RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 COPS9Q8WXC6 57 aa13.87□□□□□ -0.19
CRLF3-201ENST00000324238 MALP21145 153 aa13.86□□□□□ -0.19
CRLF3-201ENST00000324238 Q8N3U1 123 aa13.86□□□□□ -0.19
CRLF3-201ENST00000324238 CSNK1G2-AS1Q8NCQ2 148 aa13.86□□□□□ -0.19
CRLF3-201ENST00000324238 LECT2O14960 151 aa13.86□□□□□ -0.19
CRLF3-201ENST00000324238 TRAV13-2A0A0B4J235 113 aa13.85□□□□□ -0.19
CRLF3-201ENST00000324238 C6orf226Q5I0X4 101 aa13.85□□□□□ -0.19
CRLF3-201ENST00000324238 TEP1Q99973 2627 aaKnown RBP13.85□□□□□ -0.19
CRLF3-201ENST00000324238 TRBV6-4A0A1B0GX49 114 aa13.85□□□□□ -0.19
CRLF3-201ENST00000324238 SMIM20Q8N5G0 67 aa13.85□□□□□ -0.19
CRLF3-201ENST00000324238 DNAL4O96015 105 aa13.84□□□□□ -0.19
CRLF3-201ENST00000324238 LINC00482Q8N8I6 264 aa13.84□□□□□ -0.19
CRLF3-201ENST00000324238 RPL28P46779 137 aaKnown RBP13.84□□□□□ -0.19
CRLF3-201ENST00000324238 NCR3O14931 201 aa13.83□□□□□ -0.19
CRLF3-201ENST00000324238 IGLV1-51P01701 117 aa13.83□□□□□ -0.19
CRLF3-201ENST00000324238 IGLV10-54A0A075B6I4 117 aa13.83□□□□□ -0.2
CRLF3-201ENST00000324238 TRBV7-7A0A0K0K1E9 115 aa13.83□□□□□ -0.2
CRLF3-201ENST00000324238 GYPEP15421 78 aa13.83□□□□□ -0.2
CRLF3-201ENST00000324238 LINC00959A0A1B0GUT2 108 aa13.82□□□□□ -0.2
CRLF3-201ENST00000324238 PF4P02776 101 aa13.82□□□□□ -0.2
CRLF3-201ENST00000324238 MRPL23Q16540 153 aaKnown RBP13.81□□□□□ -0.2
CRLF3-201ENST00000324238 SDIM1Q6ZPB5 146 aa13.81□□□□□ -0.2
CRLF3-201ENST00000324238 IGKV3D-7A0A0C4DH55 119 aa13.81□□□□□ -0.2
CRLF3-201ENST00000324238 KRTAP10-3P60369 221 aa13.8□□□□□ -0.2
CRLF3-201ENST00000324238 A0A087WZ39 114 aa13.79□□□□□ -0.2
CRLF3-201ENST00000324238 RNASE1P07998 156 aaKnown RBP13.79□□□□□ -0.2
CRLF3-201ENST00000324238 C9orf116Q5BN46 136 aaPredicted RBP13.79□□□□□ -0.2
CRLF3-201ENST00000324238 LINC00643Q86TS7 51 aa13.79□□□□□ -0.2
CRLF3-201ENST00000324238 OVOL2Q9BRP0 275 aa13.78□□□□□ -0.2
CRLF3-201ENST00000324238 ACYP1P07311 99 aa13.77□□□□□ -0.21
CRLF3-201ENST00000324238 LINC00526Q96FQ7 95 aa13.76□□□□□ -0.21
CRLF3-201ENST00000324238 NSD1Q96L73 2696 aaPredicted RBP13.75□□□□□ -0.21
CRLF3-201ENST00000324238 IBA57-AS1B1ANH7 110 aa13.74□□□□□ -0.21
CRLF3-201ENST00000324238 A0A087WVE0 104 aa13.74□□□□□ -0.21
CRLF3-201ENST00000324238 KLK5Q9Y337 293 aaPredicted RBP13.74□□□□□ -0.21
CRLF3-201ENST00000324238 LINC00846Q9NV44 126 aa13.74□□□□□ -0.21
CRLF3-201ENST00000324238 FLNBO75369 2602 aaKnown RBP13.73□□□□□ -0.21
CRLF3-201ENST00000324238 HIVEP1P15822 2718 aa13.73□□□□□ -0.21
CRLF3-201ENST00000324238 INAFM2P0DMQ5 153 aa13.73□□□□□ -0.21
CRLF3-201ENST00000324238 LINC00269Q8N2A0 174 aa13.73□□□□□ -0.21
CRLF3-201ENST00000324238 FAM222AQ5U5X8 452 aa13.73□□□□□ -0.21
CRLF3-201ENST00000324238 DEFB135Q30KP9 77 aa13.71□□□□□ -0.21
CRLF3-201ENST00000324238 PKD1L1Q8TDX9 2849 aa13.71□□□□□ -0.21
CRLF3-201ENST00000324238 HTN3P15516 51 aa13.71□□□□□ -0.21
CRLF3-201ENST00000324238 HILS1P60008 231 aa13.7□□□□□ -0.22
CRLF3-201ENST00000324238 C9orf153Q5TBE3 101 aa13.7□□□□□ -0.22
CRLF3-201ENST00000324238 SS18Q15532 418 aa13.69□□□□□ -0.22
CRLF3-201ENST00000324238 C16orf95Q9H693 158 aa13.68□□□□□ -0.22
CRLF3-201ENST00000324238 CXCL5P42830 114 aa13.67□□□□□ -0.22
CRLF3-201ENST00000324238 Q8NDZ9 215 aa13.67□□□□□ -0.22
CRLF3-201ENST00000324238 H0YGX0 51 aa13.67□□□□□ -0.22
CRLF3-201ENST00000324238 WFDC9Q8NEX5 89 aa13.67□□□□□ -0.22
CRLF3-201ENST00000324238 ANGP03950 147 aaKnown RBP13.66□□□□□ -0.22
CRLF3-201ENST00000324238 J3QKU1 62 aa13.66□□□□□ -0.22
CRLF3-201ENST00000324238 CMC4P56277 68 aaPredicted RBP13.65□□□□□ -0.22
CRLF3-201ENST00000324238 IMUPQ9GZP8 106 aa13.65□□□□□ -0.22
CRLF3-201ENST00000324238 X6R8D5 127 aa13.65□□□□□ -0.22
CRLF3-201ENST00000324238 INAFM1C9JVW0 142 aa13.65□□□□□ -0.22
CRLF3-201ENST00000324238 NANOS2P60321 138 aaKnown RBP13.65□□□□□ -0.22
CRLF3-201ENST00000324238 LY6G6DO95868 133 aa13.65□□□□□ -0.22
CRLF3-201ENST00000324238 C6orf223Q8N319 242 aa13.65□□□□□ -0.22
CRLF3-201ENST00000324238 C3orf22Q8N5N4 141 aa13.62□□□□□ -0.23
CRLF3-201ENST00000324238 CHCHD10Q8WYQ3 142 aaPredicted RBP13.62□□□□□ -0.23
CRLF3-201ENST00000324238 CYSTM1Q9H1C7 97 aa13.62□□□□□ -0.23
CRLF3-201ENST00000324238 ORMDL1Q9P0S3 153 aa13.62□□□□□ -0.23
CRLF3-201ENST00000324238 PRO0255Q9UI72 69 aa13.62□□□□□ -0.23
CRLF3-201ENST00000324238 C10orf25Q5T742 122 aa13.61□□□□□ -0.23
CRLF3-201ENST00000324238 HIST1H4AP62805 103 aaKnown RBP13.6□□□□□ -0.23
CRLF3-201ENST00000324238 CFAP161Q6P656 301 aa13.6□□□□□ -0.23
CRLF3-201ENST00000324238 KIAA0087Q14695 138 aa13.59□□□□□ -0.23
CRLF3-201ENST00000324238 Q8IZM0 81 aa13.59□□□□□ -0.23
CRLF3-201ENST00000324238 hADV29S1A0JD25 119 aa13.59□□□□□ -0.23
CRLF3-201ENST00000324238 C6orf99Q4VX62 202 aa13.59□□□□□ -0.23
CRLF3-201ENST00000324238 KIR2DL5BQ8NHK3 375 aa13.59□□□□□ -0.23
CRLF3-201ENST00000324238 STAB1Q9NY15 2570 aa13.58□□□□□ -0.24
CRLF3-201ENST00000324238 A0A1B0GX51 115 aa13.58□□□□□ -0.24
CRLF3-201ENST00000324238 REG3AQ06141 175 aa13.58□□□□□ -0.24
CRLF3-201ENST00000324238 UNQ6190/PRO20217Q6UXQ8 127 aa13.58□□□□□ -0.24
CRLF3-201ENST00000324238 FAM110AQ9BQ89 295 aa13.58□□□□□ -0.24
CRLF3-201ENST00000324238 LOC107984640A0A0U1RRK4 108 aa13.57□□□□□ -0.24
CRLF3-201ENST00000324238 PPDPFQ9H3Y8 114 aa13.57□□□□□ -0.24
CRLF3-201ENST00000324238 A0A1B0GUV1 79 aa13.56□□□□□ -0.24
CRLF3-201ENST00000324238 CELA1Q9UNI1 258 aa13.56□□□□□ -0.24
CRLF3-201ENST00000324238 Q8N814 137 aa13.56□□□□□ -0.24
CRLF3-201ENST00000324238 OBSCN-AS1Q96MR7 158 aa13.56□□□□□ -0.24
CRLF3-201ENST00000324238 NOTCH1P46531 2555 aa13.56□□□□□ -0.24
CRLF3-201ENST00000324238 UQCRQO14949 82 aa13.56□□□□□ -0.24
CRLF3-201ENST00000324238 SVIPQ8NHG7 77 aa13.56□□□□□ -0.24
CRLF3-201ENST00000324238 LINC01561Q8N1V8 128 aa13.55□□□□□ -0.24
CRLF3-201ENST00000324238 C2orf48Q96LS8 159 aa13.55□□□□□ -0.24
CRLF3-201ENST00000324238 KMT2BQ9UMN6 2715 aaPredicted RBP13.55□□□□□ -0.24
CRLF3-201ENST00000324238 FBN1P35555 2871 aaKnown RBP13.55□□□□□ -0.24
CRLF3-201ENST00000324238 CD164L2Q6UWJ8 174 aa13.54□□□□□ -0.24
CRLF3-201ENST00000324238 IGHV4-28A0A0C4DH34 117 aa13.53□□□□□ -0.24
CRLF3-201ENST00000324238 COX7CP15954 63 aa13.53□□□□□ -0.24
CRLF3-201ENST00000324238 S100A7L2Q5SY68 101 aa13.53□□□□□ -0.24
CRLF3-201ENST00000324238 LINC00612Q8N6U2 182 aa13.53□□□□□ -0.24
CRLF3-201ENST00000324238 DAD1P61803 113 aa13.52□□□□□ -0.25
CRLF3-201ENST00000324238 F8P00451 2351 aa13.52□□□□□ -0.25
CRLF3-201ENST00000324238 RPL18AQ02543 176 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms