RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 LYPD5Q6UWN5 251 aa8.69□□□□□ -1.02
TRERF1-202ENST00000354325 NOP10Q9NPE3 64 aaKnown RBP8.69□□□□□ -1.02
TRERF1-202ENST00000354325 TRBV6-8A0A0A6YYG3 113 aa8.68□□□□□ -1.02
TRERF1-202ENST00000354325 C10orf99Q6UWK7 81 aa8.68□□□□□ -1.02
TRERF1-202ENST00000354325 CFAP47Q6ZTR5 3102 aa8.68□□□□□ -1.02
TRERF1-202ENST00000354325 ATMQ13315 3056 aa8.68□□□□□ -1.02
TRERF1-202ENST00000354325 PRM2P04554 102 aa8.68□□□□□ -1.02
TRERF1-202ENST00000354325 ZNF843Q8N446 348 aa8.68□□□□□ -1.02
TRERF1-202ENST00000354325 C11orf68Q9H3H3 251 aaKnown RBP8.68□□□□□ -1.02
TRERF1-202ENST00000354325 C1orf43Q9BWL3 253 aa8.67□□□□□ -1.02
TRERF1-202ENST00000354325 ZZEF1O43149 2961 aa8.67□□□□□ -1.02
TRERF1-202ENST00000354325 FAM19A1Q7Z5A9 133 aa8.67□□□□□ -1.02
TRERF1-202ENST00000354325 HILS1P60008 231 aa8.67□□□□□ -1.02
TRERF1-202ENST00000354325 CFAP46Q8IYW2 2715 aa8.66□□□□□ -1.02
TRERF1-202ENST00000354325 CXCL6P80162 114 aa8.66□□□□□ -1.02
TRERF1-202ENST00000354325 LOC110117498A0A087WWA1 95 aa8.66□□□□□ -1.02
TRERF1-202ENST00000354325 HTN3P15516 51 aa8.66□□□□□ -1.02
TRERF1-202ENST00000354325 KLKP1Q107X0 134 aa8.65□□□□□ -1.02
TRERF1-202ENST00000354325 Q5XG85 94 aa8.65□□□□□ -1.02
TRERF1-202ENST00000354325 WFDC11Q8NEX6 87 aa8.65□□□□□ -1.02
TRERF1-202ENST00000354325 IL17DQ8TAD2 202 aa8.65□□□□□ -1.02
TRERF1-202ENST00000354325 KRTAP10-9P60411 292 aa8.65□□□□□ -1.02
TRERF1-202ENST00000354325 LINC00959A0A1B0GUT2 108 aa8.65□□□□□ -1.03
TRERF1-202ENST00000354325 C1orf158Q8N1D5 194 aa8.65□□□□□ -1.03
TRERF1-202ENST00000354325 ZNF702PQ9H963 129 aa8.65□□□□□ -1.03
TRERF1-202ENST00000354325 AVPP01185 164 aa8.64□□□□□ -1.03
TRERF1-202ENST00000354325 CYSTM1Q9H1C7 97 aa8.64□□□□□ -1.03
TRERF1-202ENST00000354325 C9orf129Q5T035 196 aaKnown RBP8.64□□□□□ -1.03
TRERF1-202ENST00000354325 WFDC9Q8NEX5 89 aa8.63□□□□□ -1.03
TRERF1-202ENST00000354325 BBC3Q96PG8 261 aaPredicted RBP8.63□□□□□ -1.03
TRERF1-202ENST00000354325 Q6YL49 198 aa8.62□□□□□ -1.03
TRERF1-202ENST00000354325 C6orf99Q4VX62 202 aa8.62□□□□□ -1.03
TRERF1-202ENST00000354325 LINC00482Q8N8I6 264 aa8.62□□□□□ -1.03
TRERF1-202ENST00000354325 LINC01547P58512 204 aaPredicted RBP8.61□□□□□ -1.03
TRERF1-202ENST00000354325 H7BZZ5 65 aa8.61□□□□□ -1.03
TRERF1-202ENST00000354325 LINC00575Q6W349 94 aa8.61□□□□□ -1.03
TRERF1-202ENST00000354325 WDFY3Q8IZQ1 3526 aa8.61□□□□□ -1.03
TRERF1-202ENST00000354325 F8WEM9 126 aa8.61□□□□□ -1.03
TRERF1-202ENST00000354325 Q6ZQT0 140 aa8.61□□□□□ -1.03
TRERF1-202ENST00000354325 C6orf223Q8N319 242 aa8.6□□□□□ -1.03
TRERF1-202ENST00000354325 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
TRERF1-202ENST00000354325 IGLV4-60A0A075B6I1 120 aa8.59□□□□□ -1.03
TRERF1-202ENST00000354325 A0A1B0GUV1 79 aa8.59□□□□□ -1.03
TRERF1-202ENST00000354325 Q6ZVQ6 151 aa8.59□□□□□ -1.03
TRERF1-202ENST00000354325 OXTP01178 125 aa8.59□□□□□ -1.03
TRERF1-202ENST00000354325 MIFP14174 115 aa8.59□□□□□ -1.03
TRERF1-202ENST00000354325 ERC2-IT1O76042 136 aa8.58□□□□□ -1.04
TRERF1-202ENST00000354325 IGHV4-31P0DP07 118 aa8.58□□□□□ -1.04
TRERF1-202ENST00000354325 COL12A1Q99715 3063 aa8.58□□□□□ -1.04
TRERF1-202ENST00000354325 DEFB130BP0DP73 79 aa8.58□□□□□ -1.04
TRERF1-202ENST00000354325 DEFB130AP0DP74 79 aa8.58□□□□□ -1.04
TRERF1-202ENST00000354325 CD164L2Q6UWJ8 174 aa8.57□□□□□ -1.04
TRERF1-202ENST00000354325 CCL24O00175 119 aa8.56□□□□□ -1.04
TRERF1-202ENST00000354325 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.56□□□□□ -1.04
TRERF1-202ENST00000354325 DIRC1Q969H9 104 aa8.56□□□□□ -1.04
TRERF1-202ENST00000354325 FLNCQ14315 2725 aa8.56□□□□□ -1.04
TRERF1-202ENST00000354325 FLNAP21333 2647 aaKnown RBP8.56□□□□□ -1.04
TRERF1-202ENST00000354325 SNURFQ9Y675 71 aa8.56□□□□□ -1.04
TRERF1-202ENST00000354325 TRBV7-6A0A0J9YX20 115 aa8.55□□□□□ -1.04
TRERF1-202ENST00000354325 EPM2AB3EWF7 344 aa8.55□□□□□ -1.04
TRERF1-202ENST00000354325 LOC100131303A0A0U1RQF7 123 aa8.55□□□□□ -1.04
TRERF1-202ENST00000354325 C9orf66Q5T8R8 295 aa8.55□□□□□ -1.04
TRERF1-202ENST00000354325 Q8N3U1 123 aa8.55□□□□□ -1.04
TRERF1-202ENST00000354325 KALRNO60229 2985 aa8.55□□□□□ -1.04
TRERF1-202ENST00000354325 HELZ2Q9BYK8 2649 aaKnown RBP8.54□□□□□ -1.04
TRERF1-202ENST00000354325 NREPQ16612 68 aa8.54□□□□□ -1.04
TRERF1-202ENST00000354325 DMDP11532 3685 aa8.54□□□□□ -1.04
TRERF1-202ENST00000354325 GYPEP15421 78 aa8.54□□□□□ -1.04
TRERF1-202ENST00000354325 ITPR3Q14573 2671 aa8.54□□□□□ -1.04
TRERF1-202ENST00000354325 RMI2Q96E14 147 aa8.54□□□□□ -1.04
TRERF1-202ENST00000354325 BRK1Q8WUW1 75 aa8.53□□□□□ -1.04
TRERF1-202ENST00000354325 USP24Q9UPU5 2620 aa8.53□□□□□ -1.04
TRERF1-202ENST00000354325 IGHV4-28A0A0C4DH34 117 aa8.52□□□□□ -1.04
TRERF1-202ENST00000354325 Q6ZQY7 126 aa8.52□□□□□ -1.04
TRERF1-202ENST00000354325 F8P00451 2351 aa8.52□□□□□ -1.04
TRERF1-202ENST00000354325 DNAJC9-AS1A6NH13 148 aa8.52□□□□□ -1.05
TRERF1-202ENST00000354325 C18orf65Q6ZTR6 163 aa8.52□□□□□ -1.05
TRERF1-202ENST00000354325 LINC00336Q6ZUF6 198 aa8.52□□□□□ -1.05
TRERF1-202ENST00000354325 IGSF10Q6WRI0 2623 aa8.52□□□□□ -1.05
TRERF1-202ENST00000354325 V9GYY9 64 aa8.52□□□□□ -1.05
TRERF1-202ENST00000354325 COX7BP24311 80 aa8.52□□□□□ -1.05
TRERF1-202ENST00000354325 FUSP35637 526 aaKnown RBP eCLIP8.52□□□□□ -1.05
TRERF1-202ENST00000354325 TMEM254Q8TBM7 123 aa8.52□□□□□ -1.05
TRERF1-202ENST00000354325 PRO0255Q9UI72 69 aa8.52□□□□□ -1.05
TRERF1-202ENST00000354325 BPY2O14599 106 aa8.51□□□□□ -1.05
TRERF1-202ENST00000354325 ASPMQ8IZT6 3477 aa8.51□□□□□ -1.05
TRERF1-202ENST00000354325 LRBAP50851 2863 aa8.51□□□□□ -1.05
TRERF1-202ENST00000354325 CHCHD10Q8WYQ3 142 aaPredicted RBP8.51□□□□□ -1.05
TRERF1-202ENST00000354325 TACC2O95359 2948 aa8.51□□□□□ -1.05
TRERF1-202ENST00000354325 C1orf195Q5TG92 126 aa8.5□□□□□ -1.05
TRERF1-202ENST00000354325 ANGP03950 147 aaKnown RBP8.5□□□□□ -1.05
TRERF1-202ENST00000354325 SPAG11BQ08648 103 aa8.5□□□□□ -1.05
TRERF1-202ENST00000354325 PKIGQ9Y2B9 76 aa8.5□□□□□ -1.05
TRERF1-202ENST00000354325 NANOS2P60321 138 aaKnown RBP8.49□□□□□ -1.05
TRERF1-202ENST00000354325 TRAV10A0A0B4J240 114 aa8.49□□□□□ -1.05
TRERF1-202ENST00000354325 PRR3P79522 188 aaKnown RBP8.49□□□□□ -1.05
TRERF1-202ENST00000354325 CLPSL2Q6UWE3 100 aa8.49□□□□□ -1.05
TRERF1-202ENST00000354325 F8WDY8 70 aa8.48□□□□□ -1.05
TRERF1-202ENST00000354325 SMR3AQ99954 134 aa8.48□□□□□ -1.05
TRERF1-202ENST00000354325 A0A096LPF7 62 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms