RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 CKS1BP61024 79 aa13.72□□□□□ -0.21
TRIM4-202ENST00000354241 SPAG11BQ08648 103 aa13.72□□□□□ -0.21
TRIM4-202ENST00000354241 SPANXDQ9BXN6 97 aa13.72□□□□□ -0.21
TRIM4-202ENST00000354241 SPANXCQ9NY87 97 aa13.72□□□□□ -0.21
TRIM4-202ENST00000354241 SFTA2Q6UW10 78 aa13.72□□□□□ -0.21
TRIM4-202ENST00000354241 C2orf82Q6UX34 121 aa13.72□□□□□ -0.21
TRIM4-202ENST00000354241 DAND5Q8N907 189 aa13.72□□□□□ -0.21
TRIM4-202ENST00000354241 NHP2Q9NX24 153 aaKnown RBP13.71□□□□□ -0.21
TRIM4-202ENST00000354241 SMIM13P0DJ93 91 aa13.7□□□□□ -0.22
TRIM4-202ENST00000354241 NPC2P61916 151 aa13.7□□□□□ -0.22
TRIM4-202ENST00000354241 MUSTN1Q8IVN3 82 aa13.7□□□□□ -0.22
TRIM4-202ENST00000354241 FBN3Q75N90 2809 aa13.7□□□□□ -0.22
TRIM4-202ENST00000354241 VAMP3Q15836 100 aa13.7□□□□□ -0.22
TRIM4-202ENST00000354241 CXCL5P42830 114 aa13.69□□□□□ -0.22
TRIM4-202ENST00000354241 TMEM238LA0A1B0GVL6 79 aa13.68□□□□□ -0.22
TRIM4-202ENST00000354241 A6NJY4 79 aa13.68□□□□□ -0.22
TRIM4-202ENST00000354241 LINC00526Q96FQ7 95 aa13.68□□□□□ -0.22
TRIM4-202ENST00000354241 C6orf223Q8N319 242 aa13.68□□□□□ -0.22
TRIM4-202ENST00000354241 MUC7Q8TAX7 377 aa13.68□□□□□ -0.22
TRIM4-202ENST00000354241 RMI2Q96E14 147 aa13.68□□□□□ -0.22
TRIM4-202ENST00000354241 CBY1Q9Y3M2 126 aa13.68□□□□□ -0.22
TRIM4-202ENST00000354241 K7ERJ3 54 aa13.67□□□□□ -0.22
TRIM4-202ENST00000354241 PLECQ15149 4684 aaKnown RBP13.67□□□□□ -0.22
TRIM4-202ENST00000354241 LYSTQ99698 3801 aa13.67□□□□□ -0.22
TRIM4-202ENST00000354241 STARD9Q9P2P6 4700 aa13.67□□□□□ -0.22
TRIM4-202ENST00000354241 HIGD2BQ4VC39 106 aa13.66□□□□□ -0.22
TRIM4-202ENST00000354241 KRTAP1-5Q9BYS1 174 aa13.66□□□□□ -0.22
TRIM4-202ENST00000354241 LINC00158P58513 81 aa13.66□□□□□ -0.22
TRIM4-202ENST00000354241 RPL24P83731 157 aaKnown RBP13.66□□□□□ -0.22
TRIM4-202ENST00000354241 ERG28Q9UKR5 140 aa13.66□□□□□ -0.22
TRIM4-202ENST00000354241 PFN2P35080 140 aa13.65□□□□□ -0.22
TRIM4-202ENST00000354241 RAB37Q96AX2 223 aa13.65□□□□□ -0.22
TRIM4-202ENST00000354241 A4D1N5 150 aa13.64□□□□□ -0.23
TRIM4-202ENST00000354241 C15orf56Q8N910 161 aa13.64□□□□□ -0.23
TRIM4-202ENST00000354241 ZNF561-AS1K7EIQ3 104 aa13.64□□□□□ -0.23
TRIM4-202ENST00000354241 IFITM1P13164 125 aa13.63□□□□□ -0.23
TRIM4-202ENST00000354241 MIR7-3HGQ8N6C7 128 aa13.63□□□□□ -0.23
TRIM4-202ENST00000354241 LINC00308Q8TCZ7 52 aa13.63□□□□□ -0.23
TRIM4-202ENST00000354241 UNQ6190/PRO20217Q6UXQ8 127 aa13.62□□□□□ -0.23
TRIM4-202ENST00000354241 NTN5Q8WTR8 489 aaPredicted RBP13.62□□□□□ -0.23
TRIM4-202ENST00000354241 WWC2-AS2Q96NR7 200 aa13.62□□□□□ -0.23
TRIM4-202ENST00000354241 DNAH1Q9P2D7 4330 aa13.62□□□□□ -0.23
TRIM4-202ENST00000354241 EIF4EBP3O60516 100 aaPredicted RBP13.62□□□□□ -0.23
TRIM4-202ENST00000354241 CASC10Q5T4H9 136 aa13.61□□□□□ -0.23
TRIM4-202ENST00000354241 C10orf25Q5T742 122 aa13.61□□□□□ -0.23
TRIM4-202ENST00000354241 A0A1B0GWB2 263 aa13.6□□□□□ -0.23
TRIM4-202ENST00000354241 CFC1BP0CG36 223 aa13.59□□□□□ -0.23
TRIM4-202ENST00000354241 CFC1P0CG37 223 aa13.59□□□□□ -0.23
TRIM4-202ENST00000354241 C9orf116Q5BN46 136 aaPredicted RBP13.59□□□□□ -0.23
TRIM4-202ENST00000354241 SOSTDC1Q6X4U4 206 aa13.59□□□□□ -0.23
TRIM4-202ENST00000354241 COPS9Q8WXC6 57 aa13.59□□□□□ -0.23
TRIM4-202ENST00000354241 TTC32Q5I0X7 151 aa13.58□□□□□ -0.23
TRIM4-202ENST00000354241 CAMK2N2Q96S95 79 aa13.58□□□□□ -0.23
TRIM4-202ENST00000354241 GVQW2A0A096LPI5 108 aaPredicted RBP13.58□□□□□ -0.24
TRIM4-202ENST00000354241 NBDYA0A0U1RRE5 68 aa13.58□□□□□ -0.24
TRIM4-202ENST00000354241 C9orf118A6NHY6 69 aa13.58□□□□□ -0.24
TRIM4-202ENST00000354241 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.57□□□□□ -0.24
TRIM4-202ENST00000354241 NAA38Q9BRA0 125 aaKnown RBP13.56□□□□□ -0.24
TRIM4-202ENST00000354241 USP17L23D6RBM5 183 aa13.56□□□□□ -0.24
TRIM4-202ENST00000354241 COX17Q14061 63 aa13.56□□□□□ -0.24
TRIM4-202ENST00000354241 C2orf48Q96LS8 159 aa13.56□□□□□ -0.24
TRIM4-202ENST00000354241 C6orf48Q9UBA6 75 aa13.55□□□□□ -0.24
TRIM4-202ENST00000354241 TENM2Q9NT68 2774 aa13.54□□□□□ -0.24
TRIM4-202ENST00000354241 A0A0B4J2C4 111 aa13.54□□□□□ -0.24
TRIM4-202ENST00000354241 H3BUT2 72 aa13.54□□□□□ -0.24
TRIM4-202ENST00000354241 LECT2O14960 151 aa13.54□□□□□ -0.24
TRIM4-202ENST00000354241 PSCAO43653 123 aa13.54□□□□□ -0.24
TRIM4-202ENST00000354241 Q6ZRU5 148 aa13.53□□□□□ -0.24
TRIM4-202ENST00000354241 GTF2H5Q6ZYL4 71 aa13.52□□□□□ -0.24
TRIM4-202ENST00000354241 PRO1854Q9UHT4 67 aa13.52□□□□□ -0.24
TRIM4-202ENST00000354241 TRBV30A0A0K0K1B3 111 aa13.52□□□□□ -0.25
TRIM4-202ENST00000354241 PGPEP1Q9NXJ5 209 aa13.52□□□□□ -0.25
TRIM4-202ENST00000354241 GAGE10A6NGK3 116 aa13.51□□□□□ -0.25
TRIM4-202ENST00000354241 M0R2N4 97 aa13.51□□□□□ -0.25
TRIM4-202ENST00000354241 PPDPFQ9H3Y8 114 aa13.51□□□□□ -0.25
TRIM4-202ENST00000354241 TGP01266 2768 aa13.51□□□□□ -0.25
TRIM4-202ENST00000354241 F8WDY8 70 aa13.51□□□□□ -0.25
TRIM4-202ENST00000354241 SYCNQ0VAF6 134 aa13.5□□□□□ -0.25
TRIM4-202ENST00000354241 SND1-IT1Q9HBX3 110 aa13.5□□□□□ -0.25
TRIM4-202ENST00000354241 VPS13DQ5THJ4 4388 aa13.49□□□□□ -0.25
TRIM4-202ENST00000354241 TSPAN13O95857 204 aa13.49□□□□□ -0.25
TRIM4-202ENST00000354241 OCIAD2Q56VL3 154 aa13.49□□□□□ -0.25
TRIM4-202ENST00000354241 K7EP34 96 aa13.48□□□□□ -0.25
TRIM4-202ENST00000354241 H7C2G1 150 aa13.47□□□□□ -0.25
TRIM4-202ENST00000354241 WFDC2Q14508 124 aa13.47□□□□□ -0.25
TRIM4-202ENST00000354241 A0A1W2PPM0 123 aa13.46□□□□□ -0.25
TRIM4-202ENST00000354241 LY6G6CO95867 125 aa13.46□□□□□ -0.25
TRIM4-202ENST00000354241 CARD19Q96LW7 228 aa13.46□□□□□ -0.25
TRIM4-202ENST00000354241 C3orf84H3BNL1 204 aa13.45□□□□□ -0.26
TRIM4-202ENST00000354241 LOC107984156A0A0G2JMH3 177 aa13.44□□□□□ -0.26
TRIM4-202ENST00000354241 SLPIP03973 132 aa13.44□□□□□ -0.26
TRIM4-202ENST00000354241 Q1RN00 199 aa13.44□□□□□ -0.26
TRIM4-202ENST00000354241 ARL17AQ8IVW1 177 aa13.44□□□□□ -0.26
TRIM4-202ENST00000354241 RPL13AP40429 203 aaKnown RBP13.43□□□□□ -0.26
TRIM4-202ENST00000354241 FABP2P12104 132 aa13.43□□□□□ -0.26
TRIM4-202ENST00000354241 K7ERU9 68 aa13.42□□□□□ -0.26
TRIM4-202ENST00000354241 DNAH10Q8IVF4 4471 aa13.42□□□□□ -0.26
TRIM4-202ENST00000354241 IGKV2-28A0A075B6P5 120 aa13.41□□□□□ -0.26
TRIM4-202ENST00000354241 NDUFC2-KCTD14E9PQ53 114 aa13.41□□□□□ -0.26
TRIM4-202ENST00000354241 IGKV2D-28P01615 120 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms