RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 GAGE2EQ4V326 116 aa10.11□□□□□ -0.79
TDP2-201ENST00000341060 Q6Q795 121 aa10.11□□□□□ -0.79
TDP2-201ENST00000341060 C15orf53Q8NAA6 179 aa10.11□□□□□ -0.79
TDP2-201ENST00000341060 GAGE2DQ9UEU5 116 aa10.11□□□□□ -0.79
TDP2-201ENST00000341060 CCL18P55774 89 aa10.1□□□□□ -0.79
TDP2-201ENST00000341060 NBEAL2Q6ZNJ1 2754 aa10.1□□□□□ -0.79
TDP2-201ENST00000341060 SS18Q15532 418 aa10.09□□□□□ -0.79
TDP2-201ENST00000341060 ATRQ13535 2644 aa10.08□□□□□ -0.8
TDP2-201ENST00000341060 LYRM9A8MSI8 78 aa10.08□□□□□ -0.8
TDP2-201ENST00000341060 PFN2P35080 140 aa10.08□□□□□ -0.8
TDP2-201ENST00000341060 XCL1P47992 114 aa10.08□□□□□ -0.8
TDP2-201ENST00000341060 C9orf66Q5T8R8 295 aa10.08□□□□□ -0.8
TDP2-201ENST00000341060 BAALC-AS2P0C853 105 aa10.07□□□□□ -0.8
TDP2-201ENST00000341060 C6orf226Q5I0X4 101 aa10.07□□□□□ -0.8
TDP2-201ENST00000341060 Q8IZM0 81 aa10.07□□□□□ -0.8
TDP2-201ENST00000341060 ANAPC13Q9BS18 74 aa10.07□□□□□ -0.8
TDP2-201ENST00000341060 SMIM11BQ8TCY0 68 aa10.07□□□□□ -0.8
TDP2-201ENST00000341060 PAX4O43316 350 aa10.06□□□□□ -0.8
TDP2-201ENST00000341060 ACYP1P07311 99 aa10.06□□□□□ -0.8
TDP2-201ENST00000341060 LINC01561Q8N1V8 128 aa10.06□□□□□ -0.8
TDP2-201ENST00000341060 SPATA3Q8NHX4 192 aa10.06□□□□□ -0.8
TDP2-201ENST00000341060 C22orf24Q9Y442 160 aa10.06□□□□□ -0.8
TDP2-201ENST00000341060 A0A096LPF7 62 aa10.06□□□□□ -0.8
TDP2-201ENST00000341060 TTC32Q5I0X7 151 aa10.06□□□□□ -0.8
TDP2-201ENST00000341060 NDUFV3P56181 108 aaKnown RBP10.04□□□□□ -0.8
TDP2-201ENST00000341060 DEFB135Q30KP9 77 aa10.04□□□□□ -0.8
TDP2-201ENST00000341060 CLPSL2Q6UWE3 100 aa10.04□□□□□ -0.8
TDP2-201ENST00000341060 C11orf68Q9H3H3 251 aaKnown RBP10.04□□□□□ -0.8
TDP2-201ENST00000341060 TRAV26-1A0A087WT03 109 aa10.04□□□□□ -0.8
TDP2-201ENST00000341060 H0YGX0 51 aa10.03□□□□□ -0.8
TDP2-201ENST00000341060 Q9HAA7 133 aa10.03□□□□□ -0.8
TDP2-201ENST00000341060 FBN1P35555 2871 aaKnown RBP10.03□□□□□ -0.8
TDP2-201ENST00000341060 NHLRC4P0CG21 123 aaPredicted RBP10.03□□□□□ -0.8
TDP2-201ENST00000341060 MALP21145 153 aa10.03□□□□□ -0.8
TDP2-201ENST00000341060 A0A087WYN8 130 aa10.02□□□□□ -0.81
TDP2-201ENST00000341060 DNAL4O96015 105 aa10.02□□□□□ -0.81
TDP2-201ENST00000341060 APOC4P55056 127 aa10.02□□□□□ -0.81
TDP2-201ENST00000341060 INAFM2P0DMQ5 153 aa10.01□□□□□ -0.81
TDP2-201ENST00000341060 CD164L2Q6UWJ8 174 aa10.01□□□□□ -0.81
TDP2-201ENST00000341060 LINC00269Q8N2A0 174 aa10.01□□□□□ -0.81
TDP2-201ENST00000341060 TRBV7-7A0A0K0K1E9 115 aa10.01□□□□□ -0.81
TDP2-201ENST00000341060 DEFB4AO15263 64 aa10.01□□□□□ -0.81
TDP2-201ENST00000341060 IGHV4-28A0A0C4DH34 117 aa10□□□□□ -0.81
TDP2-201ENST00000341060 TRRAPQ9Y4A5 3859 aa10□□□□□ -0.81
TDP2-201ENST00000341060 DAD1P61803 113 aa10□□□□□ -0.81
TDP2-201ENST00000341060 KIAA0087Q14695 138 aa9.99□□□□□ -0.81
TDP2-201ENST00000341060 SDIM1Q6ZPB5 146 aa9.99□□□□□ -0.81
TDP2-201ENST00000341060 OR13C6PQ8NH95 151 aa9.99□□□□□ -0.81
TDP2-201ENST00000341060 CXCL5P42830 114 aa9.98□□□□□ -0.81
TDP2-201ENST00000341060 REG3AQ06141 175 aa9.98□□□□□ -0.81
TDP2-201ENST00000341060 COX17Q14061 63 aa9.98□□□□□ -0.81
TDP2-201ENST00000341060 Q8NAQ8 132 aa9.98□□□□□ -0.81
TDP2-201ENST00000341060 CHCHD10Q8WYQ3 142 aaPredicted RBP9.98□□□□□ -0.81
TDP2-201ENST00000341060 ANGP03950 147 aaKnown RBP9.98□□□□□ -0.81
TDP2-201ENST00000341060 SMCR5Q8TEV8 140 aa9.98□□□□□ -0.81
TDP2-201ENST00000341060 ATP5G1P05496 136 aa9.97□□□□□ -0.81
TDP2-201ENST00000341060 MIFP14174 115 aa9.97□□□□□ -0.81
TDP2-201ENST00000341060 Q8N3U1 123 aa9.97□□□□□ -0.81
TDP2-201ENST00000341060 CELA1Q9UNI1 258 aa9.97□□□□□ -0.81
TDP2-201ENST00000341060 LECT2O14960 151 aa9.97□□□□□ -0.81
TDP2-201ENST00000341060 CFAP161Q6P656 301 aa9.97□□□□□ -0.81
TDP2-201ENST00000341060 IGLV10-54A0A075B6I4 117 aa9.96□□□□□ -0.82
TDP2-201ENST00000341060 IMUPQ9GZP8 106 aa9.96□□□□□ -0.82
TDP2-201ENST00000341060 NDUFC2O95298 119 aa9.95□□□□□ -0.82
TDP2-201ENST00000341060 LINC00643Q86TS7 51 aa9.95□□□□□ -0.82
TDP2-201ENST00000341060 OBSCN-AS1Q96MR7 158 aa9.94□□□□□ -0.82
TDP2-201ENST00000341060 STAB1Q9NY15 2570 aa9.93□□□□□ -0.82
TDP2-201ENST00000341060 SPART-AS1P0CW21 52 aa9.93□□□□□ -0.82
TDP2-201ENST00000341060 C9orf129Q5T035 196 aaKnown RBP9.93□□□□□ -0.82
TDP2-201ENST00000341060 GAGE2AQ6NT46 116 aa9.93□□□□□ -0.82
TDP2-201ENST00000341060 NANOS2P60321 138 aaKnown RBP9.92□□□□□ -0.82
TDP2-201ENST00000341060 KRTAP24-1Q3LI83 254 aa9.92□□□□□ -0.82
TDP2-201ENST00000341060 LELP1Q5T871 98 aa9.92□□□□□ -0.82
TDP2-201ENST00000341060 TMEM126AQ9H061 195 aa9.91□□□□□ -0.82
TDP2-201ENST00000341060 COL6A5A8TX70 2615 aa9.91□□□□□ -0.82
TDP2-201ENST00000341060 WIPF1O43516 503 aa9.91□□□□□ -0.82
TDP2-201ENST00000341060 PRR3P79522 188 aaKnown RBP9.91□□□□□ -0.82
TDP2-201ENST00000341060 C9orf116Q5BN46 136 aaPredicted RBP9.91□□□□□ -0.82
TDP2-201ENST00000341060 C14orf132Q9NPU4 83 aa9.91□□□□□ -0.82
TDP2-201ENST00000341060 ORMDL1Q9P0S3 153 aa9.91□□□□□ -0.82
TDP2-201ENST00000341060 A0A1B0GX51 115 aa9.9□□□□□ -0.82
TDP2-201ENST00000341060 IGHV4-30-4P0DP06 118 aa9.89□□□□□ -0.83
TDP2-201ENST00000341060 WFDC9Q8NEX5 89 aa9.89□□□□□ -0.83
TDP2-201ENST00000341060 LINC00167Q96N53 147 aa9.89□□□□□ -0.83
TDP2-201ENST00000341060 KLK5Q9Y337 293 aaPredicted RBP9.89□□□□□ -0.83
TDP2-201ENST00000341060 CCDC179H3BU77 68 aa9.89□□□□□ -0.83
TDP2-201ENST00000341060 HTN3P15516 51 aa9.89□□□□□ -0.83
TDP2-201ENST00000341060 PRR34Q9NV39 138 aa9.89□□□□□ -0.83
TDP2-201ENST00000341060 SLPIP03973 132 aa9.88□□□□□ -0.83
TDP2-201ENST00000341060 MUC7Q8TAX7 377 aa9.88□□□□□ -0.83
TDP2-201ENST00000341060 B5MCH6 92 aa9.88□□□□□ -0.83
TDP2-201ENST00000341060 FAM236AA0A1B0GUQ0 79 aa9.87□□□□□ -0.83
TDP2-201ENST00000341060 FAM236BA0A1B0GV22 79 aa9.87□□□□□ -0.83
TDP2-201ENST00000341060 SPAG11BQ08648 103 aa9.87□□□□□ -0.83
TDP2-201ENST00000341060 Q8N814 137 aa9.87□□□□□ -0.83
TDP2-201ENST00000341060 NCR3O14931 201 aa9.86□□□□□ -0.83
TDP2-201ENST00000341060 Q8NDZ9 215 aa9.86□□□□□ -0.83
TDP2-201ENST00000341060 A0A0J9YWU9 116 aa9.85□□□□□ -0.83
TDP2-201ENST00000341060 C10orf25Q5T742 122 aa9.85□□□□□ -0.83
TDP2-201ENST00000341060 UNQ6190/PRO20217Q6UXQ8 127 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 1414.8 ms