q6ZRN7 208 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms