RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 EDN2P20800 178 aa9.04□□□□□ -0.96
SYNCRIP-201ENST00000355238 Q6ZSN1 163 aa9.03□□□□□ -0.96
SYNCRIP-201ENST00000355238 A0A087WSZ3 146 aa9.02□□□□□ -0.96
SYNCRIP-201ENST00000355238 DSCAMO60469 2012 aa9.02□□□□□ -0.97
SYNCRIP-201ENST00000355238 LINC01006Q8NI28 216 aa9.01□□□□□ -0.97
SYNCRIP-201ENST00000355238 C2orf48Q96LS8 159 aa9.01□□□□□ -0.97
SYNCRIP-201ENST00000355238 TECTAO75443 2155 aa9.01□□□□□ -0.97
SYNCRIP-201ENST00000355238 IGHV6-1A0A0B4J1U7 121 aa9.01□□□□□ -0.97
SYNCRIP-201ENST00000355238 SPATA3Q8NHX4 192 aa9.01□□□□□ -0.97
SYNCRIP-201ENST00000355238 SPG11Q96JI7 2443 aa9.01□□□□□ -0.97
SYNCRIP-201ENST00000355238 AGRNO00468 2067 aa9.01□□□□□ -0.97
SYNCRIP-201ENST00000355238 SMIM29Q86T20 159 aa9.01□□□□□ -0.97
SYNCRIP-201ENST00000355238 C1orf64Q8NEQ6 169 aa9.01□□□□□ -0.97
SYNCRIP-201ENST00000355238 Q8N2B8 174 aa9□□□□□ -0.97
SYNCRIP-201ENST00000355238 Q9BRP9 147 aa9□□□□□ -0.97
SYNCRIP-201ENST00000355238 PRRC2AP48634 2157 aaKnown RBP9□□□□□ -0.97
SYNCRIP-201ENST00000355238 A0A1B0GW54 56 aa8.99□□□□□ -0.97
SYNCRIP-201ENST00000355238 C10orf142B7Z368 130 aa8.99□□□□□ -0.97
SYNCRIP-201ENST00000355238 HIVEP2P31629 2446 aa8.99□□□□□ -0.97
SYNCRIP-201ENST00000355238 C6orf223Q8N319 242 aa8.98□□□□□ -0.97
SYNCRIP-201ENST00000355238 A8MTW9 85 aa8.98□□□□□ -0.97
SYNCRIP-201ENST00000355238 IGLV5-45A0A087WSX0 123 aa8.98□□□□□ -0.97
SYNCRIP-201ENST00000355238 COL5A1P20908 1838 aaPredicted RBP8.97□□□□□ -0.97
SYNCRIP-201ENST00000355238 LINC00315P59091 139 aa8.97□□□□□ -0.97
SYNCRIP-201ENST00000355238 FAM218AQ96MZ4 157 aa8.97□□□□□ -0.97
SYNCRIP-201ENST00000355238 CSPG4Q6UVK1 2322 aa8.96□□□□□ -0.97
SYNCRIP-201ENST00000355238 SERTAD4-AS1Q5TG53 156 aa8.96□□□□□ -0.98
SYNCRIP-201ENST00000355238 LOC110117498A0A087WWA1 95 aa8.96□□□□□ -0.98
SYNCRIP-201ENST00000355238 H3BPC8 53 aa8.95□□□□□ -0.98
SYNCRIP-201ENST00000355238 CPAMD8Q8IZJ3 1885 aa8.94□□□□□ -0.98
SYNCRIP-201ENST00000355238 IGLV1-51P01701 117 aa8.94□□□□□ -0.98
SYNCRIP-201ENST00000355238 DEFB116Q30KQ4 102 aa8.94□□□□□ -0.98
SYNCRIP-201ENST00000355238 Q6ZQT0 140 aa8.94□□□□□ -0.98
SYNCRIP-201ENST00000355238 IGHV3OR16-9A0A0B4J2B5 98 aa8.94□□□□□ -0.98
SYNCRIP-201ENST00000355238 ACACBO00763 2458 aa8.93□□□□□ -0.98
SYNCRIP-201ENST00000355238 TP53AIP1Q9HCN2 124 aa8.92□□□□□ -0.98
SYNCRIP-201ENST00000355238 FAM19A4Q96LR4 140 aa8.92□□□□□ -0.98
SYNCRIP-201ENST00000355238 SPAG11AQ6PDA7 123 aa8.92□□□□□ -0.98
SYNCRIP-201ENST00000355238 Q9UF83 564 aa8.92□□□□□ -0.98
SYNCRIP-201ENST00000355238 KIAA0087Q14695 138 aa8.91□□□□□ -0.98
SYNCRIP-201ENST00000355238 A0A1B0GU69 56 aa8.9□□□□□ -0.98
SYNCRIP-201ENST00000355238 AVPP01185 164 aa8.9□□□□□ -0.98
SYNCRIP-201ENST00000355238 LRP4O75096 1905 aa8.9□□□□□ -0.98
SYNCRIP-201ENST00000355238 ZFHX2Q9C0A1 2572 aaPredicted RBP8.9□□□□□ -0.98
SYNCRIP-201ENST00000355238 VPREB1P12018 145 aa8.9□□□□□ -0.98
SYNCRIP-201ENST00000355238 C11orf72Q8NBR9 251 aa8.89□□□□□ -0.99
SYNCRIP-201ENST00000355238 Q6ZRU5 148 aa8.89□□□□□ -0.99
SYNCRIP-201ENST00000355238 PTPRSQ13332 1948 aa8.89□□□□□ -0.99
SYNCRIP-201ENST00000355238 CIRBP-AS1Q8TBR5 109 aa8.89□□□□□ -0.99
SYNCRIP-201ENST00000355238 TM2D3Q9BRN9 247 aa8.89□□□□□ -0.99
SYNCRIP-201ENST00000355238 ERC2-IT1O76042 136 aa8.88□□□□□ -0.99
SYNCRIP-201ENST00000355238 Q6ZTC4 211 aa8.88□□□□□ -0.99
SYNCRIP-201ENST00000355238 INAFM1C9JVW0 142 aa8.87□□□□□ -0.99
SYNCRIP-201ENST00000355238 ACYP2P14621 99 aa8.87□□□□□ -0.99
SYNCRIP-201ENST00000355238 SMCR5Q8TEV8 140 aa8.87□□□□□ -0.99
SYNCRIP-201ENST00000355238 ATRXP46100 2492 aa8.87□□□□□ -0.99
SYNCRIP-201ENST00000355238 SPINK1P00995 79 aa8.86□□□□□ -0.99
SYNCRIP-201ENST00000355238 PTPN13Q12923 2485 aa8.86□□□□□ -0.99
SYNCRIP-201ENST00000355238 ELOF1P60002 83 aaKnown RBP8.86□□□□□ -0.99
SYNCRIP-201ENST00000355238 ADAMTS20P59510 1910 aa8.86□□□□□ -0.99
SYNCRIP-201ENST00000355238 LYPD5Q6UWN5 251 aa8.86□□□□□ -0.99
SYNCRIP-201ENST00000355238 C8orf87E5RJ46 101 aa8.85□□□□□ -0.99
SYNCRIP-201ENST00000355238 NHLRC4P0CG21 123 aaPredicted RBP8.85□□□□□ -0.99
SYNCRIP-201ENST00000355238 CEP192Q8TEP8 1941 aa8.85□□□□□ -0.99
SYNCRIP-201ENST00000355238 OTOGLQ3ZCN5 2332 aa8.84□□□□□ -0.99
SYNCRIP-201ENST00000355238 LITAFQ99732 161 aa8.84□□□□□ -0.99
SYNCRIP-201ENST00000355238 FHL3Q13643 280 aa8.83□□□□□ -1
SYNCRIP-201ENST00000355238 EP400Q96L91 3159 aa8.83□□□□□ -1
SYNCRIP-201ENST00000355238 C22orf24Q9Y442 160 aa8.83□□□□□ -1
SYNCRIP-201ENST00000355238 RETNLBQ9BQ08 111 aa8.83□□□□□ -1
SYNCRIP-201ENST00000355238 Q8NBF4 154 aa8.83□□□□□ -1
SYNCRIP-201ENST00000355238 CYP4F30PQ9H0H9 118 aa8.83□□□□□ -1
SYNCRIP-201ENST00000355238 TET2Q6N021 2002 aaPredicted RBP8.82□□□□□ -1
SYNCRIP-201ENST00000355238 M0R2N4 97 aa8.81□□□□□ -1
SYNCRIP-201ENST00000355238 PRLHP81277 87 aa8.81□□□□□ -1
SYNCRIP-201ENST00000355238 CDSNQ15517 529 aa8.81□□□□□ -1
SYNCRIP-201ENST00000355238 EXPH5Q8NEV8 1989 aa8.8□□□□□ -1
SYNCRIP-201ENST00000355238 SONP18583 2426 aaKnown RBP8.8□□□□□ -1
SYNCRIP-201ENST00000355238 CACNA1AO00555 2505 aa8.8□□□□□ -1
SYNCRIP-201ENST00000355238 TRAV22A0A0B4J277 110 aa8.8□□□□□ -1
SYNCRIP-201ENST00000355238 X6R8D5 127 aa8.8□□□□□ -1
SYNCRIP-201ENST00000355238 C6orf48Q9UBA6 75 aa8.8□□□□□ -1
SYNCRIP-201ENST00000355238 LINC01556Q5JQF7 62 aa8.79□□□□□ -1
SYNCRIP-201ENST00000355238 LY6G6DO95868 133 aa8.79□□□□□ -1
SYNCRIP-201ENST00000355238 KLKP1Q107X0 134 aa8.79□□□□□ -1
SYNCRIP-201ENST00000355238 C16orf95Q9H693 158 aa8.79□□□□□ -1
SYNCRIP-201ENST00000355238 RAI1Q7Z5J4 1906 aaPredicted RBP8.79□□□□□ -1
SYNCRIP-201ENST00000355238 ATP11AUNQ6ZP68 121 aa8.78□□□□□ -1
SYNCRIP-201ENST00000355238 CD164Q04900 197 aa8.77□□□□□ -1
SYNCRIP-201ENST00000355238 C7orf65Q6ZTY9 151 aa8.77□□□□□ -1.01
SYNCRIP-201ENST00000355238 MUC6Q6W4X9 2439 aa8.77□□□□□ -1.01
SYNCRIP-201ENST00000355238 LINC00336Q6ZUF6 198 aa8.76□□□□□ -1.01
SYNCRIP-201ENST00000355238 A8MUN3 132 aa8.76□□□□□ -1.01
SYNCRIP-201ENST00000355238 LINC00167Q96N53 147 aa8.75□□□□□ -1.01
SYNCRIP-201ENST00000355238 FSHBP01225 129 aa8.75□□□□□ -1.01
SYNCRIP-201ENST00000355238 OXLD1Q5BKU9 147 aa8.75□□□□□ -1.01
SYNCRIP-201ENST00000355238 PLA2G2AP14555 144 aa8.74□□□□□ -1.01
SYNCRIP-201ENST00000355238 BDP1A6H8Y1 2624 aa8.74□□□□□ -1.01
SYNCRIP-201ENST00000355238 IGKV2D-30A0A075B6S6 120 aa8.74□□□□□ -1.01
SYNCRIP-201ENST00000355238 IGKV2-30P06310 120 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms