RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 LINC01561Q8N1V8 128 aa6.04□□□□□ -1.44
CLK1-201ENST00000321356 ITPR2Q14571 2701 aa6.03□□□□□ -1.44
CLK1-201ENST00000321356 FAM236AA0A1B0GUQ0 79 aa6.03□□□□□ -1.44
CLK1-201ENST00000321356 FAM236BA0A1B0GV22 79 aa6.03□□□□□ -1.44
CLK1-201ENST00000321356 DNAL4O96015 105 aa6.03□□□□□ -1.44
CLK1-201ENST00000321356 PFN2P35080 140 aa6.03□□□□□ -1.44
CLK1-201ENST00000321356 CXCL5P42830 114 aa6.03□□□□□ -1.44
CLK1-201ENST00000321356 Q8IZM0 81 aa6.03□□□□□ -1.44
CLK1-201ENST00000321356 DEFB130BP0DP73 79 aa6.02□□□□□ -1.44
CLK1-201ENST00000321356 DEFB130AP0DP74 79 aa6.02□□□□□ -1.44
CLK1-201ENST00000321356 GYPEP15421 78 aa6.02□□□□□ -1.44
CLK1-201ENST00000321356 C9orf129Q5T035 196 aaKnown RBP6.02□□□□□ -1.44
CLK1-201ENST00000321356 PAX4O43316 350 aa6.02□□□□□ -1.45
CLK1-201ENST00000321356 HILS1P60008 231 aa6.02□□□□□ -1.45
CLK1-201ENST00000321356 SS18Q15532 418 aa6.02□□□□□ -1.45
CLK1-201ENST00000321356 C6orf226Q5I0X4 101 aa6.02□□□□□ -1.45
CLK1-201ENST00000321356 GAGE2AQ6NT46 116 aa6.02□□□□□ -1.45
CLK1-201ENST00000321356 X6R8D5 127 aa6.02□□□□□ -1.45
CLK1-201ENST00000321356 NBEAL2Q6ZNJ1 2754 aa6.01□□□□□ -1.45
CLK1-201ENST00000321356 FN1P02751 2386 aaKnown RBP6.01□□□□□ -1.45
CLK1-201ENST00000321356 ATP5G1P05496 136 aa6.01□□□□□ -1.45
CLK1-201ENST00000321356 XCL1P47992 114 aa6.01□□□□□ -1.45
CLK1-201ENST00000321356 PRO0255Q9UI72 69 aa6.01□□□□□ -1.45
CLK1-201ENST00000321356 VWFP04275 2813 aa6.01□□□□□ -1.45
CLK1-201ENST00000321356 LECT2O14960 151 aa6□□□□□ -1.45
CLK1-201ENST00000321356 SMIM9A6NGZ8 99 aa6□□□□□ -1.45
CLK1-201ENST00000321356 LINC00482Q8N8I6 264 aa6□□□□□ -1.45
CLK1-201ENST00000321356 LINC00167Q96N53 147 aa6□□□□□ -1.45
CLK1-201ENST00000321356 C11orf68Q9H3H3 251 aaKnown RBP6□□□□□ -1.45
CLK1-201ENST00000321356 KLK5Q9Y337 293 aaPredicted RBP6□□□□□ -1.45
CLK1-201ENST00000321356 UNC79Q9P2D8 2635 aa5.99□□□□□ -1.45
CLK1-201ENST00000321356 NANOS2P60321 138 aaKnown RBP5.99□□□□□ -1.45
CLK1-201ENST00000321356 KRTAP10-3P60369 221 aa5.99□□□□□ -1.45
CLK1-201ENST00000321356 HIST1H4AP62805 103 aaKnown RBP5.99□□□□□ -1.45
CLK1-201ENST00000321356 KIAA0087Q14695 138 aa5.99□□□□□ -1.45
CLK1-201ENST00000321356 OR13C6PQ8NH95 151 aa5.99□□□□□ -1.45
CLK1-201ENST00000321356 C14orf132Q9NPU4 83 aa5.99□□□□□ -1.45
CLK1-201ENST00000321356 A0A1B0GX51 115 aa5.98□□□□□ -1.45
CLK1-201ENST00000321356 NDUFC2O95298 119 aa5.98□□□□□ -1.45
CLK1-201ENST00000321356 COX17Q14061 63 aa5.98□□□□□ -1.45
CLK1-201ENST00000321356 SVIPQ8NHG7 77 aa5.98□□□□□ -1.45
CLK1-201ENST00000321356 LYRM9A8MSI8 78 aa5.98□□□□□ -1.45
CLK1-201ENST00000321356 CLPSL2Q6UWE3 100 aa5.98□□□□□ -1.45
CLK1-201ENST00000321356 CD164L2Q6UWJ8 174 aa5.98□□□□□ -1.45
CLK1-201ENST00000321356 IGHV4-28A0A0C4DH34 117 aa5.97□□□□□ -1.45
CLK1-201ENST00000321356 Q6JHZ5 121 aa5.97□□□□□ -1.45
CLK1-201ENST00000321356 LINC00846Q9NV44 126 aa5.97□□□□□ -1.45
CLK1-201ENST00000321356 ORMDL1Q9P0S3 153 aa5.97□□□□□ -1.45
CLK1-201ENST00000321356 NCR3O14931 201 aa5.96□□□□□ -1.45
CLK1-201ENST00000321356 SLPIP03973 132 aa5.96□□□□□ -1.45
CLK1-201ENST00000321356 LINC00269Q8N2A0 174 aa5.96□□□□□ -1.45
CLK1-201ENST00000321356 C3orf22Q8N5N4 141 aa5.96□□□□□ -1.45
CLK1-201ENST00000321356 TMEM126AQ9H061 195 aa5.96□□□□□ -1.45
CLK1-201ENST00000321356 A0A096LPF7 62 aa5.96□□□□□ -1.46
CLK1-201ENST00000321356 UQCRQO14949 82 aa5.96□□□□□ -1.46
CLK1-201ENST00000321356 CHCHD10Q8WYQ3 142 aaPredicted RBP5.96□□□□□ -1.46
CLK1-201ENST00000321356 LINC00526Q96FQ7 95 aa5.96□□□□□ -1.46
CLK1-201ENST00000321356 PRR3P79522 188 aaKnown RBP5.95□□□□□ -1.46
CLK1-201ENST00000321356 Q8N814 137 aa5.95□□□□□ -1.46
CLK1-201ENST00000321356 CCKP06307 115 aa5.94□□□□□ -1.46
CLK1-201ENST00000321356 CFAP161Q6P656 301 aa5.94□□□□□ -1.46
CLK1-201ENST00000321356 C2orf48Q96LS8 159 aa5.94□□□□□ -1.46
CLK1-201ENST00000321356 HELZ2Q9BYK8 2649 aaKnown RBP5.94□□□□□ -1.46
CLK1-201ENST00000321356 ATOX1O00244 68 aa5.94□□□□□ -1.46
CLK1-201ENST00000321356 REG3AQ06141 175 aa5.94□□□□□ -1.46
CLK1-201ENST00000321356 Q8N3U1 123 aa5.94□□□□□ -1.46
CLK1-201ENST00000321356 Q8NDZ9 215 aa5.94□□□□□ -1.46
CLK1-201ENST00000321356 HIVEP2P31629 2446 aa5.93□□□□□ -1.46
CLK1-201ENST00000321356 JMJD7-PLA2G4BH0Y9G9 81 aa5.93□□□□□ -1.46
CLK1-201ENST00000321356 COX7CP15954 63 aa5.93□□□□□ -1.46
CLK1-201ENST00000321356 C9orf153Q5TBE3 101 aa5.93□□□□□ -1.46
CLK1-201ENST00000321356 SPATA3Q8NHX4 192 aa5.93□□□□□ -1.46
CLK1-201ENST00000321356 TENM1Q9UKZ4 2725 aa5.93□□□□□ -1.46
CLK1-201ENST00000321356 IGLV10-54A0A075B6I4 117 aa5.92□□□□□ -1.46
CLK1-201ENST00000321356 TMEM256-PLSCR3K7ERE1 68 aa5.92□□□□□ -1.46
CLK1-201ENST00000321356 ANGP03950 147 aaKnown RBP5.92□□□□□ -1.46
CLK1-201ENST00000321356 RPL18AQ02543 176 aaKnown RBP5.92□□□□□ -1.46
CLK1-201ENST00000321356 DEFB135Q30KP9 77 aa5.92□□□□□ -1.46
CLK1-201ENST00000321356 C9orf116Q5BN46 136 aaPredicted RBP5.92□□□□□ -1.46
CLK1-201ENST00000321356 MUC7Q8TAX7 377 aa5.92□□□□□ -1.46
CLK1-201ENST00000321356 IGKV3D-7A0A0C4DH55 119 aa5.92□□□□□ -1.46
CLK1-201ENST00000321356 C9orf66Q5T8R8 295 aa5.92□□□□□ -1.46
CLK1-201ENST00000321356 SMIM20Q8N5G0 67 aa5.92□□□□□ -1.46
CLK1-201ENST00000321356 C3orf56Q8N813 242 aa5.92□□□□□ -1.46
CLK1-201ENST00000321356 A0A0J9YWU9 116 aa5.91□□□□□ -1.46
CLK1-201ENST00000321356 DEFB4AO15263 64 aa5.91□□□□□ -1.46
CLK1-201ENST00000321356 IGHV4-30-4P0DP06 118 aa5.91□□□□□ -1.46
CLK1-201ENST00000321356 CRYGAP11844 174 aa5.91□□□□□ -1.46
CLK1-201ENST00000321356 DAD1P61803 113 aa5.91□□□□□ -1.46
CLK1-201ENST00000321356 FASNP49327 2511 aaKnown RBP5.91□□□□□ -1.46
CLK1-201ENST00000321356 APOC4P55056 127 aa5.9□□□□□ -1.46
CLK1-201ENST00000321356 C6orf99Q4VX62 202 aa5.9□□□□□ -1.46
CLK1-201ENST00000321356 LINC00575Q6W349 94 aa5.9□□□□□ -1.46
CLK1-201ENST00000321356 Q8NAQ8 132 aa5.9□□□□□ -1.46
CLK1-201ENST00000321356 SMR3AQ99954 134 aa5.9□□□□□ -1.46
CLK1-201ENST00000321356 CELA1Q9UNI1 258 aa5.9□□□□□ -1.46
CLK1-201ENST00000321356 C10orf25Q5T742 122 aa5.9□□□□□ -1.47
CLK1-201ENST00000321356 PRR34Q9NV39 138 aa5.9□□□□□ -1.47
CLK1-201ENST00000321356 NSD1Q96L73 2696 aaPredicted RBP5.89□□□□□ -1.47
CLK1-201ENST00000321356 HIVEP1P15822 2718 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms