RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 LAMA2P24043 3122 aaKnown RBP10.4□□□□□ -0.74
NUP50-201ENST00000347635 SOSTDC1Q6X4U4 206 aa10.39□□□□□ -0.75
NUP50-201ENST00000347635 PRRC2CQ9Y520 2896 aaKnown RBP10.38□□□□□ -0.75
NUP50-201ENST00000347635 C9orf116Q5BN46 136 aaPredicted RBP10.38□□□□□ -0.75
NUP50-201ENST00000347635 UNC80Q8N2C7 3258 aa10.38□□□□□ -0.75
NUP50-201ENST00000347635 LINC00846Q9NV44 126 aa10.38□□□□□ -0.75
NUP50-201ENST00000347635 A0A0J9YWU9 116 aa10.37□□□□□ -0.75
NUP50-201ENST00000347635 ZFYVE26Q68DK2 2539 aa10.37□□□□□ -0.75
NUP50-201ENST00000347635 CYSRT1A8MQ03 144 aa10.37□□□□□ -0.75
NUP50-201ENST00000347635 EPG5Q9HCE0 2579 aa10.37□□□□□ -0.75
NUP50-201ENST00000347635 FAM218AQ96MZ4 157 aa10.37□□□□□ -0.75
NUP50-201ENST00000347635 A0A1B0GUV1 79 aa10.36□□□□□ -0.75
NUP50-201ENST00000347635 NUPR2A6NF83 97 aa10.36□□□□□ -0.75
NUP50-201ENST00000347635 ZNF73O43830 326 aaPredicted RBP10.36□□□□□ -0.75
NUP50-201ENST00000347635 TLN2Q9Y4G6 2542 aa10.36□□□□□ -0.75
NUP50-201ENST00000347635 UNQ6190/PRO20217Q6UXQ8 127 aa10.36□□□□□ -0.75
NUP50-201ENST00000347635 M0R378 163 aa10.35□□□□□ -0.75
NUP50-201ENST00000347635 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.35□□□□□ -0.75
NUP50-201ENST00000347635 JMJD1CQ15652 2540 aa10.34□□□□□ -0.75
NUP50-201ENST00000347635 SNURFQ9Y675 71 aa10.34□□□□□ -0.75
NUP50-201ENST00000347635 FASNP49327 2511 aaKnown RBP10.34□□□□□ -0.75
NUP50-201ENST00000347635 NHLRC4P0CG21 123 aaPredicted RBP10.34□□□□□ -0.75
NUP50-201ENST00000347635 CDH23Q9H251 3354 aa10.34□□□□□ -0.75
NUP50-201ENST00000347635 IGHV3OR16-9A0A0B4J2B5 98 aa10.34□□□□□ -0.75
NUP50-201ENST00000347635 LINC01561Q8N1V8 128 aa10.34□□□□□ -0.75
NUP50-201ENST00000347635 A0A096LNT2 108 aa10.33□□□□□ -0.76
NUP50-201ENST00000347635 MP68P56378 58 aa10.33□□□□□ -0.76
NUP50-201ENST00000347635 NANOS2P60321 138 aaKnown RBP10.33□□□□□ -0.76
NUP50-201ENST00000347635 NDUFC1O43677 76 aa10.32□□□□□ -0.76
NUP50-201ENST00000347635 C2CD3Q4AC94 2353 aa10.31□□□□□ -0.76
NUP50-201ENST00000347635 SYCNQ0VAF6 134 aa10.3□□□□□ -0.76
NUP50-201ENST00000347635 TRAV7A0A075B6U4 112 aa10.3□□□□□ -0.76
NUP50-201ENST00000347635 TRBV10-3A0A0K0K1G6 114 aa10.3□□□□□ -0.76
NUP50-201ENST00000347635 UBE2AP49459 152 aa10.3□□□□□ -0.76
NUP50-201ENST00000347635 C3orf84H3BNL1 204 aa10.3□□□□□ -0.76
NUP50-201ENST00000347635 PRB2P02812 416 aaPredicted RBP10.3□□□□□ -0.76
NUP50-201ENST00000347635 ATP5EP56381 51 aaPredicted RBP10.3□□□□□ -0.76
NUP50-201ENST00000347635 LINC00575Q6W349 94 aa10.29□□□□□ -0.76
NUP50-201ENST00000347635 NDUFC2-KCTD14E9PQ53 114 aa10.28□□□□□ -0.76
NUP50-201ENST00000347635 SVIPQ8NHG7 77 aa10.28□□□□□ -0.76
NUP50-201ENST00000347635 IGKV2-28A0A075B6P5 120 aa10.28□□□□□ -0.76
NUP50-201ENST00000347635 IGKV2D-28P01615 120 aa10.28□□□□□ -0.76
NUP50-201ENST00000347635 ANKRD17O75179 2603 aaKnown RBP10.27□□□□□ -0.76
NUP50-201ENST00000347635 KRTAP24-1Q3LI83 254 aa10.27□□□□□ -0.76
NUP50-201ENST00000347635 C6orf223Q8N319 242 aa10.27□□□□□ -0.77
NUP50-201ENST00000347635 FAM19A1Q7Z5A9 133 aa10.27□□□□□ -0.77
NUP50-201ENST00000347635 FAM19A5Q7Z5A7 132 aaPredicted RBP10.26□□□□□ -0.77
NUP50-201ENST00000347635 BRK1Q8WUW1 75 aa10.26□□□□□ -0.77
NUP50-201ENST00000347635 FAM19A3Q7Z5A8 133 aa10.26□□□□□ -0.77
NUP50-201ENST00000347635 LOC107984640A0A0U1RRK4 108 aa10.26□□□□□ -0.77
NUP50-201ENST00000347635 RETNQ9HD89 108 aa10.26□□□□□ -0.77
NUP50-201ENST00000347635 DNAH14Q0VDD8 3507 aa10.25□□□□□ -0.77
NUP50-201ENST00000347635 CRYGAP11844 174 aa10.25□□□□□ -0.77
NUP50-201ENST00000347635 A8MTW9 85 aa10.25□□□□□ -0.77
NUP50-201ENST00000347635 EIF4EBP3O60516 100 aaPredicted RBP10.25□□□□□ -0.77
NUP50-201ENST00000347635 DHRS4-AS1Q9P1J3 65 aa10.25□□□□□ -0.77
NUP50-201ENST00000347635 EGFEM1PQ0D2K5 195 aa10.24□□□□□ -0.77
NUP50-201ENST00000347635 MPLKIPQ8TAP9 179 aa10.24□□□□□ -0.77
NUP50-201ENST00000347635 SMCR5Q8TEV8 140 aa10.24□□□□□ -0.77
NUP50-201ENST00000347635 B9D2Q9BPU9 175 aa10.24□□□□□ -0.77
NUP50-201ENST00000347635 MUC4Q99102 2169 aa10.23□□□□□ -0.77
NUP50-201ENST00000347635 Q6ZTC4 211 aa10.23□□□□□ -0.77
NUP50-201ENST00000347635 PPDPFQ9H3Y8 114 aa10.23□□□□□ -0.77
NUP50-201ENST00000347635 FN1P02751 2386 aaKnown RBP10.23□□□□□ -0.77
NUP50-201ENST00000347635 SERP1Q9Y6X1 66 aa10.22□□□□□ -0.77
NUP50-201ENST00000347635 Q6ZVQ6 151 aa10.22□□□□□ -0.77
NUP50-201ENST00000347635 IGKV2-24A0A0C4DH68 120 aa10.21□□□□□ -0.77
NUP50-201ENST00000347635 F8WDY8 70 aa10.21□□□□□ -0.77
NUP50-201ENST00000347635 NDUFS5O43920 106 aa10.21□□□□□ -0.77
NUP50-201ENST00000347635 NDUFB1O75438 58 aa10.21□□□□□ -0.77
NUP50-201ENST00000347635 LINC01547P58512 204 aaPredicted RBP10.21□□□□□ -0.78
NUP50-201ENST00000347635 Q8N3U1 123 aa10.2□□□□□ -0.78
NUP50-201ENST00000347635 HRCT1Q6UXD1 115 aa10.2□□□□□ -0.78
NUP50-201ENST00000347635 HIGD2AQ9BW72 106 aa10.19□□□□□ -0.78
NUP50-201ENST00000347635 LINC00474Q9P2X8 69 aa10.19□□□□□ -0.78
NUP50-201ENST00000347635 RPL37AP8A6NKH3 93 aa10.18□□□□□ -0.78
NUP50-201ENST00000347635 LY6G6CO95867 125 aa10.18□□□□□ -0.78
NUP50-201ENST00000347635 POLQO75417 2590 aa10.18□□□□□ -0.78
NUP50-201ENST00000347635 SMIM26A0A096LP01 95 aa10.17□□□□□ -0.78
NUP50-201ENST00000347635 H3BNG1 76 aa10.16□□□□□ -0.78
NUP50-201ENST00000347635 CXCL6P80162 114 aa10.16□□□□□ -0.78
NUP50-201ENST00000347635 LYPD5Q6UWN5 251 aa10.15□□□□□ -0.78
NUP50-201ENST00000347635 MTORP42345 2549 aa10.15□□□□□ -0.78
NUP50-201ENST00000347635 KRTAP1-3Q8IUG1 177 aa10.15□□□□□ -0.78
NUP50-201ENST00000347635 C7orf33Q8WU49 177 aa10.15□□□□□ -0.78
NUP50-201ENST00000347635 H0Y9J4 135 aa10.14□□□□□ -0.79
NUP50-201ENST00000347635 C4orf48Q5BLP8 95 aa10.14□□□□□ -0.79
NUP50-201ENST00000347635 FAM30AQ9NZY2 134 aa10.14□□□□□ -0.79
NUP50-201ENST00000347635 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.14□□□□□ -0.79
NUP50-201ENST00000347635 RPS28P62857 69 aaKnown RBP10.12□□□□□ -0.79
NUP50-201ENST00000347635 C2orf48Q96LS8 159 aa10.12□□□□□ -0.79
NUP50-201ENST00000347635 WFDC10BQ8IUB3 73 aa10.11□□□□□ -0.79
NUP50-201ENST00000347635 CELA1Q9UNI1 258 aa10.11□□□□□ -0.79
NUP50-201ENST00000347635 X6R8D5 127 aa10.11□□□□□ -0.79
NUP50-201ENST00000347635 M0R2N4 97 aa10.11□□□□□ -0.79
NUP50-201ENST00000347635 Q6ZQT0 140 aa10.11□□□□□ -0.79
NUP50-201ENST00000347635 LINC01600Q96MT4 127 aa10.11□□□□□ -0.79
NUP50-201ENST00000347635 SPATA3Q8NHX4 192 aa10.1□□□□□ -0.79
NUP50-201ENST00000347635 C1orf137Q5JT78 98 aa10.1□□□□□ -0.79
NUP50-201ENST00000347635 XIRP2A4UGR9 3374 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 492.2 ms