RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 LINC01561Q8N1V8 128 aa5.47□□□□□ -1.53
UBE2D3-204ENST00000349311 DEFB104AQ8WTQ1 72 aa5.47□□□□□ -1.53
UBE2D3-204ENST00000349311 VPS13CQ709C8 3753 aa5.47□□□□□ -1.53
UBE2D3-204ENST00000349311 ITPR3Q14573 2671 aa5.47□□□□□ -1.53
UBE2D3-204ENST00000349311 ZANQ9Y493 2812 aa5.46□□□□□ -1.54
UBE2D3-204ENST00000349311 IGHV1OR15-1A0A075B7D0 117 aa5.46□□□□□ -1.54
UBE2D3-204ENST00000349311 IGHV4-30-2A0A087WSY4 118 aa5.46□□□□□ -1.54
UBE2D3-204ENST00000349311 B4DSR2 109 aa5.46□□□□□ -1.54
UBE2D3-204ENST00000349311 DEFB113Q30KQ7 82 aa5.46□□□□□ -1.54
UBE2D3-204ENST00000349311 Q8N2B8 174 aa5.46□□□□□ -1.54
UBE2D3-204ENST00000349311 Q9H8V8 135 aa5.46□□□□□ -1.54
UBE2D3-204ENST00000349311 UNC79Q9P2D8 2635 aa5.46□□□□□ -1.54
UBE2D3-204ENST00000349311 TRAV7A0A075B6U4 112 aa5.45□□□□□ -1.54
UBE2D3-204ENST00000349311 TRBV12-3P01733 135 aa5.45□□□□□ -1.54
UBE2D3-204ENST00000349311 MSMBP08118 114 aa5.45□□□□□ -1.54
UBE2D3-204ENST00000349311 FAM19A3Q7Z5A8 133 aa5.45□□□□□ -1.54
UBE2D3-204ENST00000349311 FAM104AQ969W3 186 aa5.45□□□□□ -1.54
UBE2D3-204ENST00000349311 FAM218AQ96MZ4 157 aa5.45□□□□□ -1.54
UBE2D3-204ENST00000349311 C14orf132Q9NPU4 83 aa5.45□□□□□ -1.54
UBE2D3-204ENST00000349311 LINC00846Q9NV44 126 aa5.45□□□□□ -1.54
UBE2D3-204ENST00000349311 CSMD1Q96PZ7 3565 aa5.45□□□□□ -1.54
UBE2D3-204ENST00000349311 PDZD2O15018 2839 aa5.45□□□□□ -1.54
UBE2D3-204ENST00000349311 AKAP9Q99996 3911 aa5.44□□□□□ -1.54
UBE2D3-204ENST00000349311 F6UB75 175 aa5.44□□□□□ -1.54
UBE2D3-204ENST00000349311 H3BUA1 57 aa5.44□□□□□ -1.54
UBE2D3-204ENST00000349311 CCKP06307 115 aa5.44□□□□□ -1.54
UBE2D3-204ENST00000349311 XCL1P47992 114 aa5.44□□□□□ -1.54
UBE2D3-204ENST00000349311 TMEM86BQ8N661 226 aa5.44□□□□□ -1.54
UBE2D3-204ENST00000349311 USMG5Q96IX5 58 aa5.44□□□□□ -1.54
UBE2D3-204ENST00000349311 XCL2Q9UBD3 114 aa5.44□□□□□ -1.54
UBE2D3-204ENST00000349311 FLNAP21333 2647 aaKnown RBP5.44□□□□□ -1.54
UBE2D3-204ENST00000349311 A0A087WVE0 104 aa5.43□□□□□ -1.54
UBE2D3-204ENST00000349311 JMJD7-PLA2G4BH0Y9G9 81 aa5.43□□□□□ -1.54
UBE2D3-204ENST00000349311 NDUFC1O43677 76 aa5.43□□□□□ -1.54
UBE2D3-204ENST00000349311 SAA4P35542 130 aa5.43□□□□□ -1.54
UBE2D3-204ENST00000349311 SOSTDC1Q6X4U4 206 aa5.43□□□□□ -1.54
UBE2D3-204ENST00000349311 CHCHD7Q9BUK0 85 aa5.43□□□□□ -1.54
UBE2D3-204ENST00000349311 Q9HAA7 133 aa5.43□□□□□ -1.54
UBE2D3-204ENST00000349311 CDKN2A-AS1Q9UH64 79 aa5.43□□□□□ -1.54
UBE2D3-204ENST00000349311 V9GYY9 64 aa5.43□□□□□ -1.54
UBE2D3-204ENST00000349311 CCDC168Q8NDH2 2452 aa5.43□□□□□ -1.54
UBE2D3-204ENST00000349311 TLN2Q9Y4G6 2542 aa5.42□□□□□ -1.54
UBE2D3-204ENST00000349311 MXRA5Q9NR99 2828 aa5.42□□□□□ -1.54
UBE2D3-204ENST00000349311 CELSR1Q9NYQ6 3014 aa5.42□□□□□ -1.54
UBE2D3-204ENST00000349311 G3V318 75 aa5.42□□□□□ -1.54
UBE2D3-204ENST00000349311 K7EMT4 169 aa5.42□□□□□ -1.54
UBE2D3-204ENST00000349311 RS1O15537 224 aa5.42□□□□□ -1.54
UBE2D3-204ENST00000349311 LYPD5Q6UWN5 251 aa5.42□□□□□ -1.54
UBE2D3-204ENST00000349311 LINC00336Q6ZUF6 198 aa5.42□□□□□ -1.54
UBE2D3-204ENST00000349311 Q75L30 129 aa5.42□□□□□ -1.54
UBE2D3-204ENST00000349311 C20orf197Q8N268 126 aa5.42□□□□□ -1.54
UBE2D3-204ENST00000349311 ZNF625Q96I27 306 aaPredicted RBP5.42□□□□□ -1.54
UBE2D3-204ENST00000349311 ORMDL1Q9P0S3 153 aa5.42□□□□□ -1.54
UBE2D3-204ENST00000349311 DEFB1P60022 68 aa5.41□□□□□ -1.54
UBE2D3-204ENST00000349311 RNASE13Q5GAN3 156 aaKnown RBP5.41□□□□□ -1.54
UBE2D3-204ENST00000349311 C1orf195Q5TG92 126 aa5.41□□□□□ -1.54
UBE2D3-204ENST00000349311 RHPN1-AS1Q9BWJ2 59 aa5.41□□□□□ -1.54
UBE2D3-204ENST00000349311 MOB4Q9Y3A3 225 aa5.41□□□□□ -1.54
UBE2D3-204ENST00000349311 NOTCH2Q04721 2471 aa5.4□□□□□ -1.54
UBE2D3-204ENST00000349311 SMIM1B2RUZ4 78 aa5.4□□□□□ -1.54
UBE2D3-204ENST00000349311 RPL35AP18077 110 aaKnown RBP5.4□□□□□ -1.54
UBE2D3-204ENST00000349311 SEC61GP60059 68 aa5.4□□□□□ -1.54
UBE2D3-204ENST00000349311 KLKP1Q107X0 134 aa5.4□□□□□ -1.54
UBE2D3-204ENST00000349311 KRTAP24-1Q3LI83 254 aa5.4□□□□□ -1.54
UBE2D3-204ENST00000349311 UNQ9165/PRO28630Q6UXU0 137 aa5.4□□□□□ -1.54
UBE2D3-204ENST00000349311 C5orf56Q8N8D9 126 aa5.4□□□□□ -1.54
UBE2D3-204ENST00000349311 LINC00467Q9BRT7 94 aa5.4□□□□□ -1.54
UBE2D3-204ENST00000349311 UBL5Q9BZL1 73 aa5.4□□□□□ -1.54
UBE2D3-204ENST00000349311 MYO9AB2RTY4 2548 aa5.4□□□□□ -1.55
UBE2D3-204ENST00000349311 CSMD2Q7Z408 3487 aa5.39□□□□□ -1.55
UBE2D3-204ENST00000349311 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.39□□□□□ -1.55
UBE2D3-204ENST00000349311 TRAV23DV6A0A075B6W5 121 aa5.39□□□□□ -1.55
UBE2D3-204ENST00000349311 A0A087WYN8 130 aa5.39□□□□□ -1.55
UBE2D3-204ENST00000349311 IGKV2-29A2NJV5 120 aaPredicted RBP5.39□□□□□ -1.55
UBE2D3-204ENST00000349311 H7BZZ5 65 aa5.39□□□□□ -1.55
UBE2D3-204ENST00000349311 IGHV4-31P0DP07 118 aa5.39□□□□□ -1.55
UBE2D3-204ENST00000349311 SNRPD3P62318 126 aaKnown RBP5.39□□□□□ -1.55
UBE2D3-204ENST00000349311 SMIM11BQ8TCY0 68 aa5.39□□□□□ -1.55
UBE2D3-204ENST00000349311 LINC00167Q96N53 147 aa5.39□□□□□ -1.55
UBE2D3-204ENST00000349311 SND1-IT1Q9HBX3 110 aa5.39□□□□□ -1.55
UBE2D3-204ENST00000349311 PKIGQ9Y2B9 76 aa5.39□□□□□ -1.55
UBE2D3-204ENST00000349311 A0A0U1RRA0 63 aa5.38□□□□□ -1.55
UBE2D3-204ENST00000349311 NCR3O14931 201 aa5.38□□□□□ -1.55
UBE2D3-204ENST00000349311 LECT2O14960 151 aa5.38□□□□□ -1.55
UBE2D3-204ENST00000349311 IGHV4-38-2P0DP08 117 aa5.38□□□□□ -1.55
UBE2D3-204ENST00000349311 LINC00242Q5T6M2 205 aa5.38□□□□□ -1.55
UBE2D3-204ENST00000349311 C16orf95Q9H693 158 aa5.38□□□□□ -1.55
UBE2D3-204ENST00000349311 ZNF469Q96JG9 3925 aaPredicted RBP5.37□□□□□ -1.55
UBE2D3-204ENST00000349311 IGKV3-7A0A075B6H7 116 aa5.37□□□□□ -1.55
UBE2D3-204ENST00000349311 IGHV3OR16-12A0A075B7B8 117 aa5.37□□□□□ -1.55
UBE2D3-204ENST00000349311 A6NDX4 124 aa5.37□□□□□ -1.55
UBE2D3-204ENST00000349311 HILS1P60008 231 aa5.37□□□□□ -1.55
UBE2D3-204ENST00000349311 BLCAPP62952 87 aa5.37□□□□□ -1.55
UBE2D3-204ENST00000349311 COX6A2Q02221 97 aa5.37□□□□□ -1.55
UBE2D3-204ENST00000349311 LINC00337Q8N6G1 96 aa5.37□□□□□ -1.55
UBE2D3-204ENST00000349311 LAMTOR3Q9UHA4 124 aa5.37□□□□□ -1.55
UBE2D3-204ENST00000349311 TEP1Q99973 2627 aaKnown RBP5.37□□□□□ -1.55
UBE2D3-204ENST00000349311 ACANP16112 2415 aa5.36□□□□□ -1.55
UBE2D3-204ENST00000349311 TRBV7-6A0A0J9YX20 115 aa5.36□□□□□ -1.55
UBE2D3-204ENST00000349311 IGHV3-53P01767 116 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms