RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 PSPHP1O15172 72 aa12.47□□□□□ -0.41
SPAST-202ENST00000345662 EGFEM1PQ0D2K5 195 aa12.47□□□□□ -0.41
SPAST-202ENST00000345662 IGLV5-39A0A0G2JS06 123 aa12.46□□□□□ -0.41
SPAST-202ENST00000345662 LINC00575Q6W349 94 aa12.46□□□□□ -0.41
SPAST-202ENST00000345662 K7ERS5 55 aa12.46□□□□□ -0.42
SPAST-202ENST00000345662 NANOS2P60321 138 aaKnown RBP12.46□□□□□ -0.42
SPAST-202ENST00000345662 CXCL6P80162 114 aa12.45□□□□□ -0.42
SPAST-202ENST00000345662 ESRGQ1W209 222 aa12.45□□□□□ -0.42
SPAST-202ENST00000345662 KPRPQ5T749 579 aaPredicted RBP12.45□□□□□ -0.42
SPAST-202ENST00000345662 LINC00315P59091 139 aa12.44□□□□□ -0.42
SPAST-202ENST00000345662 Q8N2B8 174 aa12.44□□□□□ -0.42
SPAST-202ENST00000345662 HIVEP3Q5T1R4 2406 aa12.43□□□□□ -0.42
SPAST-202ENST00000345662 CCDC168Q8NDH2 2452 aa12.43□□□□□ -0.42
SPAST-202ENST00000345662 C4orf26Q17RF5 130 aa12.42□□□□□ -0.42
SPAST-202ENST00000345662 FHL2Q14192 279 aa12.41□□□□□ -0.42
SPAST-202ENST00000345662 ADAMTS20P59510 1910 aa12.41□□□□□ -0.42
SPAST-202ENST00000345662 LINC01006Q8NI28 216 aa12.41□□□□□ -0.42
SPAST-202ENST00000345662 BCE1O60756 84 aa12.4□□□□□ -0.42
SPAST-202ENST00000345662 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.4□□□□□ -0.42
SPAST-202ENST00000345662 AVPP01185 164 aa12.4□□□□□ -0.42
SPAST-202ENST00000345662 TLN1Q9Y490 2541 aaKnown RBP12.4□□□□□ -0.42
SPAST-202ENST00000345662 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.39□□□□□ -0.43
SPAST-202ENST00000345662 EXPH5Q8NEV8 1989 aa12.39□□□□□ -0.43
SPAST-202ENST00000345662 A0A1B0GUV1 79 aa12.38□□□□□ -0.43
SPAST-202ENST00000345662 LINC01561Q8N1V8 128 aa12.38□□□□□ -0.43
SPAST-202ENST00000345662 CDSNQ15517 529 aa12.38□□□□□ -0.43
SPAST-202ENST00000345662 PRO3102Q9H379 93 aa12.37□□□□□ -0.43
SPAST-202ENST00000345662 SPINK6Q6UWN8 80 aa12.37□□□□□ -0.43
SPAST-202ENST00000345662 RETNQ9HD89 108 aa12.37□□□□□ -0.43
SPAST-202ENST00000345662 A8MTW9 85 aa12.36□□□□□ -0.43
SPAST-202ENST00000345662 FAM218AQ96MZ4 157 aa12.36□□□□□ -0.43
SPAST-202ENST00000345662 IGF2RP11717 2491 aa12.34□□□□□ -0.43
SPAST-202ENST00000345662 FAM19A4Q96LR4 140 aa12.34□□□□□ -0.43
SPAST-202ENST00000345662 ZNF706Q9Y5V0 76 aaPredicted RBP12.34□□□□□ -0.43
SPAST-202ENST00000345662 IGLV5-45A0A087WSX0 123 aa12.34□□□□□ -0.43
SPAST-202ENST00000345662 C10orf25Q5T742 122 aa12.33□□□□□ -0.44
SPAST-202ENST00000345662 C6orf223Q8N319 242 aa12.33□□□□□ -0.44
SPAST-202ENST00000345662 ABCA2Q9BZC7 2435 aa12.33□□□□□ -0.44
SPAST-202ENST00000345662 TRAV10A0A0B4J240 114 aa12.33□□□□□ -0.44
SPAST-202ENST00000345662 RAI1Q7Z5J4 1906 aaPredicted RBP12.32□□□□□ -0.44
SPAST-202ENST00000345662 IGHV4-30-4P0DP06 118 aa12.31□□□□□ -0.44
SPAST-202ENST00000345662 H0Y9P7 68 aa12.3□□□□□ -0.44
SPAST-202ENST00000345662 IGHV3OR16-9A0A0B4J2B5 98 aa12.3□□□□□ -0.44
SPAST-202ENST00000345662 hDV103S1A0JD37 113 aa12.3□□□□□ -0.44
SPAST-202ENST00000345662 HCG22E2RYF7 251 aa12.3□□□□□ -0.44
SPAST-202ENST00000345662 SPATA3Q8NHX4 192 aa12.29□□□□□ -0.44
SPAST-202ENST00000345662 IGLV9-49A0A0B4J1Y8 123 aa12.29□□□□□ -0.44
SPAST-202ENST00000345662 PLAC8L1A1L4L8 177 aa12.29□□□□□ -0.44
SPAST-202ENST00000345662 IGLV1-51P01701 117 aa12.29□□□□□ -0.44
SPAST-202ENST00000345662 REG3GQ6UW15 175 aa12.28□□□□□ -0.44
SPAST-202ENST00000345662 C11orf72Q8NBR9 251 aa12.28□□□□□ -0.44
SPAST-202ENST00000345662 A0A087WSZ3 146 aa12.27□□□□□ -0.45
SPAST-202ENST00000345662 PCOTHQ58A44 107 aa12.26□□□□□ -0.45
SPAST-202ENST00000345662 FHL3Q13643 280 aa12.26□□□□□ -0.45
SPAST-202ENST00000345662 NCOR2Q9Y618 2525 aa12.26□□□□□ -0.45
SPAST-202ENST00000345662 LIMD2Q9BT23 127 aa12.26□□□□□ -0.45
SPAST-202ENST00000345662 SMIM29Q86T20 159 aa12.24□□□□□ -0.45
SPAST-202ENST00000345662 C2orf48Q96LS8 159 aa12.24□□□□□ -0.45
SPAST-202ENST00000345662 EP400Q96L91 3159 aa12.24□□□□□ -0.45
SPAST-202ENST00000345662 F8WDY8 70 aa12.24□□□□□ -0.45
SPAST-202ENST00000345662 PTPRBP23467 1997 aa12.23□□□□□ -0.45
SPAST-202ENST00000345662 A0A1W2PPR1 153 aa12.23□□□□□ -0.45
SPAST-202ENST00000345662 LITAFQ99732 161 aa12.22□□□□□ -0.45
SPAST-202ENST00000345662 NHLRC4P0CG21 123 aaPredicted RBP12.22□□□□□ -0.45
SPAST-202ENST00000345662 DEFB116Q30KQ4 102 aa12.22□□□□□ -0.45
SPAST-202ENST00000345662 SMCR5Q8TEV8 140 aa12.22□□□□□ -0.45
SPAST-202ENST00000345662 Q6ZQT0 140 aa12.21□□□□□ -0.46
SPAST-202ENST00000345662 IL17DQ8TAD2 202 aa12.21□□□□□ -0.46
SPAST-202ENST00000345662 Q9BRP9 147 aa12.2□□□□□ -0.46
SPAST-202ENST00000345662 INAFM1C9JVW0 142 aa12.2□□□□□ -0.46
SPAST-202ENST00000345662 LINC00474Q9P2X8 69 aa12.2□□□□□ -0.46
SPAST-202ENST00000345662 LOC110117498A0A087WWA1 95 aa12.19□□□□□ -0.46
SPAST-202ENST00000345662 IGHV6-1A0A0B4J1U7 121 aa12.18□□□□□ -0.46
SPAST-202ENST00000345662 Q6ZRU5 148 aa12.17□□□□□ -0.46
SPAST-202ENST00000345662 PIEZO1Q92508 2521 aa12.17□□□□□ -0.46
SPAST-202ENST00000345662 C1orf64Q8NEQ6 169 aa12.17□□□□□ -0.46
SPAST-202ENST00000345662 Q9UF83 564 aa12.16□□□□□ -0.46
SPAST-202ENST00000345662 PLA2G2AP14555 144 aa12.15□□□□□ -0.46
SPAST-202ENST00000345662 C7orf33Q8WU49 177 aa12.15□□□□□ -0.46
SPAST-202ENST00000345662 USP9XQ93008 2570 aaPredicted RBP12.15□□□□□ -0.46
SPAST-202ENST00000345662 KIAA0087Q14695 138 aa12.15□□□□□ -0.46
SPAST-202ENST00000345662 TM2D3Q9BRN9 247 aa12.15□□□□□ -0.46
SPAST-202ENST00000345662 FN1P02751 2386 aaKnown RBP12.15□□□□□ -0.46
SPAST-202ENST00000345662 DOPEY1Q5JWR5 2465 aa12.13□□□□□ -0.47
SPAST-202ENST00000345662 LYPD5Q6UWN5 251 aa12.13□□□□□ -0.47
SPAST-202ENST00000345662 A0A1B0GW54 56 aa12.13□□□□□ -0.47
SPAST-202ENST00000345662 TLN2Q9Y4G6 2542 aa12.12□□□□□ -0.47
SPAST-202ENST00000345662 CENPFP49454 3210 aa12.11□□□□□ -0.47
SPAST-202ENST00000345662 ELOF1P60002 83 aaKnown RBP12.09□□□□□ -0.47
SPAST-202ENST00000345662 Q6ZTC4 211 aa12.09□□□□□ -0.47
SPAST-202ENST00000345662 LY6G6DO95868 133 aa12.08□□□□□ -0.48
SPAST-202ENST00000345662 SETD2Q9BYW2 2564 aaPredicted RBP12.07□□□□□ -0.48
SPAST-202ENST00000345662 ABCA12Q86UK0 2595 aa12.06□□□□□ -0.48
SPAST-202ENST00000345662 C6orf48Q9UBA6 75 aa12.05□□□□□ -0.48
SPAST-202ENST00000345662 USP9YO00507 2555 aaPredicted RBP12.05□□□□□ -0.48
SPAST-202ENST00000345662 C16orf95Q9H693 158 aa12.04□□□□□ -0.48
SPAST-202ENST00000345662 OXLD1Q5BKU9 147 aa12.04□□□□□ -0.48
SPAST-202ENST00000345662 C22orf24Q9Y442 160 aa12.04□□□□□ -0.48
SPAST-202ENST00000345662 PRLHP81277 87 aa12.04□□□□□ -0.48
SPAST-202ENST00000345662 H3BPC8 53 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms