RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 TRAV13-1A0A0B4J241 112 aa3.82□□□□□ -1.8
USP16-201ENST00000334352 PRSS2P07478 247 aa3.82□□□□□ -1.8
USP16-201ENST00000334352 C10orf25Q5T742 122 aa3.82□□□□□ -1.8
USP16-201ENST00000334352 UNQ6190/PRO20217Q6UXQ8 127 aa3.82□□□□□ -1.8
USP16-201ENST00000334352 PHF5AQ7RTV0 110 aaKnown RBP3.82□□□□□ -1.8
USP16-201ENST00000334352 C5orf38Q86SI9 138 aa3.82□□□□□ -1.8
USP16-201ENST00000334352 C1orf137Q5JT78 98 aa3.81□□□□□ -1.8
USP16-201ENST00000334352 VCX2Q9H322 139 aa3.81□□□□□ -1.8
USP16-201ENST00000334352 C5orf52A6NGY3 159 aa3.81□□□□□ -1.8
USP16-201ENST00000334352 RPL18AQ02543 176 aaKnown RBP3.81□□□□□ -1.8
USP16-201ENST00000334352 SEC11CQ9BY50 192 aa3.81□□□□□ -1.8
USP16-201ENST00000334352 LOC107984156A0A0G2JMH3 177 aa3.81□□□□□ -1.8
USP16-201ENST00000334352 RPS29P62273 56 aaKnown RBP3.81□□□□□ -1.8
USP16-201ENST00000334352 ARL17AQ8IVW1 177 aa3.81□□□□□ -1.8
USP16-201ENST00000334352 IGKV3OR2-268A0A0C4DH90 116 aa3.8□□□□□ -1.8
USP16-201ENST00000334352 M0QXV9 152 aa3.8□□□□□ -1.8
USP16-201ENST00000334352 RPL28P46779 137 aaKnown RBP3.8□□□□□ -1.8
USP16-201ENST00000334352 KRTAP11-1Q8IUC1 163 aa3.8□□□□□ -1.8
USP16-201ENST00000334352 SMIM1B2RUZ4 78 aa3.8□□□□□ -1.8
USP16-201ENST00000334352 C22orf24Q9Y442 160 aa3.8□□□□□ -1.8
USP16-201ENST00000334352 MRPL54Q6P161 138 aaKnown RBP3.79□□□□□ -1.8
USP16-201ENST00000334352 CST9LQ9H4G1 147 aa3.79□□□□□ -1.8
USP16-201ENST00000334352 RHEBQ15382 184 aa3.79□□□□□ -1.8
USP16-201ENST00000334352 PMVKQ15126 192 aa3.78□□□□□ -1.8
USP16-201ENST00000334352 MRPL55Q7Z7F7 128 aaKnown RBP3.78□□□□□ -1.8
USP16-201ENST00000334352 COX7B2Q8TF08 81 aa3.78□□□□□ -1.8
USP16-201ENST00000334352 A0A0U1RQV1 116 aa3.78□□□□□ -1.8
USP16-201ENST00000334352 TMEM218A2RU14 115 aa3.78□□□□□ -1.8
USP16-201ENST00000334352 H3BRM9 83 aa3.78□□□□□ -1.8
USP16-201ENST00000334352 RAB14P61106 215 aa3.78□□□□□ -1.8
USP16-201ENST00000334352 SPAG11AQ6PDA7 123 aa3.78□□□□□ -1.8
USP16-201ENST00000334352 FP248Q71RG6 208 aaPredicted RBP3.78□□□□□ -1.8
USP16-201ENST00000334352 TRAV12-1A0A0B4J245 112 aa3.77□□□□□ -1.81
USP16-201ENST00000334352 CKS1BP61024 79 aa3.77□□□□□ -1.81
USP16-201ENST00000334352 TPRXLQ17RH7 258 aa3.77□□□□□ -1.81
USP16-201ENST00000334352 OPRPNQ99935 248 aaPredicted RBP3.77□□□□□ -1.81
USP16-201ENST00000334352 FAM168BA1KXE4 195 aa3.76□□□□□ -1.81
USP16-201ENST00000334352 C6orf226Q5I0X4 101 aa3.76□□□□□ -1.81
USP16-201ENST00000334352 GEMIN7Q9H840 131 aaKnown RBP3.76□□□□□ -1.81
USP16-201ENST00000334352 CDKN2A-AS1Q9UH64 79 aa3.76□□□□□ -1.81
USP16-201ENST00000334352 RAB5BP61020 215 aa3.76□□□□□ -1.81
USP16-201ENST00000334352 PPDPFQ9H3Y8 114 aa3.76□□□□□ -1.81
USP16-201ENST00000334352 SPRR1AP35321 89 aa3.76□□□□□ -1.81
USP16-201ENST00000334352 RNASE13Q5GAN3 156 aaKnown RBP3.76□□□□□ -1.81
USP16-201ENST00000334352 PRR26Q8N8Z3 221 aa3.76□□□□□ -1.81
USP16-201ENST00000334352 SCGB3A1Q96QR1 104 aa3.76□□□□□ -1.81
USP16-201ENST00000334352 LINC00587B1AMM8 73 aa3.75□□□□□ -1.81
USP16-201ENST00000334352 CRYGAP11844 174 aa3.75□□□□□ -1.81
USP16-201ENST00000334352 ADCYAP1P18509 176 aa3.75□□□□□ -1.81
USP16-201ENST00000334352 S100PP25815 95 aa3.75□□□□□ -1.81
USP16-201ENST00000334352 LINC00483Q53H64 154 aa3.75□□□□□ -1.81
USP16-201ENST00000334352 A0A1B0GVG6 124 aa3.75□□□□□ -1.81
USP16-201ENST00000334352 ATP5LO75964 103 aa3.75□□□□□ -1.81
USP16-201ENST00000334352 VPREB1P12018 145 aa3.75□□□□□ -1.81
USP16-201ENST00000334352 RPL24P83731 157 aaKnown RBP3.75□□□□□ -1.81
USP16-201ENST00000334352 FAM19A5Q7Z5A7 132 aaPredicted RBP3.75□□□□□ -1.81
USP16-201ENST00000334352 ZNF625Q96I27 306 aaPredicted RBP3.75□□□□□ -1.81
USP16-201ENST00000334352 LINC00167Q96N53 147 aa3.75□□□□□ -1.81
USP16-201ENST00000334352 YPEL4Q96NS1 127 aa3.75□□□□□ -1.81
USP16-201ENST00000334352 PRYO14603 147 aa3.74□□□□□ -1.81
USP16-201ENST00000334352 LINC00337Q8N6G1 96 aa3.74□□□□□ -1.81
USP16-201ENST00000334352 CHCHD1Q96BP2 118 aaKnown RBP3.74□□□□□ -1.81
USP16-201ENST00000334352 ZNF706Q9Y5V0 76 aaPredicted RBP3.74□□□□□ -1.81
USP16-201ENST00000334352 A0A096LNJ9 63 aa3.73□□□□□ -1.81
USP16-201ENST00000334352 HERV-K104P63124 156 aa3.73□□□□□ -1.81
USP16-201ENST00000334352 UBE2BP63146 152 aa3.73□□□□□ -1.81
USP16-201ENST00000334352 C2orf82Q6UX34 121 aa3.73□□□□□ -1.81
USP16-201ENST00000334352 LCE2AQ5TA79 106 aaPredicted RBP3.73□□□□□ -1.81
USP16-201ENST00000334352 TRBV10-2A0A0K0K1G8 114 aa3.73□□□□□ -1.81
USP16-201ENST00000334352 ZNF22P17026 224 aaPredicted RBP3.73□□□□□ -1.81
USP16-201ENST00000334352 IFITM2Q01629 132 aa3.73□□□□□ -1.81
USP16-201ENST00000334352 BAGE3Q86Y29 109 aa3.73□□□□□ -1.81
USP16-201ENST00000334352 KRTAP4-16G5E9R7 235 aaPredicted RBP3.72□□□□□ -1.81
USP16-201ENST00000334352 GAGE2EQ4V326 116 aa3.72□□□□□ -1.81
USP16-201ENST00000334352 KRTAP13-2Q52LG2 175 aa3.72□□□□□ -1.81
USP16-201ENST00000334352 URB1-AS1Q96HZ7 61 aa3.72□□□□□ -1.81
USP16-201ENST00000334352 KCNQ1DNQ9H478 68 aa3.72□□□□□ -1.81
USP16-201ENST00000334352 GAGE2DQ9UEU5 116 aa3.72□□□□□ -1.81
USP16-201ENST00000334352 FLG2Q5D862 2391 aaPredicted RBP3.72□□□□□ -1.81
USP16-201ENST00000334352 IGKV2D-26A0A0A0MRZ7 120 aa3.72□□□□□ -1.81
USP16-201ENST00000334352 C11orf86A6NJI1 115 aa3.72□□□□□ -1.81
USP16-201ENST00000334352 HBDP02042 147 aa3.72□□□□□ -1.81
USP16-201ENST00000334352 hCG_2014768A0A024R1R8 64 aa3.71□□□□□ -1.81
USP16-201ENST00000334352 LOC389332A0A1B0GUA5 103 aa3.71□□□□□ -1.81
USP16-201ENST00000334352 M0R378 163 aa3.71□□□□□ -1.81
USP16-201ENST00000334352 LINC00469Q8N7U9 141 aa3.71□□□□□ -1.81
USP16-201ENST00000334352 ERG28Q9UKR5 140 aa3.71□□□□□ -1.81
USP16-201ENST00000334352 TMEM223A0PJW6 202 aa3.71□□□□□ -1.82
USP16-201ENST00000334352 LINC00614P0C842 121 aa3.71□□□□□ -1.82
USP16-201ENST00000334352 C18orf32Q8TCD1 76 aa3.71□□□□□ -1.82
USP16-201ENST00000334352 XP32Q5T750 250 aa3.7□□□□□ -1.82
USP16-201ENST00000334352 SND1-IT1Q9HBX3 110 aa3.7□□□□□ -1.82
USP16-201ENST00000334352 CBY1Q9Y3M2 126 aa3.7□□□□□ -1.82
USP16-201ENST00000334352 NDUFC2O95298 119 aa3.7□□□□□ -1.82
USP16-201ENST00000334352 NMUP48645 174 aa3.7□□□□□ -1.82
USP16-201ENST00000334352 TYMSOSQ8TAI1 123 aa3.7□□□□□ -1.82
USP16-201ENST00000334352 NKAPP1Q8N9T2 125 aa3.7□□□□□ -1.82
USP16-201ENST00000334352 RNF213Q63HN8 5207 aa3.69□□□□□ -1.82
USP16-201ENST00000334352 LINC00304Q8N9R0 145 aa3.69□□□□□ -1.82
USP16-201ENST00000334352 SPRR4Q96PI1 79 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms