RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 SDIM1Q6ZPB5 146 aa16.82■□□□□ 0.28
PTPA-202ENST00000347048 Q8IZM0 81 aa16.82■□□□□ 0.28
PTPA-202ENST00000347048 PRO0255Q9UI72 69 aa16.82■□□□□ 0.28
PTPA-202ENST00000347048 NOTCH3Q9UM47 2321 aa16.82■□□□□ 0.28
PTPA-202ENST00000347048 LINC00482Q8N8I6 264 aa16.82■□□□□ 0.28
PTPA-202ENST00000347048 PFN2P35080 140 aa16.81■□□□□ 0.28
PTPA-202ENST00000347048 X6R8D5 127 aa16.81■□□□□ 0.28
PTPA-202ENST00000347048 Q9HAA7 133 aa16.8■□□□□ 0.28
PTPA-202ENST00000347048 ANK3Q12955 4377 aaKnown RBP16.79■□□□□ 0.28
PTPA-202ENST00000347048 PAX4O43316 350 aa16.78■□□□□ 0.28
PTPA-202ENST00000347048 LY6G6DO95868 133 aa16.78■□□□□ 0.28
PTPA-202ENST00000347048 XCL1P47992 114 aa16.77■□□□□ 0.28
PTPA-202ENST00000347048 A0A087WYN8 130 aa16.77■□□□□ 0.27
PTPA-202ENST00000347048 LYRM9A8MSI8 78 aa16.77■□□□□ 0.27
PTPA-202ENST00000347048 KRTAP10-3P60369 221 aa16.75■□□□□ 0.27
PTPA-202ENST00000347048 SMCR5Q8TEV8 140 aa16.75■□□□□ 0.27
PTPA-202ENST00000347048 B5MCH6 92 aa16.74■□□□□ 0.27
PTPA-202ENST00000347048 C2CD3Q4AC94 2353 aa16.74■□□□□ 0.27
PTPA-202ENST00000347048 CCDC179H3BU77 68 aa16.73■□□□□ 0.27
PTPA-202ENST00000347048 HIVEP1P15822 2718 aa16.73■□□□□ 0.27
PTPA-202ENST00000347048 OR13C6PQ8NH95 151 aa16.73■□□□□ 0.27
PTPA-202ENST00000347048 CXCL5P42830 114 aa16.71■□□□□ 0.27
PTPA-202ENST00000347048 OBSCN-AS1Q96MR7 158 aa16.71■□□□□ 0.27
PTPA-202ENST00000347048 C11orf68Q9H3H3 251 aaKnown RBP16.71■□□□□ 0.27
PTPA-202ENST00000347048 JMJD1CQ15652 2540 aa16.71■□□□□ 0.27
PTPA-202ENST00000347048 GAGE2AQ6NT46 116 aa16.71■□□□□ 0.27
PTPA-202ENST00000347048 CD164L2Q6UWJ8 174 aa16.7■□□□□ 0.26
PTPA-202ENST00000347048 NF1P21359 2839 aa16.7■□□□□ 0.26
PTPA-202ENST00000347048 COX17Q14061 63 aa16.69■□□□□ 0.26
PTPA-202ENST00000347048 LECT2O14960 151 aa16.69■□□□□ 0.26
PTPA-202ENST00000347048 C9orf66Q5T8R8 295 aa16.69■□□□□ 0.26
PTPA-202ENST00000347048 NDUFC2O95298 119 aa16.68■□□□□ 0.26
PTPA-202ENST00000347048 A0A1B0GX51 115 aa16.67■□□□□ 0.26
PTPA-202ENST00000347048 CFAP161Q6P656 301 aa16.66■□□□□ 0.26
PTPA-202ENST00000347048 CLPSL2Q6UWE3 100 aa16.66■□□□□ 0.26
PTPA-202ENST00000347048 FAM236AA0A1B0GUQ0 79 aa16.66■□□□□ 0.26
PTPA-202ENST00000347048 FAM236BA0A1B0GV22 79 aa16.66■□□□□ 0.26
PTPA-202ENST00000347048 ATP5G1P05496 136 aa16.66■□□□□ 0.26
PTPA-202ENST00000347048 SS18L2Q9UHA2 77 aa16.66■□□□□ 0.26
PTPA-202ENST00000347048 CUBNO60494 3623 aa16.66■□□□□ 0.26
PTPA-202ENST00000347048 KIAA0087Q14695 138 aa16.65■□□□□ 0.26
PTPA-202ENST00000347048 A0A096LPF7 62 aa16.64■□□□□ 0.25
PTPA-202ENST00000347048 LINC00269Q8N2A0 174 aa16.64■□□□□ 0.25
PTPA-202ENST00000347048 IGHV4-28A0A0C4DH34 117 aa16.64■□□□□ 0.25
PTPA-202ENST00000347048 CHCHD10Q8WYQ3 142 aaPredicted RBP16.64■□□□□ 0.25
PTPA-202ENST00000347048 ORMDL1Q9P0S3 153 aa16.64■□□□□ 0.25
PTPA-202ENST00000347048 KLK5Q9Y337 293 aaPredicted RBP16.64■□□□□ 0.25
PTPA-202ENST00000347048 APOC4P55056 127 aa16.63■□□□□ 0.25
PTPA-202ENST00000347048 LINC00167Q96N53 147 aa16.62■□□□□ 0.25
PTPA-202ENST00000347048 REG3AQ06141 175 aa16.6■□□□□ 0.25
PTPA-202ENST00000347048 C14orf132Q9NPU4 83 aa16.6■□□□□ 0.25
PTPA-202ENST00000347048 INAFM1C9JVW0 142 aa16.59■□□□□ 0.25
PTPA-202ENST00000347048 ANGP03950 147 aaKnown RBP16.59■□□□□ 0.25
PTPA-202ENST00000347048 DAD1P61803 113 aa16.59■□□□□ 0.25
PTPA-202ENST00000347048 C9orf129Q5T035 196 aaKnown RBP16.59■□□□□ 0.25
PTPA-202ENST00000347048 TMEM126AQ9H061 195 aa16.59■□□□□ 0.25
PTPA-202ENST00000347048 F8P00451 2351 aa16.59■□□□□ 0.25
PTPA-202ENST00000347048 MUC7Q8TAX7 377 aa16.58■□□□□ 0.25
PTPA-202ENST00000347048 NANOS2P60321 138 aaKnown RBP16.58■□□□□ 0.24
PTPA-202ENST00000347048 DEFB135Q30KP9 77 aa16.58■□□□□ 0.24
PTPA-202ENST00000347048 SETD2Q9BYW2 2564 aaPredicted RBP16.56■□□□□ 0.24
PTPA-202ENST00000347048 HIVEP2P31629 2446 aa16.56■□□□□ 0.24
PTPA-202ENST00000347048 MIFP14174 115 aa16.55■□□□□ 0.24
PTPA-202ENST00000347048 NCR3O14931 201 aa16.54■□□□□ 0.24
PTPA-202ENST00000347048 SLPIP03973 132 aa16.54■□□□□ 0.24
PTPA-202ENST00000347048 Q6JHZ5 121 aa16.54■□□□□ 0.24
PTPA-202ENST00000347048 MAST4O15021 2626 aa16.54■□□□□ 0.24
PTPA-202ENST00000347048 Q8N814 137 aa16.53■□□□□ 0.24
PTPA-202ENST00000347048 NIPBLQ6KC79 2804 aaeCLIP16.53■□□□□ 0.24
PTPA-202ENST00000347048 JMJD7-PLA2G4BH0Y9G9 81 aa16.53■□□□□ 0.24
PTPA-202ENST00000347048 MTORP42345 2549 aa16.52■□□□□ 0.24
PTPA-202ENST00000347048 IGLV10-54A0A075B6I4 117 aa16.52■□□□□ 0.24
PTPA-202ENST00000347048 DEFB4AO15263 64 aa16.52■□□□□ 0.24
PTPA-202ENST00000347048 TMEM256-PLSCR3K7ERE1 68 aa16.51■□□□□ 0.23
PTPA-202ENST00000347048 LELP1Q5T871 98 aa16.51■□□□□ 0.23
PTPA-202ENST00000347048 Q8NAQ8 132 aa16.51■□□□□ 0.23
PTPA-202ENST00000347048 FN1P02751 2386 aaKnown RBP16.5■□□□□ 0.23
PTPA-202ENST00000347048 PRR3P79522 188 aaKnown RBP16.5■□□□□ 0.23
PTPA-202ENST00000347048 SPATA3Q8NHX4 192 aa16.5■□□□□ 0.23
PTPA-202ENST00000347048 HIST1H4AP62805 103 aaKnown RBP16.49■□□□□ 0.23
PTPA-202ENST00000347048 Q8N3U1 123 aa16.49■□□□□ 0.23
PTPA-202ENST00000347048 LINC00846Q9NV44 126 aa16.49■□□□□ 0.23
PTPA-202ENST00000347048 CCKP06307 115 aa16.48■□□□□ 0.23
PTPA-202ENST00000347048 SPART-AS1P0CW21 52 aa16.48■□□□□ 0.23
PTPA-202ENST00000347048 C3orf22Q8N5N4 141 aa16.47■□□□□ 0.23
PTPA-202ENST00000347048 NSD1Q96L73 2696 aaPredicted RBP16.47■□□□□ 0.23
PTPA-202ENST00000347048 UQCRQO14949 82 aa16.47■□□□□ 0.23
PTPA-202ENST00000347048 CELA1Q9UNI1 258 aa16.47■□□□□ 0.23
PTPA-202ENST00000347048 SPAG11BQ08648 103 aa16.46■□□□□ 0.22
PTPA-202ENST00000347048 C9orf116Q5BN46 136 aaPredicted RBP16.46■□□□□ 0.22
PTPA-202ENST00000347048 A0A0J9YWU9 116 aa16.45■□□□□ 0.22
PTPA-202ENST00000347048 IGHV4-30-4P0DP06 118 aa16.45■□□□□ 0.22
PTPA-202ENST00000347048 ATOX1O00244 68 aa16.44■□□□□ 0.22
PTPA-202ENST00000347048 S100A7L2Q5SY68 101 aa16.44■□□□□ 0.22
PTPA-202ENST00000347048 PRR34Q9NV39 138 aa16.44■□□□□ 0.22
PTPA-202ENST00000347048 TEP1Q99973 2627 aaKnown RBP16.44■□□□□ 0.22
PTPA-202ENST00000347048 C6orf99Q4VX62 202 aa16.42■□□□□ 0.22
PTPA-202ENST00000347048 LINC00526Q96FQ7 95 aa16.42■□□□□ 0.22
PTPA-202ENST00000347048 C9orf153Q5TBE3 101 aa16.4■□□□□ 0.22
PTPA-202ENST00000347048 GVQW2A0A096LPI5 108 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms