RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 HIST1H4GQ99525 98 aa6.37□□□□□ -1.39
NPHP1-202ENST00000355301 TM2D2Q9BX73 214 aa6.37□□□□□ -1.39
NPHP1-202ENST00000355301 ALMS1Q8TCU4 4167 aa6.36□□□□□ -1.39
NPHP1-202ENST00000355301 M0R143 59 aa6.36□□□□□ -1.39
NPHP1-202ENST00000355301 CIRBPQ14011 172 aaKnown RBP6.36□□□□□ -1.39
NPHP1-202ENST00000355301 C2orf82Q6UX34 121 aa6.36□□□□□ -1.39
NPHP1-202ENST00000355301 SNHG12Q9BXW3 62 aa6.36□□□□□ -1.39
NPHP1-202ENST00000355301 DNAH6Q9C0G6 4158 aa6.36□□□□□ -1.39
NPHP1-202ENST00000355301 GVQW2A0A096LPI5 108 aaPredicted RBP6.35□□□□□ -1.39
NPHP1-202ENST00000355301 ZNF561-AS1K7EIQ3 104 aa6.35□□□□□ -1.39
NPHP1-202ENST00000355301 HINT1P49773 126 aaPredicted RBP6.35□□□□□ -1.39
NPHP1-202ENST00000355301 SRSF9Q13242 221 aaKnown RBP eCLIP6.35□□□□□ -1.39
NPHP1-202ENST00000355301 BVES-AS1Q5T3Y7 98 aa6.35□□□□□ -1.39
NPHP1-202ENST00000355301 ADAMTSL4-AS1Q5T5F5 129 aa6.35□□□□□ -1.39
NPHP1-202ENST00000355301 NTN5Q8WTR8 489 aaPredicted RBP6.35□□□□□ -1.39
NPHP1-202ENST00000355301 MEIG1Q5JSS6 88 aa6.35□□□□□ -1.39
NPHP1-202ENST00000355301 Q6ZVH6 145 aa6.35□□□□□ -1.39
NPHP1-202ENST00000355301 CEND1Q8N111 149 aa6.35□□□□□ -1.39
NPHP1-202ENST00000355301 C6orf223Q8N319 242 aa6.35□□□□□ -1.39
NPHP1-202ENST00000355301 LINC00476Q8WZB0 136 aa6.35□□□□□ -1.39
NPHP1-202ENST00000355301 LINC00526Q96FQ7 95 aa6.35□□□□□ -1.39
NPHP1-202ENST00000355301 SPANXDQ9BXN6 97 aa6.35□□□□□ -1.39
NPHP1-202ENST00000355301 SPANXCQ9NY87 97 aa6.35□□□□□ -1.39
NPHP1-202ENST00000355301 HIGD2BQ4VC39 106 aa6.34□□□□□ -1.39
NPHP1-202ENST00000355301 Q6ZR54 194 aa6.34□□□□□ -1.39
NPHP1-202ENST00000355301 C2orf48Q96LS8 159 aa6.34□□□□□ -1.39
NPHP1-202ENST00000355301 USP17L23D6RBM5 183 aa6.33□□□□□ -1.4
NPHP1-202ENST00000355301 F8WDY8 70 aa6.33□□□□□ -1.4
NPHP1-202ENST00000355301 EREGO14944 169 aa6.33□□□□□ -1.4
NPHP1-202ENST00000355301 LY6G6CO95867 125 aa6.33□□□□□ -1.4
NPHP1-202ENST00000355301 SMIM13P0DJ93 91 aa6.33□□□□□ -1.4
NPHP1-202ENST00000355301 GCSHP23434 173 aa6.33□□□□□ -1.4
NPHP1-202ENST00000355301 ERG28Q9UKR5 140 aa6.33□□□□□ -1.4
NPHP1-202ENST00000355301 HYDINQ4G0P3 5121 aa6.33□□□□□ -1.4
NPHP1-202ENST00000355301 FXYD2P54710 66 aa6.33□□□□□ -1.4
NPHP1-202ENST00000355301 COX17Q14061 63 aa6.33□□□□□ -1.4
NPHP1-202ENST00000355301 BATFQ16520 125 aa6.33□□□□□ -1.4
NPHP1-202ENST00000355301 C10orf25Q5T742 122 aa6.33□□□□□ -1.4
NPHP1-202ENST00000355301 UNQ6190/PRO20217Q6UXQ8 127 aa6.33□□□□□ -1.4
NPHP1-202ENST00000355301 Q6ZRN7 208 aaPredicted RBP6.33□□□□□ -1.4
NPHP1-202ENST00000355301 M0R2N4 97 aa6.32□□□□□ -1.4
NPHP1-202ENST00000355301 PSCAO43653 123 aa6.32□□□□□ -1.4
NPHP1-202ENST00000355301 PTTG1IPP53801 180 aa6.32□□□□□ -1.4
NPHP1-202ENST00000355301 DAND5Q8N907 189 aa6.32□□□□□ -1.4
NPHP1-202ENST00000355301 CAMK2N2Q96S95 79 aa6.32□□□□□ -1.4
NPHP1-202ENST00000355301 SACSQ9NZJ4 4579 aa6.31□□□□□ -1.4
NPHP1-202ENST00000355301 TRBV30A0A0K0K1B3 111 aa6.31□□□□□ -1.4
NPHP1-202ENST00000355301 A0A0U1RRA0 63 aa6.31□□□□□ -1.4
NPHP1-202ENST00000355301 IFITM1P13164 125 aa6.31□□□□□ -1.4
NPHP1-202ENST00000355301 PFN2P35080 140 aa6.31□□□□□ -1.4
NPHP1-202ENST00000355301 MUSTN1Q8IVN3 82 aa6.31□□□□□ -1.4
NPHP1-202ENST00000355301 LINC00158P58513 81 aa6.31□□□□□ -1.4
NPHP1-202ENST00000355301 LBHQ53QV2 105 aaPredicted RBP6.31□□□□□ -1.4
NPHP1-202ENST00000355301 MIR7-3HGQ8N6C7 128 aa6.31□□□□□ -1.4
NPHP1-202ENST00000355301 PPDPFQ9H3Y8 114 aa6.31□□□□□ -1.4
NPHP1-202ENST00000355301 C6orf48Q9UBA6 75 aa6.31□□□□□ -1.4
NPHP1-202ENST00000355301 LECT2O14960 151 aa6.3□□□□□ -1.4
NPHP1-202ENST00000355301 RPL24P83731 157 aaKnown RBP6.3□□□□□ -1.4
NPHP1-202ENST00000355301 C9orf116Q5BN46 136 aaPredicted RBP6.3□□□□□ -1.4
NPHP1-202ENST00000355301 Q6ZRU5 148 aa6.3□□□□□ -1.4
NPHP1-202ENST00000355301 LINC00308Q8TCZ7 52 aa6.3□□□□□ -1.4
NPHP1-202ENST00000355301 TMEM238LA0A1B0GVL6 79 aa6.29□□□□□ -1.4
NPHP1-202ENST00000355301 A6NDN8 102 aa6.29□□□□□ -1.4
NPHP1-202ENST00000355301 A6NJY4 79 aa6.29□□□□□ -1.4
NPHP1-202ENST00000355301 EIF4EBP3O60516 100 aaPredicted RBP6.29□□□□□ -1.4
NPHP1-202ENST00000355301 SYCNQ0VAF6 134 aa6.29□□□□□ -1.4
NPHP1-202ENST00000355301 WFDC2Q14508 124 aa6.29□□□□□ -1.4
NPHP1-202ENST00000355301 COPS9Q8WXC6 57 aa6.29□□□□□ -1.4
NPHP1-202ENST00000355301 DNAH17Q9UFH2 4485 aa6.29□□□□□ -1.4
NPHP1-202ENST00000355301 SLPIP03973 132 aa6.29□□□□□ -1.4
NPHP1-202ENST00000355301 NPC2P61916 151 aa6.29□□□□□ -1.4
NPHP1-202ENST00000355301 COL5A1-AS1Q5SY13 56 aa6.29□□□□□ -1.4
NPHP1-202ENST00000355301 SOSTDC1Q6X4U4 206 aa6.29□□□□□ -1.4
NPHP1-202ENST00000355301 A4D1N5 150 aa6.28□□□□□ -1.4
NPHP1-202ENST00000355301 LRCOL1A6NCL2 159 aa6.28□□□□□ -1.4
NPHP1-202ENST00000355301 C14orf177Q52M58 125 aa6.28□□□□□ -1.4
NPHP1-202ENST00000355301 NHP2Q9NX24 153 aaKnown RBP6.28□□□□□ -1.4
NPHP1-202ENST00000355301 FRAS1Q86XX4 4008 aa6.27□□□□□ -1.41
NPHP1-202ENST00000355301 LOC107984156A0A0G2JMH3 177 aa6.27□□□□□ -1.41
NPHP1-202ENST00000355301 A0A1B0GWB2 263 aa6.27□□□□□ -1.41
NPHP1-202ENST00000355301 RNF151Q2KHN1 245 aa6.27□□□□□ -1.41
NPHP1-202ENST00000355301 ARL17AQ8IVW1 177 aa6.27□□□□□ -1.41
NPHP1-202ENST00000355301 CARD19Q96LW7 228 aa6.27□□□□□ -1.41
NPHP1-202ENST00000355301 C1orf134Q5TEV5 83 aa6.27□□□□□ -1.41
NPHP1-202ENST00000355301 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.26□□□□□ -1.41
NPHP1-202ENST00000355301 NDUFC2-KCTD14E9PQ53 114 aa6.26□□□□□ -1.41
NPHP1-202ENST00000355301 CFC1BP0CG36 223 aa6.26□□□□□ -1.41
NPHP1-202ENST00000355301 CFC1P0CG37 223 aa6.26□□□□□ -1.41
NPHP1-202ENST00000355301 CNBPP62633 177 aaKnown RBP6.26□□□□□ -1.41
NPHP1-202ENST00000355301 SND1-IT1Q9HBX3 110 aa6.26□□□□□ -1.41
NPHP1-202ENST00000355301 K7ERJ3 54 aa6.25□□□□□ -1.41
NPHP1-202ENST00000355301 TLX1NBP0CAT3 122 aa6.25□□□□□ -1.41
NPHP1-202ENST00000355301 HECTD4Q9Y4D8 3996 aa6.24□□□□□ -1.41
NPHP1-202ENST00000355301 A0A0B4J2C4 111 aa6.24□□□□□ -1.41
NPHP1-202ENST00000355301 TAX1BP3O14907 124 aa6.24□□□□□ -1.41
NPHP1-202ENST00000355301 A0A087WTM6 91 aa6.23□□□□□ -1.41
NPHP1-202ENST00000355301 Q6ZRP5 223 aa6.23□□□□□ -1.41
NPHP1-202ENST00000355301 Q8N814 137 aa6.23□□□□□ -1.41
NPHP1-202ENST00000355301 PRO1854Q9UHT4 67 aa6.23□□□□□ -1.41
NPHP1-202ENST00000355301 FAT2Q9NYQ8 4349 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms