RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 PRO0628Q9UI54 55 aa10.92□□□□□ -0.66
LRP8-202ENST00000347547 B4DSR2 109 aa10.92□□□□□ -0.66
LRP8-202ENST00000347547 ZNF702PQ9H963 129 aa10.92□□□□□ -0.66
LRP8-202ENST00000347547 A0A096LNT2 108 aa10.91□□□□□ -0.66
LRP8-202ENST00000347547 TMEM86BQ8N661 226 aa10.91□□□□□ -0.66
LRP8-202ENST00000347547 PTPN13Q12923 2485 aa10.91□□□□□ -0.66
LRP8-202ENST00000347547 POLQO75417 2590 aa10.9□□□□□ -0.66
LRP8-202ENST00000347547 C11orf44Q8N8P7 122 aa10.9□□□□□ -0.66
LRP8-202ENST00000347547 IGLV4-60A0A075B6I1 120 aa10.9□□□□□ -0.66
LRP8-202ENST00000347547 DEFB114Q30KQ6 69 aa10.9□□□□□ -0.66
LRP8-202ENST00000347547 APCP25054 2843 aa10.9□□□□□ -0.67
LRP8-202ENST00000347547 LINC00482Q8N8I6 264 aa10.89□□□□□ -0.67
LRP8-202ENST00000347547 DYNLRB2Q8TF09 96 aa10.89□□□□□ -0.67
LRP8-202ENST00000347547 LOC110117498A0A087WWA1 95 aa10.89□□□□□ -0.67
LRP8-202ENST00000347547 KRTAP10-9P60411 292 aa10.89□□□□□ -0.67
LRP8-202ENST00000347547 DEFB136Q30KP8 78 aa10.89□□□□□ -0.67
LRP8-202ENST00000347547 C18orf65Q6ZTR6 163 aa10.88□□□□□ -0.67
LRP8-202ENST00000347547 CR1P17927 2039 aa10.88□□□□□ -0.67
LRP8-202ENST00000347547 Q6ZQT0 140 aa10.88□□□□□ -0.67
LRP8-202ENST00000347547 ZANQ9Y493 2812 aa10.87□□□□□ -0.67
LRP8-202ENST00000347547 IGKV3OR2-268A0A0C4DH90 116 aa10.87□□□□□ -0.67
LRP8-202ENST00000347547 ODF3L2Q3SX64 289 aa10.87□□□□□ -0.67
LRP8-202ENST00000347547 C6orf226Q5I0X4 101 aa10.87□□□□□ -0.67
LRP8-202ENST00000347547 ABCA12Q86UK0 2595 aa10.87□□□□□ -0.67
LRP8-202ENST00000347547 TRBV6-8A0A0A6YYG3 113 aa10.87□□□□□ -0.67
LRP8-202ENST00000347547 STHQ8IWL8 128 aa10.87□□□□□ -0.67
LRP8-202ENST00000347547 Q8IZM0 81 aa10.87□□□□□ -0.67
LRP8-202ENST00000347547 SMIM26A0A096LP01 95 aa10.86□□□□□ -0.67
LRP8-202ENST00000347547 DSCR9P59020 149 aa10.86□□□□□ -0.67
LRP8-202ENST00000347547 LINC00336Q6ZUF6 198 aa10.85□□□□□ -0.67
LRP8-202ENST00000347547 LOC100131303A0A0U1RQF7 123 aa10.85□□□□□ -0.67
LRP8-202ENST00000347547 LINC00959A0A1B0GUT2 108 aa10.85□□□□□ -0.67
LRP8-202ENST00000347547 C4orf3Q8WVX3 66 aa10.85□□□□□ -0.67
LRP8-202ENST00000347547 C16orf95Q9H693 158 aa10.84□□□□□ -0.67
LRP8-202ENST00000347547 NOP10Q9NPE3 64 aaKnown RBP10.84□□□□□ -0.67
LRP8-202ENST00000347547 NBPF19A0A087WUL8 3843 aa10.84□□□□□ -0.67
LRP8-202ENST00000347547 CREBBPQ92793 2442 aa10.84□□□□□ -0.67
LRP8-202ENST00000347547 ZNF561-AS1K7EIQ3 104 aa10.84□□□□□ -0.67
LRP8-202ENST00000347547 LINC01547P58512 204 aaPredicted RBP10.84□□□□□ -0.67
LRP8-202ENST00000347547 C6orf223Q8N319 242 aa10.84□□□□□ -0.67
LRP8-202ENST00000347547 RBM3P98179 157 aaKnown RBP10.83□□□□□ -0.68
LRP8-202ENST00000347547 MAPK1IP1LQ8NDC0 245 aa10.83□□□□□ -0.68
LRP8-202ENST00000347547 NDUFC1O43677 76 aa10.82□□□□□ -0.68
LRP8-202ENST00000347547 CXCL6P80162 114 aa10.82□□□□□ -0.68
LRP8-202ENST00000347547 LINC00575Q6W349 94 aa10.82□□□□□ -0.68
LRP8-202ENST00000347547 PLAC8L1A1L4L8 177 aa10.82□□□□□ -0.68
LRP8-202ENST00000347547 PLA2G2AP14555 144 aa10.82□□□□□ -0.68
LRP8-202ENST00000347547 COX17Q14061 63 aa10.82□□□□□ -0.68
LRP8-202ENST00000347547 J3QLI3 93 aa10.81□□□□□ -0.68
LRP8-202ENST00000347547 ATP5EP56381 51 aaPredicted RBP10.81□□□□□ -0.68
LRP8-202ENST00000347547 FP248Q71RG6 208 aaPredicted RBP10.81□□□□□ -0.68
LRP8-202ENST00000347547 LINC01356Q8N9X3 169 aa10.81□□□□□ -0.68
LRP8-202ENST00000347547 C16orf74Q96GX8 76 aa10.81□□□□□ -0.68
LRP8-202ENST00000347547 Q6YL49 198 aa10.81□□□□□ -0.68
LRP8-202ENST00000347547 HELZ2Q9BYK8 2649 aaKnown RBP10.81□□□□□ -0.68
LRP8-202ENST00000347547 TRGV2A0A075B6R0 118 aa10.8□□□□□ -0.68
LRP8-202ENST00000347547 PDE6GP18545 87 aa10.8□□□□□ -0.68
LRP8-202ENST00000347547 Q6ZVQ6 151 aa10.8□□□□□ -0.68
LRP8-202ENST00000347547 KRTAP1-3Q8IUG1 177 aa10.8□□□□□ -0.68
LRP8-202ENST00000347547 C11orf68Q9H3H3 251 aaKnown RBP10.8□□□□□ -0.68
LRP8-202ENST00000347547 TRAV10A0A0B4J240 114 aa10.8□□□□□ -0.68
LRP8-202ENST00000347547 PRR3P79522 188 aaKnown RBP10.8□□□□□ -0.68
LRP8-202ENST00000347547 NAV2Q8IVL1 2488 aa10.79□□□□□ -0.68
LRP8-202ENST00000347547 C9orf66Q5T8R8 295 aa10.79□□□□□ -0.68
LRP8-202ENST00000347547 MXRA5Q9NR99 2828 aa10.79□□□□□ -0.68
LRP8-202ENST00000347547 C6orf99Q4VX62 202 aa10.79□□□□□ -0.68
LRP8-202ENST00000347547 PDZD2O15018 2839 aa10.78□□□□□ -0.68
LRP8-202ENST00000347547 TRGV4A0A0C4DH28 118 aa10.78□□□□□ -0.68
LRP8-202ENST00000347547 F8WEM9 126 aa10.78□□□□□ -0.68
LRP8-202ENST00000347547 H3BQ85 93 aa10.78□□□□□ -0.68
LRP8-202ENST00000347547 DEFB113Q30KQ7 82 aa10.78□□□□□ -0.68
LRP8-202ENST00000347547 RMI2Q96E14 147 aa10.78□□□□□ -0.68
LRP8-202ENST00000347547 SNURFQ9Y675 71 aa10.77□□□□□ -0.69
LRP8-202ENST00000347547 FSHBP01225 129 aa10.76□□□□□ -0.69
LRP8-202ENST00000347547 HAMPP81172 84 aa10.76□□□□□ -0.69
LRP8-202ENST00000347547 IGHV4-28A0A0C4DH34 117 aa10.75□□□□□ -0.69
LRP8-202ENST00000347547 A0A1B0GUV1 79 aa10.75□□□□□ -0.69
LRP8-202ENST00000347547 J3QKU1 62 aa10.75□□□□□ -0.69
LRP8-202ENST00000347547 RNASE1P07998 156 aaKnown RBP10.75□□□□□ -0.69
LRP8-202ENST00000347547 GIG44P09565 113 aaPredicted RBP10.75□□□□□ -0.69
LRP8-202ENST00000347547 ZNF469Q96JG9 3925 aaPredicted RBP10.75□□□□□ -0.69
LRP8-202ENST00000347547 TRBV7-4A0A0J9YYF1 115 aa10.75□□□□□ -0.69
LRP8-202ENST00000347547 M0R2N4 97 aa10.75□□□□□ -0.69
LRP8-202ENST00000347547 KIAA0087Q14695 138 aa10.75□□□□□ -0.69
LRP8-202ENST00000347547 TEX15Q9BXT5 2789 aa10.74□□□□□ -0.69
LRP8-202ENST00000347547 LAMTOR3Q9UHA4 124 aa10.74□□□□□ -0.69
LRP8-202ENST00000347547 TRBV7-6A0A0J9YX20 115 aa10.74□□□□□ -0.69
LRP8-202ENST00000347547 ITPR3Q14573 2671 aa10.73□□□□□ -0.69
LRP8-202ENST00000347547 IGHV4-31P0DP07 118 aa10.73□□□□□ -0.69
LRP8-202ENST00000347547 KHDC1LQ5JSQ8 128 aa10.73□□□□□ -0.69
LRP8-202ENST00000347547 ERC2-IT1O76042 136 aa10.72□□□□□ -0.69
LRP8-202ENST00000347547 Q8N3U1 123 aa10.72□□□□□ -0.69
LRP8-202ENST00000347547 AKAP9Q99996 3911 aa10.72□□□□□ -0.69
LRP8-202ENST00000347547 MUC7Q8TAX7 377 aa10.71□□□□□ -0.69
LRP8-202ENST00000347547 C1orf43Q9BWL3 253 aa10.71□□□□□ -0.69
LRP8-202ENST00000347547 GCN1Q92616 2671 aaKnown RBP10.71□□□□□ -0.7
LRP8-202ENST00000347547 ITPR2Q14571 2701 aa10.71□□□□□ -0.7
LRP8-202ENST00000347547 MIFP14174 115 aa10.7□□□□□ -0.7
LRP8-202ENST00000347547 Q8NDZ9 215 aa10.7□□□□□ -0.7
LRP8-202ENST00000347547 CMC4P56277 68 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms