RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 IGIPA6NJ69 53 aa8.03□□□□□ -1.12
SMARCE1-202ENST00000348513 Q5XG85 94 aa8.03□□□□□ -1.12
SMARCE1-202ENST00000348513 PRRC2AP48634 2157 aaKnown RBP8.02□□□□□ -1.12
SMARCE1-202ENST00000348513 LINC01546A6NGU7 62 aa8.02□□□□□ -1.12
SMARCE1-202ENST00000348513 TRAV10A0A0B4J240 114 aa8.02□□□□□ -1.13
SMARCE1-202ENST00000348513 KPRPQ5T749 579 aaPredicted RBP8.02□□□□□ -1.13
SMARCE1-202ENST00000348513 TRBV6-4A0A1B0GX49 114 aa8.02□□□□□ -1.13
SMARCE1-202ENST00000348513 LY6G6CO95867 125 aa8.02□□□□□ -1.13
SMARCE1-202ENST00000348513 C11orf21Q9P2W6 132 aa8.02□□□□□ -1.13
SMARCE1-202ENST00000348513 IGKV2-28A0A075B6P5 120 aa8.01□□□□□ -1.13
SMARCE1-202ENST00000348513 IGKV2D-28P01615 120 aa8.01□□□□□ -1.13
SMARCE1-202ENST00000348513 CNFNQ9BYD5 112 aa8.01□□□□□ -1.13
SMARCE1-202ENST00000348513 RNASE3P12724 160 aaKnown RBP8.01□□□□□ -1.13
SMARCE1-202ENST00000348513 ADAMTSL4-AS1Q5T5F5 129 aa8.01□□□□□ -1.13
SMARCE1-202ENST00000348513 TSHBP01222 138 aa8.01□□□□□ -1.13
SMARCE1-202ENST00000348513 Q6ZQY7 126 aa8.01□□□□□ -1.13
SMARCE1-202ENST00000348513 NAV2Q8IVL1 2488 aa8□□□□□ -1.13
SMARCE1-202ENST00000348513 ABCA2Q9BZC7 2435 aa8□□□□□ -1.13
SMARCE1-202ENST00000348513 IGLV1-40P01703 118 aa8□□□□□ -1.13
SMARCE1-202ENST00000348513 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8□□□□□ -1.13
SMARCE1-202ENST00000348513 A8MUN3 132 aa7.99□□□□□ -1.13
SMARCE1-202ENST00000348513 SYCNQ0VAF6 134 aa7.99□□□□□ -1.13
SMARCE1-202ENST00000348513 IGHV4-30-4P0DP06 118 aa7.97□□□□□ -1.13
SMARCE1-202ENST00000348513 EXPH5Q8NEV8 1989 aa7.97□□□□□ -1.13
SMARCE1-202ENST00000348513 ERC2-IT1O76042 136 aa7.97□□□□□ -1.13
SMARCE1-202ENST00000348513 PTPRSQ13332 1948 aa7.97□□□□□ -1.13
SMARCE1-202ENST00000348513 RPL37AP8A6NKH3 93 aa7.97□□□□□ -1.13
SMARCE1-202ENST00000348513 H0Y9P7 68 aa7.96□□□□□ -1.13
SMARCE1-202ENST00000348513 POLR2KP53803 58 aaKnown RBP7.96□□□□□ -1.14
SMARCE1-202ENST00000348513 A0A1W2PPR1 153 aa7.95□□□□□ -1.14
SMARCE1-202ENST00000348513 KLKP1Q107X0 134 aa7.95□□□□□ -1.14
SMARCE1-202ENST00000348513 C10orf25Q5T742 122 aa7.95□□□□□ -1.14
SMARCE1-202ENST00000348513 MYO18BQ8IUG5 2567 aa7.95□□□□□ -1.14
SMARCE1-202ENST00000348513 KLLNB2CW77 178 aa7.95□□□□□ -1.14
SMARCE1-202ENST00000348513 C9orf116Q5BN46 136 aaPredicted RBP7.95□□□□□ -1.14
SMARCE1-202ENST00000348513 LRP4O75096 1905 aa7.95□□□□□ -1.14
SMARCE1-202ENST00000348513 WDR87Q6ZQQ6 2873 aa7.95□□□□□ -1.14
SMARCE1-202ENST00000348513 NAV3Q8IVL0 2385 aa7.95□□□□□ -1.14
SMARCE1-202ENST00000348513 LINC00959A0A1B0GUT2 108 aa7.94□□□□□ -1.14
SMARCE1-202ENST00000348513 H7BZZ5 65 aa7.94□□□□□ -1.14
SMARCE1-202ENST00000348513 C7orf33Q8WU49 177 aa7.94□□□□□ -1.14
SMARCE1-202ENST00000348513 LELP1Q5T871 98 aa7.93□□□□□ -1.14
SMARCE1-202ENST00000348513 RAI1Q7Z5J4 1906 aaPredicted RBP7.93□□□□□ -1.14
SMARCE1-202ENST00000348513 TM2D3Q9BRN9 247 aa7.93□□□□□ -1.14
SMARCE1-202ENST00000348513 SPINK6Q6UWN8 80 aa7.93□□□□□ -1.14
SMARCE1-202ENST00000348513 TRAV22A0A0B4J277 110 aa7.93□□□□□ -1.14
SMARCE1-202ENST00000348513 SMIM29Q86T20 159 aa7.93□□□□□ -1.14
SMARCE1-202ENST00000348513 C10orf142B7Z368 130 aa7.92□□□□□ -1.14
SMARCE1-202ENST00000348513 ODF3L2Q3SX64 289 aa7.92□□□□□ -1.14
SMARCE1-202ENST00000348513 SPINT4Q6UDR6 99 aa7.91□□□□□ -1.14
SMARCE1-202ENST00000348513 ATG2AQ2TAZ0 1938 aa7.9□□□□□ -1.15
SMARCE1-202ENST00000348513 IGLV9-49A0A0B4J1Y8 123 aa7.9□□□□□ -1.15
SMARCE1-202ENST00000348513 COX17Q14061 63 aa7.9□□□□□ -1.15
SMARCE1-202ENST00000348513 MRGPRG-AS1Q2M3A8 158 aa7.9□□□□□ -1.15
SMARCE1-202ENST00000348513 PIEZO1Q92508 2521 aa7.89□□□□□ -1.15
SMARCE1-202ENST00000348513 LINC00575Q6W349 94 aa7.88□□□□□ -1.15
SMARCE1-202ENST00000348513 PCOTHQ58A44 107 aa7.88□□□□□ -1.15
SMARCE1-202ENST00000348513 ZNF580Q9UK33 172 aa7.87□□□□□ -1.15
SMARCE1-202ENST00000348513 M0R378 163 aa7.87□□□□□ -1.15
SMARCE1-202ENST00000348513 GOLGB1Q14789 3259 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-202ENST00000348513 A0A1B0GU69 56 aa7.87□□□□□ -1.15
SMARCE1-202ENST00000348513 DHRS4-AS1Q9P1J3 65 aa7.87□□□□□ -1.15
SMARCE1-202ENST00000348513 MUC7Q8TAX7 377 aa7.87□□□□□ -1.15
SMARCE1-202ENST00000348513 CYSRT1A8MQ03 144 aa7.86□□□□□ -1.15
SMARCE1-202ENST00000348513 CDC42SE2Q9NRR3 84 aa7.86□□□□□ -1.15
SMARCE1-202ENST00000348513 Q6ZTC4 211 aa7.85□□□□□ -1.15
SMARCE1-202ENST00000348513 C1orf64Q8NEQ6 169 aa7.85□□□□□ -1.15
SMARCE1-202ENST00000348513 AMELXQ99217 191 aa7.85□□□□□ -1.15
SMARCE1-202ENST00000348513 IGLV1-51P01701 117 aa7.85□□□□□ -1.15
SMARCE1-202ENST00000348513 C2CD3Q4AC94 2353 aa7.85□□□□□ -1.15
SMARCE1-202ENST00000348513 SMIM1B2RUZ4 78 aa7.84□□□□□ -1.15
SMARCE1-202ENST00000348513 UNQ6190/PRO20217Q6UXQ8 127 aa7.84□□□□□ -1.15
SMARCE1-202ENST00000348513 LOC101927531A0A1B0GV80 90 aa7.84□□□□□ -1.15
SMARCE1-202ENST00000348513 Q1T7F1 81 aa7.84□□□□□ -1.15
SMARCE1-202ENST00000348513 FAM218AQ96MZ4 157 aa7.84□□□□□ -1.15
SMARCE1-202ENST00000348513 H3BPC8 53 aa7.83□□□□□ -1.16
SMARCE1-202ENST00000348513 LOC110117498A0A087WWA1 95 aa7.83□□□□□ -1.16
SMARCE1-202ENST00000348513 COX6A2Q02221 97 aa7.83□□□□□ -1.16
SMARCE1-202ENST00000348513 CDC42SE1Q9NRR8 79 aa7.83□□□□□ -1.16
SMARCE1-202ENST00000348513 CPAMD8Q8IZJ3 1885 aa7.83□□□□□ -1.16
SMARCE1-202ENST00000348513 IGLV4-60A0A075B6I1 120 aa7.83□□□□□ -1.16
SMARCE1-202ENST00000348513 COX8CQ7Z4L0 72 aa7.83□□□□□ -1.16
SMARCE1-202ENST00000348513 Q8N2B8 174 aa7.83□□□□□ -1.16
SMARCE1-202ENST00000348513 PRR3P79522 188 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-202ENST00000348513 Q6ZQT0 140 aa7.82□□□□□ -1.16
SMARCE1-202ENST00000348513 COL5A1P20908 1838 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-202ENST00000348513 LINC00242Q5T6M2 205 aa7.81□□□□□ -1.16
SMARCE1-202ENST00000348513 Q8IZM0 81 aa7.81□□□□□ -1.16
SMARCE1-202ENST00000348513 C6orf223Q8N319 242 aa7.81□□□□□ -1.16
SMARCE1-202ENST00000348513 LINC01554Q52M75 96 aa7.81□□□□□ -1.16
SMARCE1-202ENST00000348513 NUPR2A6NF83 97 aa7.8□□□□□ -1.16
SMARCE1-202ENST00000348513 Q6ZSN1 163 aa7.8□□□□□ -1.16
SMARCE1-202ENST00000348513 LINC00337Q8N6G1 96 aa7.8□□□□□ -1.16
SMARCE1-202ENST00000348513 SPATA3Q8NHX4 192 aa7.8□□□□□ -1.16
SMARCE1-202ENST00000348513 CHCHD7Q9BUK0 85 aa7.8□□□□□ -1.16
SMARCE1-202ENST00000348513 TLN1Q9Y490 2541 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-202ENST00000348513 C16orf95Q9H693 158 aa7.79□□□□□ -1.16
SMARCE1-202ENST00000348513 CENPFP49454 3210 aa7.79□□□□□ -1.16
SMARCE1-202ENST00000348513 C1orf137Q5JT78 98 aa7.79□□□□□ -1.16
SMARCE1-202ENST00000348513 ADAMTS20P59510 1910 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms