RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 F8VRH5 84 aa7.57□□□□□ -1.2
RTN3-204ENST00000354497 H7C1H1 209 aa7.57□□□□□ -1.2
RTN3-204ENST00000354497 PSCAO43653 123 aa7.57□□□□□ -1.2
RTN3-204ENST00000354497 NDUFC2O95298 119 aa7.57□□□□□ -1.2
RTN3-204ENST00000354497 C4orf26Q17RF5 130 aa7.57□□□□□ -1.2
RTN3-204ENST00000354497 OTORQ9NRC9 128 aa7.57□□□□□ -1.2
RTN3-204ENST00000354497 TRAV13-1A0A0B4J241 112 aa7.56□□□□□ -1.2
RTN3-204ENST00000354497 PAX4O43316 350 aa7.56□□□□□ -1.2
RTN3-204ENST00000354497 TCRAP04437 139 aa7.56□□□□□ -1.2
RTN3-204ENST00000354497 ARMS2P0C7Q2 107 aa7.56□□□□□ -1.2
RTN3-204ENST00000354497 PAPPA-AS1Q5QFB9 102 aa7.56□□□□□ -1.2
RTN3-204ENST00000354497 Q86TA4 180 aa7.56□□□□□ -1.2
RTN3-204ENST00000354497 COPS9Q8WXC6 57 aa7.56□□□□□ -1.2
RTN3-204ENST00000354497 CNFNQ9BYD5 112 aa7.56□□□□□ -1.2
RTN3-204ENST00000354497 IGKV1OR2-108A0A075B7D4 117 aa7.55□□□□□ -1.2
RTN3-204ENST00000354497 H3BVH4 76 aa7.55□□□□□ -1.2
RTN3-204ENST00000354497 J3QQQ9 107 aa7.55□□□□□ -1.2
RTN3-204ENST00000354497 IGHV3-53P01767 116 aa7.55□□□□□ -1.2
RTN3-204ENST00000354497 MRPS36P82909 103 aaKnown RBP7.55□□□□□ -1.2
RTN3-204ENST00000354497 ZNF56Q15929 161 aa7.55□□□□□ -1.2
RTN3-204ENST00000354497 MRPL51Q4U2R6 128 aaKnown RBP7.55□□□□□ -1.2
RTN3-204ENST00000354497 THAP8Q8NA92 274 aa7.55□□□□□ -1.2
RTN3-204ENST00000354497 LINC00467Q9BRT7 94 aa7.55□□□□□ -1.2
RTN3-204ENST00000354497 TTTY13Q9BZ97 58 aa7.55□□□□□ -1.2
RTN3-204ENST00000354497 FAM30AQ9NZY2 134 aa7.55□□□□□ -1.2
RTN3-204ENST00000354497 FAT3Q8TDW7 4589 aa7.54□□□□□ -1.2
RTN3-204ENST00000354497 TRGV1A0A0A0MS02 117 aa7.54□□□□□ -1.2
RTN3-204ENST00000354497 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.54□□□□□ -1.2
RTN3-204ENST00000354497 MRPS12O15235 138 aaKnown RBP7.54□□□□□ -1.2
RTN3-204ENST00000354497 IGHV3-33P01772 117 aa7.54□□□□□ -1.2
RTN3-204ENST00000354497 CFC1BP0CG36 223 aa7.54□□□□□ -1.2
RTN3-204ENST00000354497 CFC1P0CG37 223 aa7.54□□□□□ -1.2
RTN3-204ENST00000354497 PFN2P35080 140 aa7.54□□□□□ -1.2
RTN3-204ENST00000354497 LYPD5Q6UWN5 251 aa7.54□□□□□ -1.2
RTN3-204ENST00000354497 SERP2Q8N6R1 65 aa7.54□□□□□ -1.2
RTN3-204ENST00000354497 TMEM75Q8N9X5 138 aa7.54□□□□□ -1.2
RTN3-204ENST00000354497 LINC00477Q96M19 166 aa7.54□□□□□ -1.2
RTN3-204ENST00000354497 LRP1Q07954 4544 aaKnown RBP7.54□□□□□ -1.2
RTN3-204ENST00000354497 TRAV12-3A0A0B4J271 114 aa7.53□□□□□ -1.2
RTN3-204ENST00000354497 H3BRN7 92 aa7.53□□□□□ -1.2
RTN3-204ENST00000354497 LEPP41159 167 aa7.53□□□□□ -1.2
RTN3-204ENST00000354497 C10orf113Q5VZT2 155 aa7.53□□□□□ -1.2
RTN3-204ENST00000354497 WFDC10BQ8IUB3 73 aa7.53□□□□□ -1.2
RTN3-204ENST00000354497 SLC25A29Q8N8R3 303 aa7.53□□□□□ -1.2
RTN3-204ENST00000354497 C1orf43Q9BWL3 253 aa7.53□□□□□ -1.2
RTN3-204ENST00000354497 MRPL35Q9NZE8 188 aaKnown RBP7.53□□□□□ -1.2
RTN3-204ENST00000354497 TMEM14CQ9P0S9 112 aa7.53□□□□□ -1.2
RTN3-204ENST00000354497 SERP1Q9Y6X1 66 aa7.53□□□□□ -1.2
RTN3-204ENST00000354497 IGHV3-30P01768 117 aa7.52□□□□□ -1.2
RTN3-204ENST00000354497 IGHV3-30-5P0DP03 117 aa7.52□□□□□ -1.2
RTN3-204ENST00000354497 DAZ2Q13117 558 aaKnown RBP7.52□□□□□ -1.2
RTN3-204ENST00000354497 SRSF9Q13242 221 aaKnown RBP eCLIP7.52□□□□□ -1.2
RTN3-204ENST00000354497 COX7A2P2O60397 106 aa7.52□□□□□ -1.21
RTN3-204ENST00000354497 BCE1O60756 84 aa7.52□□□□□ -1.21
RTN3-204ENST00000354497 OXTP01178 125 aa7.52□□□□□ -1.21
RTN3-204ENST00000354497 PYYP10082 97 aa7.52□□□□□ -1.21
RTN3-204ENST00000354497 CKS2P33552 79 aa7.52□□□□□ -1.21
RTN3-204ENST00000354497 C1orf195Q5TG92 126 aa7.52□□□□□ -1.21
RTN3-204ENST00000354497 DAND5Q8N907 189 aa7.52□□□□□ -1.21
RTN3-204ENST00000354497 C8orf49Q96NF6 230 aa7.52□□□□□ -1.21
RTN3-204ENST00000354497 TMSB15BA0A087X1C1 80 aa7.51□□□□□ -1.21
RTN3-204ENST00000354497 TEX49A0A1B0GTD5 131 aa7.51□□□□□ -1.21
RTN3-204ENST00000354497 IGLV2-11P01706 119 aa7.51□□□□□ -1.21
RTN3-204ENST00000354497 RPL18AQ02543 176 aaKnown RBP7.51□□□□□ -1.21
RTN3-204ENST00000354497 Q8N814 137 aa7.51□□□□□ -1.21
RTN3-204ENST00000354497 FAM19A4Q96LR4 140 aa7.51□□□□□ -1.21
RTN3-204ENST00000354497 DPH3P1Q9H4G8 78 aa7.51□□□□□ -1.21
RTN3-204ENST00000354497 LAMTOR3Q9UHA4 124 aa7.51□□□□□ -1.21
RTN3-204ENST00000354497 PRAC2D3DTV9 90 aa7.5□□□□□ -1.21
RTN3-204ENST00000354497 H3BTX0 84 aa7.5□□□□□ -1.21
RTN3-204ENST00000354497 C2orf82Q6UX34 121 aa7.5□□□□□ -1.21
RTN3-204ENST00000354497 NEXN-AS1Q8NBZ9 246 aa7.5□□□□□ -1.21
RTN3-204ENST00000354497 PRO0255Q9UI72 69 aa7.5□□□□□ -1.21
RTN3-204ENST00000354497 SMIM26A0A096LP01 95 aa7.49□□□□□ -1.21
RTN3-204ENST00000354497 LOC389332A0A1B0GUA5 103 aa7.49□□□□□ -1.21
RTN3-204ENST00000354497 LRCOL1A6NCL2 159 aa7.49□□□□□ -1.21
RTN3-204ENST00000354497 Q9HAA7 133 aa7.49□□□□□ -1.21
RTN3-204ENST00000354497 hADV29S1A0JD25 119 aa7.48□□□□□ -1.21
RTN3-204ENST00000354497 ZNF815PA8K554 130 aa7.48□□□□□ -1.21
RTN3-204ENST00000354497 H3BS24 57 aa7.48□□□□□ -1.21
RTN3-204ENST00000354497 HERVK_113P61574 105 aa7.48□□□□□ -1.21
RTN3-204ENST00000354497 LAGE3Q14657 143 aa7.48□□□□□ -1.21
RTN3-204ENST00000354497 PATE2Q6UY27 113 aa7.48□□□□□ -1.21
RTN3-204ENST00000354497 TRGV4A0A0C4DH28 118 aa7.47□□□□□ -1.21
RTN3-204ENST00000354497 COX6CP09669 75 aa7.47□□□□□ -1.21
RTN3-204ENST00000354497 NPC2P61916 151 aa7.47□□□□□ -1.21
RTN3-204ENST00000354497 SCGB1D4Q6XE38 83 aa7.47□□□□□ -1.21
RTN3-204ENST00000354497 C11orf72Q8NBR9 251 aa7.47□□□□□ -1.21
RTN3-204ENST00000354497 SLC50A1Q9BRV3 221 aa7.47□□□□□ -1.21
RTN3-204ENST00000354497 KRTAP4-8Q9BYQ9 185 aa7.47□□□□□ -1.21
RTN3-204ENST00000354497 H7C423 109 aa7.46□□□□□ -1.21
RTN3-204ENST00000354497 RNF185Q96GF1 192 aa7.46□□□□□ -1.21
RTN3-204ENST00000354497 RNF213Q63HN8 5207 aa7.46□□□□□ -1.22
RTN3-204ENST00000354497 K7EQD1 137 aa7.45□□□□□ -1.22
RTN3-204ENST00000354497 GYPEP15421 78 aa7.45□□□□□ -1.22
RTN3-204ENST00000354497 FHL2Q14192 279 aa7.45□□□□□ -1.22
RTN3-204ENST00000354497 ORMDL2Q53FV1 153 aa7.45□□□□□ -1.22
RTN3-204ENST00000354497 MORN5Q5VZ52 161 aa7.45□□□□□ -1.22
RTN3-204ENST00000354497 LYZL1Q6UWQ5 148 aa7.45□□□□□ -1.22
RTN3-204ENST00000354497 LST1O00453 97 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms