RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 FAM19A1Q7Z5A9 133 aa7.17□□□□□ -1.26
COL12A1-201ENST00000322507 FASNP49327 2511 aaKnown RBP7.17□□□□□ -1.26
COL12A1-201ENST00000322507 XAGE1AQ9HD64 81 aa7.16□□□□□ -1.26
COL12A1-201ENST00000322507 SBSPONQ8IVN8 264 aa7.16□□□□□ -1.26
COL12A1-201ENST00000322507 E7EUB6 86 aa7.16□□□□□ -1.26
COL12A1-201ENST00000322507 ZNF702PQ9H963 129 aa7.16□□□□□ -1.26
COL12A1-201ENST00000322507 PLA2G2EQ9NZK7 142 aa7.16□□□□□ -1.26
COL12A1-201ENST00000322507 SPRNQ5BIV9 151 aa7.15□□□□□ -1.26
COL12A1-201ENST00000322507 MAPKAPK5-AS1Q8N8E1 139 aa7.15□□□□□ -1.26
COL12A1-201ENST00000322507 LMO4P61968 165 aa7.15□□□□□ -1.26
COL12A1-201ENST00000322507 PSMG3-AS1Q96PY0 264 aa7.15□□□□□ -1.27
COL12A1-201ENST00000322507 C6orf48Q9UBA6 75 aa7.15□□□□□ -1.27
COL12A1-201ENST00000322507 POLQO75417 2590 aa7.15□□□□□ -1.27
COL12A1-201ENST00000322507 LY6LH3BQJ8 138 aa7.15□□□□□ -1.27
COL12A1-201ENST00000322507 SYCNQ0VAF6 134 aa7.14□□□□□ -1.27
COL12A1-201ENST00000322507 COL27A1Q8IZC6 1860 aaPredicted RBP7.14□□□□□ -1.27
COL12A1-201ENST00000322507 KLLNB2CW77 178 aa7.14□□□□□ -1.27
COL12A1-201ENST00000322507 LELP1Q5T871 98 aa7.14□□□□□ -1.27
COL12A1-201ENST00000322507 CDKN2A-AS1Q9UH64 79 aa7.14□□□□□ -1.27
COL12A1-201ENST00000322507 Q8IZM0 81 aa7.14□□□□□ -1.27
COL12A1-201ENST00000322507 POM121L12Q8N7R1 296 aa7.14□□□□□ -1.27
COL12A1-201ENST00000322507 USP24Q9UPU5 2620 aa7.14□□□□□ -1.27
COL12A1-201ENST00000322507 C1orf137Q5JT78 98 aa7.13□□□□□ -1.27
COL12A1-201ENST00000322507 LINC01561Q8N1V8 128 aa7.13□□□□□ -1.27
COL12A1-201ENST00000322507 CRIP2P52943 208 aaPredicted RBP7.13□□□□□ -1.27
COL12A1-201ENST00000322507 DEFB131BA0A096LNP1 70 aa7.13□□□□□ -1.27
COL12A1-201ENST00000322507 IGLV4-69A0A075B6H9 119 aa7.13□□□□□ -1.27
COL12A1-201ENST00000322507 Q6ZTI0 123 aa7.12□□□□□ -1.27
COL12A1-201ENST00000322507 Q9BRP9 147 aa7.12□□□□□ -1.27
COL12A1-201ENST00000322507 PRLHP81277 87 aa7.12□□□□□ -1.27
COL12A1-201ENST00000322507 CAMK2N1Q7Z7J9 78 aa7.11□□□□□ -1.27
COL12A1-201ENST00000322507 ZNF580Q9UK33 172 aa7.11□□□□□ -1.27
COL12A1-201ENST00000322507 TM2D3Q9BRN9 247 aa7.11□□□□□ -1.27
COL12A1-201ENST00000322507 LOC101927531A0A1B0GV80 90 aa7.11□□□□□ -1.27
COL12A1-201ENST00000322507 BRI3O95415 125 aa7.11□□□□□ -1.27
COL12A1-201ENST00000322507 Q8NA96 180 aa7.11□□□□□ -1.27
COL12A1-201ENST00000322507 PCOTHQ58A44 107 aa7.1□□□□□ -1.27
COL12A1-201ENST00000322507 X6R8D5 127 aa7.1□□□□□ -1.27
COL12A1-201ENST00000322507 IGLV2-11P01706 119 aa7.09□□□□□ -1.27
COL12A1-201ENST00000322507 C19orf84I3L1E1 186 aa7.09□□□□□ -1.28
COL12A1-201ENST00000322507 FAM19A4Q96LR4 140 aa7.08□□□□□ -1.28
COL12A1-201ENST00000322507 GDF5OSQ5U4N7 250 aa7.08□□□□□ -1.28
COL12A1-201ENST00000322507 TRAV22A0A0B4J277 110 aa7.07□□□□□ -1.28
COL12A1-201ENST00000322507 TSHBP01222 138 aa7.07□□□□□ -1.28
COL12A1-201ENST00000322507 LINC00336Q6ZUF6 198 aa7.07□□□□□ -1.28
COL12A1-201ENST00000322507 LINC00575Q6W349 94 aa7.07□□□□□ -1.28
COL12A1-201ENST00000322507 POLR2KP53803 58 aaKnown RBP7.07□□□□□ -1.28
COL12A1-201ENST00000322507 IGKV2-24A0A0C4DH68 120 aa7.07□□□□□ -1.28
COL12A1-201ENST00000322507 SPINK6Q6UWN8 80 aa7.07□□□□□ -1.28
COL12A1-201ENST00000322507 Q9UF83 564 aa7.07□□□□□ -1.28
COL12A1-201ENST00000322507 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.06□□□□□ -1.28
COL12A1-201ENST00000322507 LOC100131303A0A0U1RQF7 123 aa7.06□□□□□ -1.28
COL12A1-201ENST00000322507 ZNF295-AS1Q8N0V1 137 aa7.06□□□□□ -1.28
COL12A1-201ENST00000322507 IGHV6-1A0A0B4J1U7 121 aa7.06□□□□□ -1.28
COL12A1-201ENST00000322507 SPINK1P00995 79 aa7.06□□□□□ -1.28
COL12A1-201ENST00000322507 C11orf71Q6IPW1 123 aa7.06□□□□□ -1.28
COL12A1-201ENST00000322507 MIR22HGQ0VDD5 57 aa7.05□□□□□ -1.28
COL12A1-201ENST00000322507 CEMP1Q6PRD7 247 aaPredicted RBP7.05□□□□□ -1.28
COL12A1-201ENST00000322507 ZNF843Q8N446 348 aa7.05□□□□□ -1.28
COL12A1-201ENST00000322507 CSNK1G2-AS1Q8NCQ2 148 aa7.05□□□□□ -1.28
COL12A1-201ENST00000322507 IGLV1-40P01703 118 aa7.05□□□□□ -1.28
COL12A1-201ENST00000322507 BRWD1-AS2P59051 145 aa7.05□□□□□ -1.28
COL12A1-201ENST00000322507 CR1P17927 2039 aa7.05□□□□□ -1.28
COL12A1-201ENST00000322507 LINC00846Q9NV44 126 aa7.05□□□□□ -1.28
COL12A1-201ENST00000322507 COX8CQ7Z4L0 72 aa7.05□□□□□ -1.28
COL12A1-201ENST00000322507 TP53TG3Q9ULZ0 132 aa7.05□□□□□ -1.28
COL12A1-201ENST00000322507 CRIP1P50238 77 aa7.04□□□□□ -1.28
COL12A1-201ENST00000322507 RBM12B-AS1Q9P1G2 102 aa7.04□□□□□ -1.28
COL12A1-201ENST00000322507 EGFEM1PQ0D2K5 195 aa7.04□□□□□ -1.28
COL12A1-201ENST00000322507 DCANP1Q8TF63 244 aa7.04□□□□□ -1.28
COL12A1-201ENST00000322507 CDC42SE1Q9NRR8 79 aa7.04□□□□□ -1.28
COL12A1-201ENST00000322507 KPRPQ5T749 579 aaPredicted RBP7.04□□□□□ -1.28
COL12A1-201ENST00000322507 DEFB4AO15263 64 aa7.03□□□□□ -1.28
COL12A1-201ENST00000322507 NUPR2A6NF83 97 aa7.03□□□□□ -1.28
COL12A1-201ENST00000322507 CDC42SE2Q9NRR3 84 aa7.02□□□□□ -1.29
COL12A1-201ENST00000322507 MSMPQ1L6U9 139 aa7.02□□□□□ -1.29
COL12A1-201ENST00000322507 A0A087WYN8 130 aa7.02□□□□□ -1.29
COL12A1-201ENST00000322507 LINC00959A0A1B0GUT2 108 aa7.02□□□□□ -1.29
COL12A1-201ENST00000322507 A0A1B0GUV1 79 aa7.01□□□□□ -1.29
COL12A1-201ENST00000322507 LINC01600Q96MT4 127 aa7.01□□□□□ -1.29
COL12A1-201ENST00000322507 SMIM29Q86T20 159 aa7.01□□□□□ -1.29
COL12A1-201ENST00000322507 CYSRT1A8MQ03 144 aa7.01□□□□□ -1.29
COL12A1-201ENST00000322507 IGIPA6NJ69 53 aa7□□□□□ -1.29
COL12A1-201ENST00000322507 Q6ZSV7 163 aa7□□□□□ -1.29
COL12A1-201ENST00000322507 LOC110117498A0A087WWA1 95 aa7□□□□□ -1.29
COL12A1-201ENST00000322507 KLKP1Q107X0 134 aa7□□□□□ -1.29
COL12A1-201ENST00000322507 FRMD6-AS1P0C7T7 363 aa7□□□□□ -1.29
COL12A1-201ENST00000322507 A8MUN3 132 aa7□□□□□ -1.29
COL12A1-201ENST00000322507 Q6ZS46 218 aa7□□□□□ -1.29
COL12A1-201ENST00000322507 DMAC1Q96GE9 116 aa7□□□□□ -1.29
COL12A1-201ENST00000322507 A0A1W2PNU3 283 aaPredicted RBP6.99□□□□□ -1.29
COL12A1-201ENST00000322507 IGKV2-28A0A075B6P5 120 aa6.99□□□□□ -1.29
COL12A1-201ENST00000322507 IGKV2D-28P01615 120 aa6.99□□□□□ -1.29
COL12A1-201ENST00000322507 CRIP3Q6Q6R5 217 aa6.99□□□□□ -1.29
COL12A1-201ENST00000322507 REG3GQ6UW15 175 aa6.99□□□□□ -1.29
COL12A1-201ENST00000322507 DEFB1P60022 68 aa6.99□□□□□ -1.29
COL12A1-201ENST00000322507 Q6ZPA2 131 aa6.99□□□□□ -1.29
COL12A1-201ENST00000322507 A0A096LNI7 61 aa6.99□□□□□ -1.29
COL12A1-201ENST00000322507 PLA2G5P39877 138 aa6.98□□□□□ -1.29
COL12A1-201ENST00000322507 C2orf48Q96LS8 159 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms