RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 DEFB131AP59861 70 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 DEFB125Q8N687 156 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 PTH2Q96A98 100 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 CHCHD1Q96BP2 118 aaKnown RBP1.64□□□□□ -2.15
SKP1-201ENST00000328392 AP1S3Q96PC3 154 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 LINC00467Q9BRT7 94 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 NXT2Q9NPJ8 142 aaKnown RBP1.64□□□□□ -2.15
SKP1-201ENST00000328392 VPS13CQ709C8 3753 aa1.64□□□□□ -2.15
SKP1-201ENST00000328392 CSMD1Q96PZ7 3565 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 ZNF469Q96JG9 3925 aaPredicted RBP1.63□□□□□ -2.15
SKP1-201ENST00000328392 IGHV3-73A0A0B4J1V6 119 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 TRAV12-3A0A0B4J271 114 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 GRIFINA4D1Z8 144 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 H3BVH4 76 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 M0R2P5 195 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 M0R2Z0 102 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 CD7P09564 240 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 LINC00614P0C842 121 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 ZNF705DP0CH99 300 aaPredicted RBP1.63□□□□□ -2.15
SKP1-201ENST00000328392 ZNF705BP0CI00 300 aaPredicted RBP1.63□□□□□ -2.15
SKP1-201ENST00000328392 FABP4P15090 132 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 HERVK_113P63121 156 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 S100A12P80511 92 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 SPINK13Q1W4C9 94 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 GDF5OSQ5U4N7 250 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 AMTNQ6UX39 209 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 SCGB1D4Q6XE38 83 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 HIST3H2BBQ8N257 126 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 C3orf56Q8N813 242 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 WFDC9Q8NEX5 89 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 C18orf32Q8TCD1 76 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 PRELID3AQ96N28 172 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 HIST1H2BLQ99880 126 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 C20orf78Q9BR46 151 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 MAP1LC3AQ9H492 121 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 DPH3P1Q9H4G8 78 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 HSPB8Q9UJY1 196 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 STAB1Q9NY15 2570 aa1.63□□□□□ -2.15
SKP1-201ENST00000328392 TRAV12-2A0A075B6T6 113 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 C20orf202A1L168 122 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 SMIM9A6NGZ8 99 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 KNCNA6PVL3 124 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 A8MWV9 139 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 TMEM238C9JI98 176 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 D6R8Y8 96 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 M0R381 172 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 GNRH2O43555 120 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 RNASE3P12724 160 aaKnown RBP1.62□□□□□ -2.15
SKP1-201ENST00000328392 EVI2AP22794 236 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 TSPEAR-AS2P59090 65 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 KRTAP12-1P59990 96 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 DAD1P61803 113 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 JOSD1Q15040 202 aaPredicted RBP1.62□□□□□ -2.15
SKP1-201ENST00000328392 PMCHL1Q16048 86 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 IQCJQ1A5X6 159 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 LGALS9BQ3B8N2 356 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 OR10AG1Q8NH19 301 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 TMEM263Q8WUH6 116 aaKnown RBP1.62□□□□□ -2.15
SKP1-201ENST00000328392 TIMM8BQ9Y5J9 83 aaPredicted RBP1.62□□□□□ -2.15
SKP1-201ENST00000328392 MGAM2Q2M2H8 2515 aa1.62□□□□□ -2.15
SKP1-201ENST00000328392 MUC21A0A0G2JKD1 596 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 TRBV10-1A0A0K0K1A3 114 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 TRBV6-5A0A0K0K1A5 114 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 MUC21A0A140T8X8 626 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 TINCRA0A1B0GVN0 87 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 LINC01546A6NGU7 62 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 TSTD3H0UI37 97 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 LEPROTL1O95214 131 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 HBDP02042 147 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 PRB4P10163 310 aaPredicted RBP1.61□□□□□ -2.15
SKP1-201ENST00000328392 HTN1P15515 57 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 FCER1GP30273 86 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 IFI27P40305 119 aaPredicted RBP1.61□□□□□ -2.15
SKP1-201ENST00000328392 DEFB1P60022 68 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 KRTDAPP60985 99 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 RHOHQ15669 191 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 RRN3P1Q2M238 152 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 LGALS9CQ6DKI2 356 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 ZNF705AQ6ZN79 300 aaPredicted RBP1.61□□□□□ -2.15
SKP1-201ENST00000328392 SPATA12Q7Z6I5 190 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 Q8N8P6 123 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 DNAJC30Q96LL9 226 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 C12orf57Q99622 126 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 UPK3BQ9BT76 320 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 TMEM70Q9BUB7 260 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 SMIM2Q9BVW6 85 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 ST20Q9HBF5 79 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 NIT2Q9NQR4 276 aa1.61□□□□□ -2.15
SKP1-201ENST00000328392 NOTCH1P46531 2555 aa1.6□□□□□ -2.15
SKP1-201ENST00000328392 TRGV2A0A075B6R0 118 aa1.6□□□□□ -2.15
SKP1-201ENST00000328392 TRGV1A0A0A0MS02 117 aa1.6□□□□□ -2.15
SKP1-201ENST00000328392 TRAV4A0A0B4J268 109 aa1.6□□□□□ -2.15
SKP1-201ENST00000328392 IGHV1-24A0A0C4DH33 117 aa1.6□□□□□ -2.15
SKP1-201ENST00000328392 TRBV27A0A0K0K1C4 114 aa1.6□□□□□ -2.15
SKP1-201ENST00000328392 SYS1-DBNDD2H3BUS1 97 aa1.6□□□□□ -2.15
SKP1-201ENST00000328392 M0QY20 66 aa1.6□□□□□ -2.15
SKP1-201ENST00000328392 UBE2L6O14933 153 aa1.6□□□□□ -2.15
SKP1-201ENST00000328392 NUPR1O60356 82 aa1.6□□□□□ -2.15
SKP1-201ENST00000328392 NPYP01303 97 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms