RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 Q8N1X5 172 aa6.01□□□□□ -1.45
LSAMP-201ENST00000333617 RETNQ9HD89 108 aa6.01□□□□□ -1.45
LSAMP-201ENST00000333617 ICOSQ9Y6W8 199 aa6.01□□□□□ -1.45
LSAMP-201ENST00000333617 IGHV3OR16-9A0A0B4J2B5 98 aa6.01□□□□□ -1.45
LSAMP-201ENST00000333617 LOC107984156A0A0G2JMH3 177 aa6.01□□□□□ -1.45
LSAMP-201ENST00000333617 G3V4G9 280 aa6.01□□□□□ -1.45
LSAMP-201ENST00000333617 SS18Q15532 418 aa6.01□□□□□ -1.45
LSAMP-201ENST00000333617 LYRM7Q5U5X0 104 aa6.01□□□□□ -1.45
LSAMP-201ENST00000333617 ARL17AQ8IVW1 177 aa6.01□□□□□ -1.45
LSAMP-201ENST00000333617 COX7B2Q8TF08 81 aa6.01□□□□□ -1.45
LSAMP-201ENST00000333617 ZNF625Q96I27 306 aaPredicted RBP6.01□□□□□ -1.45
LSAMP-201ENST00000333617 A0A087WZ39 114 aa6□□□□□ -1.45
LSAMP-201ENST00000333617 IGHV3-33P01772 117 aa6□□□□□ -1.45
LSAMP-201ENST00000333617 NPC2P61916 151 aa6□□□□□ -1.45
LSAMP-201ENST00000333617 MEIG1Q5JSS6 88 aa6□□□□□ -1.45
LSAMP-201ENST00000333617 SFTA2Q6UW10 78 aa6□□□□□ -1.45
LSAMP-201ENST00000333617 COPS9Q8WXC6 57 aa6□□□□□ -1.45
LSAMP-201ENST00000333617 ERG28Q9UKR5 140 aa6□□□□□ -1.45
LSAMP-201ENST00000333617 H3BMG7 143 aa5.99□□□□□ -1.45
LSAMP-201ENST00000333617 LELP1Q5T871 98 aa5.99□□□□□ -1.45
LSAMP-201ENST00000333617 C5orf38Q86SI9 138 aa5.99□□□□□ -1.45
LSAMP-201ENST00000333617 DAND5Q8N907 189 aa5.99□□□□□ -1.45
LSAMP-201ENST00000333617 TOMM7Q9P0U1 55 aa5.99□□□□□ -1.45
LSAMP-201ENST00000333617 F8W1H4 67 aa5.98□□□□□ -1.45
LSAMP-201ENST00000333617 H7C2G1 150 aa5.98□□□□□ -1.45
LSAMP-201ENST00000333617 XCL1P47992 114 aa5.98□□□□□ -1.45
LSAMP-201ENST00000333617 PSMB2P49721 201 aa5.98□□□□□ -1.45
LSAMP-201ENST00000333617 CLPSL2Q6UWE3 100 aa5.98□□□□□ -1.45
LSAMP-201ENST00000333617 LINC00308Q8TCZ7 52 aa5.98□□□□□ -1.45
LSAMP-201ENST00000333617 C11orf68Q9H3H3 251 aaKnown RBP5.98□□□□□ -1.45
LSAMP-201ENST00000333617 MGAM2Q2M2H8 2515 aa5.98□□□□□ -1.45
LSAMP-201ENST00000333617 A0A0U1RRA0 63 aa5.97□□□□□ -1.45
LSAMP-201ENST00000333617 ZNF561-AS1K7EIQ3 104 aa5.97□□□□□ -1.45
LSAMP-201ENST00000333617 ANGP03950 147 aaKnown RBP5.97□□□□□ -1.45
LSAMP-201ENST00000333617 SCGB1C2P0DMR2 95 aa5.97□□□□□ -1.45
LSAMP-201ENST00000333617 Q1RN00 199 aa5.97□□□□□ -1.45
LSAMP-201ENST00000333617 OCIAD2Q56VL3 154 aa5.97□□□□□ -1.45
LSAMP-201ENST00000333617 LINC01561Q8N1V8 128 aa5.97□□□□□ -1.45
LSAMP-201ENST00000333617 LINC00269Q8N2A0 174 aa5.97□□□□□ -1.45
LSAMP-201ENST00000333617 TRBV20-1A0A075B6N2 111 aa5.97□□□□□ -1.45
LSAMP-201ENST00000333617 SLPIP03973 132 aa5.97□□□□□ -1.45
LSAMP-201ENST00000333617 REG3AQ06141 175 aa5.97□□□□□ -1.45
LSAMP-201ENST00000333617 RNF151Q2KHN1 245 aa5.97□□□□□ -1.45
LSAMP-201ENST00000333617 HUWE1Q7Z6Z7 4374 aaKnown RBP5.96□□□□□ -1.46
LSAMP-201ENST00000333617 H3BNG1 76 aa5.96□□□□□ -1.46
LSAMP-201ENST00000333617 LYPD5Q6UWN5 251 aa5.96□□□□□ -1.46
LSAMP-201ENST00000333617 PPDPFQ9H3Y8 114 aa5.96□□□□□ -1.46
LSAMP-201ENST00000333617 A0A0J9YWU9 116 aa5.95□□□□□ -1.46
LSAMP-201ENST00000333617 K7ERU9 68 aa5.95□□□□□ -1.46
LSAMP-201ENST00000333617 TCL1BO95988 128 aa5.95□□□□□ -1.46
LSAMP-201ENST00000333617 WFDC2Q14508 124 aa5.95□□□□□ -1.46
LSAMP-201ENST00000333617 C6orf226Q5I0X4 101 aa5.95□□□□□ -1.46
LSAMP-201ENST00000333617 KPRPQ5T749 579 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-201ENST00000333617 CD164L2Q6UWJ8 174 aa5.95□□□□□ -1.46
LSAMP-201ENST00000333617 Q6ZTC4 211 aa5.95□□□□□ -1.46
LSAMP-201ENST00000333617 TRBV30A0A0K0K1B3 111 aa5.94□□□□□ -1.46
LSAMP-201ENST00000333617 COX7A2LO14548 114 aa5.94□□□□□ -1.46
LSAMP-201ENST00000333617 RPL13AP40429 203 aaKnown RBP5.94□□□□□ -1.46
LSAMP-201ENST00000333617 SOSTDC1Q6X4U4 206 aa5.94□□□□□ -1.46
LSAMP-201ENST00000333617 Q8IZM0 81 aa5.94□□□□□ -1.46
LSAMP-201ENST00000333617 MTURNQ8N3F0 131 aa5.94□□□□□ -1.46
LSAMP-201ENST00000333617 CHCHD10Q8WYQ3 142 aaPredicted RBP5.94□□□□□ -1.46
LSAMP-201ENST00000333617 PRO0461Q9UI25 63 aa5.94□□□□□ -1.46
LSAMP-201ENST00000333617 IGLV10-54A0A075B6I4 117 aa5.93□□□□□ -1.46
LSAMP-201ENST00000333617 IBA57-AS1B1ANH7 110 aa5.93□□□□□ -1.46
LSAMP-201ENST00000333617 TRIAP1O43715 76 aa5.93□□□□□ -1.46
LSAMP-201ENST00000333617 LINC00158P58513 81 aa5.93□□□□□ -1.46
LSAMP-201ENST00000333617 C11orf45Q8TAV5 145 aa5.93□□□□□ -1.46
LSAMP-201ENST00000333617 COL7A1Q02388 2944 aa5.93□□□□□ -1.46
LSAMP-201ENST00000333617 MALP21145 153 aa5.93□□□□□ -1.46
LSAMP-201ENST00000333617 NANOS2P60321 138 aaKnown RBP5.93□□□□□ -1.46
LSAMP-201ENST00000333617 MIR7-3HGQ8N6C7 128 aa5.93□□□□□ -1.46
LSAMP-201ENST00000333617 KLK12Q9UKR0 248 aa5.93□□□□□ -1.46
LSAMP-201ENST00000333617 COX6CP09669 75 aa5.92□□□□□ -1.46
LSAMP-201ENST00000333617 CKS1BP61024 79 aa5.92□□□□□ -1.46
LSAMP-201ENST00000333617 CFAP161Q6P656 301 aa5.92□□□□□ -1.46
LSAMP-201ENST00000333617 PRR34Q9NV39 138 aa5.92□□□□□ -1.46
LSAMP-201ENST00000333617 DEFB131BA0A096LNP1 70 aa5.91□□□□□ -1.46
LSAMP-201ENST00000333617 PRB2P02812 416 aaPredicted RBP5.91□□□□□ -1.46
LSAMP-201ENST00000333617 PFN2P35080 140 aa5.91□□□□□ -1.46
LSAMP-201ENST00000333617 CXCL5P42830 114 aa5.91□□□□□ -1.46
LSAMP-201ENST00000333617 FOXI1Q12951 378 aa5.91□□□□□ -1.46
LSAMP-201ENST00000333617 ATXN8Q156A1 80 aa5.91□□□□□ -1.46
LSAMP-201ENST00000333617 ETDBQ3ZM63 59 aa5.91□□□□□ -1.46
LSAMP-201ENST00000333617 GAGE12HA6NDE8 117 aa5.9□□□□□ -1.46
LSAMP-201ENST00000333617 K7EIL1 84 aa5.9□□□□□ -1.46
LSAMP-201ENST00000333617 CRPP02741 224 aa5.9□□□□□ -1.46
LSAMP-201ENST00000333617 KIAA0087Q14695 138 aa5.9□□□□□ -1.46
LSAMP-201ENST00000333617 ENHOQ6UWT2 76 aa5.9□□□□□ -1.46
LSAMP-201ENST00000333617 C2orf82Q6UX34 121 aa5.9□□□□□ -1.46
LSAMP-201ENST00000333617 SND1-IT1Q9HBX3 110 aa5.9□□□□□ -1.46
LSAMP-201ENST00000333617 DNAH9Q9NYC9 4486 aa5.9□□□□□ -1.46
LSAMP-201ENST00000333617 TRAV13-2A0A0B4J235 113 aa5.89□□□□□ -1.47
LSAMP-201ENST00000333617 TRAV8-4A0A0B4J246 113 aa5.89□□□□□ -1.47
LSAMP-201ENST00000333617 PCP4P48539 62 aa5.89□□□□□ -1.47
LSAMP-201ENST00000333617 CCL18P55774 89 aa5.89□□□□□ -1.47
LSAMP-201ENST00000333617 KRTAP21-3Q3LHN1 58 aa5.89□□□□□ -1.47
LSAMP-201ENST00000333617 DEFB121Q5J5C9 76 aa5.89□□□□□ -1.47
LSAMP-201ENST00000333617 WFDC10BQ8IUB3 73 aa5.89□□□□□ -1.47
LSAMP-201ENST00000333617 TM2D3Q9BRN9 247 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms