RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 KRTAP1-3Q8IUG1 177 aa8.7□□□□□ -1.02
SMAD9-201ENST00000350148 LINC01561Q8N1V8 128 aa8.7□□□□□ -1.02
SMAD9-201ENST00000350148 NANOS2P60321 138 aaKnown RBP8.69□□□□□ -1.02
SMAD9-201ENST00000350148 CFAP54Q96N23 3096 aa8.69□□□□□ -1.02
SMAD9-201ENST00000350148 PRR4Q16378 134 aa8.69□□□□□ -1.02
SMAD9-201ENST00000350148 PRM2P04554 102 aa8.69□□□□□ -1.02
SMAD9-201ENST00000350148 LOC100131303A0A0U1RQF7 123 aa8.68□□□□□ -1.02
SMAD9-201ENST00000350148 CASC2Q6XLA1 102 aa8.68□□□□□ -1.02
SMAD9-201ENST00000350148 LINC00315P59091 139 aa8.68□□□□□ -1.02
SMAD9-201ENST00000350148 A0A1B0GUV1 79 aa8.68□□□□□ -1.02
SMAD9-201ENST00000350148 NCR3O14931 201 aa8.67□□□□□ -1.02
SMAD9-201ENST00000350148 COX17Q14061 63 aa8.67□□□□□ -1.02
SMAD9-201ENST00000350148 WNK1Q9H4A3 2382 aa8.67□□□□□ -1.02
SMAD9-201ENST00000350148 Q8IZM0 81 aa8.67□□□□□ -1.02
SMAD9-201ENST00000350148 LINC00308Q8TCZ7 52 aa8.67□□□□□ -1.02
SMAD9-201ENST00000350148 USP9XQ93008 2570 aaPredicted RBP8.67□□□□□ -1.02
SMAD9-201ENST00000350148 LAMA1P25391 3075 aa8.66□□□□□ -1.02
SMAD9-201ENST00000350148 IGLV4-69A0A075B6H9 119 aa8.66□□□□□ -1.02
SMAD9-201ENST00000350148 TRBV7-6A0A0J9YX20 115 aa8.66□□□□□ -1.02
SMAD9-201ENST00000350148 ETDCA0A1B0GVM5 59 aa8.66□□□□□ -1.02
SMAD9-201ENST00000350148 CDIP1Q9H305 208 aa8.65□□□□□ -1.02
SMAD9-201ENST00000350148 LRRK2Q5S007 2527 aa8.65□□□□□ -1.02
SMAD9-201ENST00000350148 A0A0J9YWU9 116 aa8.65□□□□□ -1.02
SMAD9-201ENST00000350148 LINC00242Q5T6M2 205 aa8.65□□□□□ -1.02
SMAD9-201ENST00000350148 DIRC1Q969H9 104 aa8.65□□□□□ -1.02
SMAD9-201ENST00000350148 VPS13AQ96RL7 3174 aa8.65□□□□□ -1.03
SMAD9-201ENST00000350148 USP9YO00507 2555 aaPredicted RBP8.65□□□□□ -1.03
SMAD9-201ENST00000350148 LST1O00453 97 aa8.64□□□□□ -1.03
SMAD9-201ENST00000350148 A8MZ25 164 aa8.64□□□□□ -1.03
SMAD9-201ENST00000350148 SONP18583 2426 aaKnown RBP8.63□□□□□ -1.03
SMAD9-201ENST00000350148 ANKRD17O75179 2603 aaKnown RBP8.63□□□□□ -1.03
SMAD9-201ENST00000350148 A0A087WZ39 114 aa8.63□□□□□ -1.03
SMAD9-201ENST00000350148 NACAE9PAV3 2078 aa8.62□□□□□ -1.03
SMAD9-201ENST00000350148 H3BNG1 76 aa8.62□□□□□ -1.03
SMAD9-201ENST00000350148 IGKV4-1P06312 121 aa8.62□□□□□ -1.03
SMAD9-201ENST00000350148 Q6ZSN1 163 aa8.62□□□□□ -1.03
SMAD9-201ENST00000350148 MYO9AB2RTY4 2548 aa8.62□□□□□ -1.03
SMAD9-201ENST00000350148 WDFY3Q8IZQ1 3526 aa8.62□□□□□ -1.03
SMAD9-201ENST00000350148 NHLRC4P0CG21 123 aaPredicted RBP8.62□□□□□ -1.03
SMAD9-201ENST00000350148 A0A087WVE0 104 aa8.61□□□□□ -1.03
SMAD9-201ENST00000350148 NUPR2A6NF83 97 aa8.61□□□□□ -1.03
SMAD9-201ENST00000350148 SYCNQ0VAF6 134 aa8.61□□□□□ -1.03
SMAD9-201ENST00000350148 TRIOO75962 3097 aa8.61□□□□□ -1.03
SMAD9-201ENST00000350148 ZNF292O60281 2723 aa8.6□□□□□ -1.03
SMAD9-201ENST00000350148 SLPIP03973 132 aa8.6□□□□□ -1.03
SMAD9-201ENST00000350148 CRYGAP11844 174 aa8.6□□□□□ -1.03
SMAD9-201ENST00000350148 SMIM1B2RUZ4 78 aa8.6□□□□□ -1.03
SMAD9-201ENST00000350148 KRTAP1-1Q07627 177 aa8.6□□□□□ -1.03
SMAD9-201ENST00000350148 KRTAP24-1Q3LI83 254 aa8.6□□□□□ -1.03
SMAD9-201ENST00000350148 SMCPP49901 116 aaPredicted RBP8.6□□□□□ -1.03
SMAD9-201ENST00000350148 PRYO14603 147 aa8.59□□□□□ -1.03
SMAD9-201ENST00000350148 CD164Q04900 197 aa8.59□□□□□ -1.03
SMAD9-201ENST00000350148 PRUNE2Q8WUY3 3088 aa8.59□□□□□ -1.03
SMAD9-201ENST00000350148 ESRGQ1W209 222 aa8.59□□□□□ -1.03
SMAD9-201ENST00000350148 COX7BP24311 80 aa8.59□□□□□ -1.03
SMAD9-201ENST00000350148 CXCL6P80162 114 aa8.59□□□□□ -1.03
SMAD9-201ENST00000350148 PLAC8L1A1L4L8 177 aa8.58□□□□□ -1.04
SMAD9-201ENST00000350148 TRBV7-7A0A0K0K1E9 115 aa8.58□□□□□ -1.04
SMAD9-201ENST00000350148 X6R8D5 127 aa8.58□□□□□ -1.04
SMAD9-201ENST00000350148 ABCA12Q86UK0 2595 aa8.57□□□□□ -1.04
SMAD9-201ENST00000350148 SORL1Q92673 2214 aa8.57□□□□□ -1.04
SMAD9-201ENST00000350148 EYSQ5T1H1 3165 aa8.57□□□□□ -1.04
SMAD9-201ENST00000350148 H0Y9J4 135 aa8.57□□□□□ -1.04
SMAD9-201ENST00000350148 Q6ZTC4 211 aa8.56□□□□□ -1.04
SMAD9-201ENST00000350148 ZFYVE26Q68DK2 2539 aa8.56□□□□□ -1.04
SMAD9-201ENST00000350148 LYPD5Q6UWN5 251 aa8.55□□□□□ -1.04
SMAD9-201ENST00000350148 IGLV4-60A0A075B6I1 120 aa8.55□□□□□ -1.04
SMAD9-201ENST00000350148 EGFEM1PQ0D2K5 195 aa8.55□□□□□ -1.04
SMAD9-201ENST00000350148 TSPEAR-AS2P59090 65 aa8.55□□□□□ -1.04
SMAD9-201ENST00000350148 PRO0461Q9UI25 63 aa8.55□□□□□ -1.04
SMAD9-201ENST00000350148 AGRNO00468 2067 aa8.55□□□□□ -1.04
SMAD9-201ENST00000350148 EPG5Q9HCE0 2579 aa8.54□□□□□ -1.04
SMAD9-201ENST00000350148 M0R378 163 aa8.54□□□□□ -1.04
SMAD9-201ENST00000350148 PRRC2CQ9Y520 2896 aaKnown RBP8.54□□□□□ -1.04
SMAD9-201ENST00000350148 C2orf48Q96LS8 159 aa8.53□□□□□ -1.04
SMAD9-201ENST00000350148 Q8N9L7 120 aa8.53□□□□□ -1.04
SMAD9-201ENST00000350148 FAM30AQ9NZY2 134 aa8.53□□□□□ -1.04
SMAD9-201ENST00000350148 IGLV5-45A0A087WSX0 123 aa8.53□□□□□ -1.04
SMAD9-201ENST00000350148 WFDC10BQ8IUB3 73 aa8.53□□□□□ -1.04
SMAD9-201ENST00000350148 COX6A2Q02221 97 aa8.52□□□□□ -1.04
SMAD9-201ENST00000350148 IGLV5-39A0A0G2JS06 123 aa8.52□□□□□ -1.05
SMAD9-201ENST00000350148 FREM2Q5SZK8 3169 aa8.51□□□□□ -1.05
SMAD9-201ENST00000350148 CELA1Q9UNI1 258 aa8.51□□□□□ -1.05
SMAD9-201ENST00000350148 CCKP06307 115 aa8.51□□□□□ -1.05
SMAD9-201ENST00000350148 TLN2Q9Y4G6 2542 aa8.51□□□□□ -1.05
SMAD9-201ENST00000350148 CSNK1G2-AS1Q8NCQ2 148 aa8.51□□□□□ -1.05
SMAD9-201ENST00000350148 ABCA2Q9BZC7 2435 aa8.51□□□□□ -1.05
SMAD9-201ENST00000350148 Q8NAQ8 132 aa8.5□□□□□ -1.05
SMAD9-201ENST00000350148 LINC00474Q9P2X8 69 aa8.5□□□□□ -1.05
SMAD9-201ENST00000350148 CYSRT1A8MQ03 144 aa8.5□□□□□ -1.05
SMAD9-201ENST00000350148 NTM-AS1Q6ZSK4 140 aa8.5□□□□□ -1.05
SMAD9-201ENST00000350148 B9D2Q9BPU9 175 aa8.49□□□□□ -1.05
SMAD9-201ENST00000350148 LIMD2Q9BT23 127 aa8.49□□□□□ -1.05
SMAD9-201ENST00000350148 C4orf48Q5BLP8 95 aa8.49□□□□□ -1.05
SMAD9-201ENST00000350148 TMEM254Q8TBM7 123 aa8.49□□□□□ -1.05
SMAD9-201ENST00000350148 C19orf73Q9NVV2 129 aa8.49□□□□□ -1.05
SMAD9-201ENST00000350148 LINC01556Q5JQF7 62 aa8.48□□□□□ -1.05
SMAD9-201ENST00000350148 COL6A3P12111 3177 aa8.47□□□□□ -1.05
SMAD9-201ENST00000350148 MDFIQ99750 246 aa8.47□□□□□ -1.05
SMAD9-201ENST00000350148 DHRS4-AS1Q9P1J3 65 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms