RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 COL6A6A6NMZ7 2263 aa4.35□□□□□ -1.71
SPATA9-202ENST00000316087 SPTBN1Q01082 2364 aaKnown RBP4.35□□□□□ -1.71
SPATA9-202ENST00000316087 HIVEP3Q5T1R4 2406 aa4.35□□□□□ -1.71
SPATA9-202ENST00000316087 MUC6Q6W4X9 2439 aa4.35□□□□□ -1.71
SPATA9-202ENST00000316087 PFN2P35080 140 aa4.34□□□□□ -1.71
SPATA9-202ENST00000316087 Q8N814 137 aa4.34□□□□□ -1.71
SPATA9-202ENST00000316087 CSNK1G2-AS1Q8NCQ2 148 aa4.34□□□□□ -1.71
SPATA9-202ENST00000316087 C2orf48Q96LS8 159 aa4.34□□□□□ -1.71
SPATA9-202ENST00000316087 PRO0255Q9UI72 69 aa4.34□□□□□ -1.71
SPATA9-202ENST00000316087 MED13LQ71F56 2210 aa4.33□□□□□ -1.72
SPATA9-202ENST00000316087 DNAJC9-AS1A6NH13 148 aa4.33□□□□□ -1.72
SPATA9-202ENST00000316087 LYRM9A8MSI8 78 aa4.33□□□□□ -1.72
SPATA9-202ENST00000316087 LYPD5Q6UWN5 251 aa4.33□□□□□ -1.72
SPATA9-202ENST00000316087 MRAPQ8TCY5 172 aa4.33□□□□□ -1.72
SPATA9-202ENST00000316087 RETNQ9HD89 108 aa4.33□□□□□ -1.72
SPATA9-202ENST00000316087 LINC00846Q9NV44 126 aa4.33□□□□□ -1.72
SPATA9-202ENST00000316087 CEP295Q9C0D2 2601 aa4.33□□□□□ -1.72
SPATA9-202ENST00000316087 IGLV4-60A0A075B6I1 120 aa4.32□□□□□ -1.72
SPATA9-202ENST00000316087 LOC110117498A0A087WWA1 95 aa4.32□□□□□ -1.72
SPATA9-202ENST00000316087 BBC3Q96PG8 261 aaPredicted RBP4.32□□□□□ -1.72
SPATA9-202ENST00000316087 DCHS1Q96JQ0 3298 aa4.32□□□□□ -1.72
SPATA9-202ENST00000316087 GIG44P09565 113 aaPredicted RBP4.31□□□□□ -1.72
SPATA9-202ENST00000316087 RBM3P98179 157 aaKnown RBP4.31□□□□□ -1.72
SPATA9-202ENST00000316087 LAMA5O15230 3695 aa4.31□□□□□ -1.72
SPATA9-202ENST00000316087 IGKV3OR2-268A0A0C4DH90 116 aa4.31□□□□□ -1.72
SPATA9-202ENST00000316087 TRBV7-6A0A0J9YX20 115 aa4.31□□□□□ -1.72
SPATA9-202ENST00000316087 NCR3O14931 201 aa4.31□□□□□ -1.72
SPATA9-202ENST00000316087 LINC00336Q6ZUF6 198 aa4.31□□□□□ -1.72
SPATA9-202ENST00000316087 LOC107984640A0A0U1RRK4 108 aa4.3□□□□□ -1.72
SPATA9-202ENST00000316087 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
SPATA9-202ENST00000316087 NDUFC1O43677 76 aa4.3□□□□□ -1.72
SPATA9-202ENST00000316087 RPL35AP18077 110 aaKnown RBP4.3□□□□□ -1.72
SPATA9-202ENST00000316087 XCL1P47992 114 aa4.3□□□□□ -1.72
SPATA9-202ENST00000316087 CXCL6P80162 114 aa4.3□□□□□ -1.72
SPATA9-202ENST00000316087 MAPK1IP1LQ8NDC0 245 aa4.3□□□□□ -1.72
SPATA9-202ENST00000316087 DSCR8Q96T75 97 aa4.3□□□□□ -1.72
SPATA9-202ENST00000316087 IGKV3D-7A0A0C4DH55 119 aa4.29□□□□□ -1.72
SPATA9-202ENST00000316087 A0A0J9YWU9 116 aa4.29□□□□□ -1.72
SPATA9-202ENST00000316087 LOC100131303A0A0U1RQF7 123 aa4.29□□□□□ -1.72
SPATA9-202ENST00000316087 IGHV4-30-4P0DP06 118 aa4.29□□□□□ -1.72
SPATA9-202ENST00000316087 ATP5EP56381 51 aaPredicted RBP4.29□□□□□ -1.72
SPATA9-202ENST00000316087 C9orf66Q5T8R8 295 aa4.29□□□□□ -1.72
SPATA9-202ENST00000316087 LINC00575Q6W349 94 aa4.29□□□□□ -1.72
SPATA9-202ENST00000316087 C6orf223Q8N319 242 aa4.29□□□□□ -1.72
SPATA9-202ENST00000316087 LINC01006Q8NI28 216 aa4.29□□□□□ -1.72
SPATA9-202ENST00000316087 SPTAN1Q13813 2472 aaKnown RBP4.28□□□□□ -1.72
SPATA9-202ENST00000316087 TRAV7A0A075B6U4 112 aa4.28□□□□□ -1.72
SPATA9-202ENST00000316087 GVQW2A0A096LPI5 108 aaPredicted RBP4.28□□□□□ -1.72
SPATA9-202ENST00000316087 APOC4P55056 127 aa4.28□□□□□ -1.72
SPATA9-202ENST00000316087 REG3AQ06141 175 aa4.28□□□□□ -1.72
SPATA9-202ENST00000316087 UPK3BQ9BT76 320 aa4.28□□□□□ -1.72
SPATA9-202ENST00000316087 CR1P17927 2039 aa4.28□□□□□ -1.72
SPATA9-202ENST00000316087 DEFB130BP0DP73 79 aa4.27□□□□□ -1.73
SPATA9-202ENST00000316087 DEFB130AP0DP74 79 aa4.27□□□□□ -1.73
SPATA9-202ENST00000316087 KIAA0087Q14695 138 aa4.27□□□□□ -1.73
SPATA9-202ENST00000316087 C6orf99Q4VX62 202 aa4.27□□□□□ -1.73
SPATA9-202ENST00000316087 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.27□□□□□ -1.73
SPATA9-202ENST00000316087 CHCHD10Q8WYQ3 142 aaPredicted RBP4.27□□□□□ -1.73
SPATA9-202ENST00000316087 DPH3Q96FX2 82 aa4.27□□□□□ -1.73
SPATA9-202ENST00000316087 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
SPATA9-202ENST00000316087 LAMTOR3Q9UHA4 124 aa4.27□□□□□ -1.73
SPATA9-202ENST00000316087 A0A1B0GW54 56 aa4.27□□□□□ -1.73
SPATA9-202ENST00000316087 AKAP6Q13023 2319 aa4.27□□□□□ -1.73
SPATA9-202ENST00000316087 DOPEY1Q5JWR5 2465 aa4.27□□□□□ -1.73
SPATA9-202ENST00000316087 Q6ZQT0 140 aa4.27□□□□□ -1.73
SPATA9-202ENST00000316087 Q6ZVQ6 151 aa4.27□□□□□ -1.73
SPATA9-202ENST00000316087 FAM19A5Q7Z5A7 132 aaPredicted RBP4.27□□□□□ -1.73
SPATA9-202ENST00000316087 IGF2RP11717 2491 aa4.26□□□□□ -1.73
SPATA9-202ENST00000316087 IGLV6-57P01721 117 aa4.26□□□□□ -1.73
SPATA9-202ENST00000316087 ANGP03950 147 aaKnown RBP4.26□□□□□ -1.73
SPATA9-202ENST00000316087 SLPIP03973 132 aa4.26□□□□□ -1.73
SPATA9-202ENST00000316087 NANOS2P60321 138 aaKnown RBP4.26□□□□□ -1.73
SPATA9-202ENST00000316087 LELP1Q5T871 98 aa4.26□□□□□ -1.73
SPATA9-202ENST00000316087 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
SPATA9-202ENST00000316087 LINC00269Q8N2A0 174 aa4.26□□□□□ -1.73
SPATA9-202ENST00000316087 DIRC1Q969H9 104 aa4.26□□□□□ -1.73
SPATA9-202ENST00000316087 ERC2-IT1O76042 136 aa4.25□□□□□ -1.73
SPATA9-202ENST00000316087 MIFP14174 115 aa4.25□□□□□ -1.73
SPATA9-202ENST00000316087 HILS1P60008 231 aa4.25□□□□□ -1.73
SPATA9-202ENST00000316087 DAD1P61803 113 aa4.25□□□□□ -1.73
SPATA9-202ENST00000316087 SPAG11BQ08648 103 aa4.25□□□□□ -1.73
SPATA9-202ENST00000316087 KLKP1Q107X0 134 aa4.25□□□□□ -1.73
SPATA9-202ENST00000316087 C9orf129Q5T035 196 aaKnown RBP4.25□□□□□ -1.73
SPATA9-202ENST00000316087 ENHOQ6UWT2 76 aa4.25□□□□□ -1.73
SPATA9-202ENST00000316087 C3orf56Q8N813 242 aa4.25□□□□□ -1.73
SPATA9-202ENST00000316087 C11orf68Q9H3H3 251 aaKnown RBP4.25□□□□□ -1.73
SPATA9-202ENST00000316087 CSMD1Q96PZ7 3565 aa4.25□□□□□ -1.73
SPATA9-202ENST00000316087 A0A087WVE0 104 aa4.24□□□□□ -1.73
SPATA9-202ENST00000316087 FAM236DA0A1B0GTK5 79 aa4.24□□□□□ -1.73
SPATA9-202ENST00000316087 FAM236CP0DP71 79 aa4.24□□□□□ -1.73
SPATA9-202ENST00000316087 PLA2G2AP14555 144 aa4.24□□□□□ -1.73
SPATA9-202ENST00000316087 KRTAP4-5Q9BYR2 181 aa4.24□□□□□ -1.73
SPATA9-202ENST00000316087 SERP1Q9Y6X1 66 aa4.24□□□□□ -1.73
SPATA9-202ENST00000316087 ATRXP46100 2492 aa4.24□□□□□ -1.73
SPATA9-202ENST00000316087 TRAV23DV6A0A075B6W5 121 aa4.23□□□□□ -1.73
SPATA9-202ENST00000316087 H3BNG1 76 aa4.23□□□□□ -1.73
SPATA9-202ENST00000316087 SPART-AS1P0CW21 52 aa4.23□□□□□ -1.73
SPATA9-202ENST00000316087 LINC01547P58512 204 aaPredicted RBP4.23□□□□□ -1.73
SPATA9-202ENST00000316087 ESM1Q9NQ30 184 aa4.23□□□□□ -1.73
SPATA9-202ENST00000316087 PRR34Q9NV39 138 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms