RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 SPATA25Q9BR10 227 aa4.72□□□□□ -1.65
LYSMD3-201ENST00000315948 FOXI1Q12951 378 aa4.72□□□□□ -1.65
LYSMD3-201ENST00000315948 HIGD2BQ4VC39 106 aa4.72□□□□□ -1.65
LYSMD3-201ENST00000315948 SPANXB1Q9NS25 103 aaPredicted RBP4.72□□□□□ -1.65
LYSMD3-201ENST00000315948 A0A1B0GWB2 263 aa4.71□□□□□ -1.66
LYSMD3-201ENST00000315948 TAL2Q16559 108 aa4.71□□□□□ -1.66
LYSMD3-201ENST00000315948 MIR7-3HGQ8N6C7 128 aa4.71□□□□□ -1.66
LYSMD3-201ENST00000315948 TMEM238C9JI98 176 aa4.71□□□□□ -1.66
LYSMD3-201ENST00000315948 SS18Q15532 418 aa4.71□□□□□ -1.66
LYSMD3-201ENST00000315948 MIAQ16674 131 aa4.71□□□□□ -1.66
LYSMD3-201ENST00000315948 C6orf226Q5I0X4 101 aa4.71□□□□□ -1.66
LYSMD3-201ENST00000315948 Q8NDZ9 215 aa4.71□□□□□ -1.66
LYSMD3-201ENST00000315948 LINC00308Q8TCZ7 52 aa4.71□□□□□ -1.66
LYSMD3-201ENST00000315948 LECT2O14960 151 aa4.7□□□□□ -1.66
LYSMD3-201ENST00000315948 LINC00588Q9Y4M8 146 aa4.7□□□□□ -1.66
LYSMD3-201ENST00000315948 LINC00158P58513 81 aa4.7□□□□□ -1.66
LYSMD3-201ENST00000315948 KIAA0087Q14695 138 aa4.7□□□□□ -1.66
LYSMD3-201ENST00000315948 UNQ6190/PRO20217Q6UXQ8 127 aa4.7□□□□□ -1.66
LYSMD3-201ENST00000315948 K7EP34 96 aa4.7□□□□□ -1.66
LYSMD3-201ENST00000315948 FABP2P12104 132 aa4.7□□□□□ -1.66
LYSMD3-201ENST00000315948 COX7A2LO14548 114 aa4.69□□□□□ -1.66
LYSMD3-201ENST00000315948 MALP21145 153 aa4.69□□□□□ -1.66
LYSMD3-201ENST00000315948 CD164L2Q6UWJ8 174 aa4.69□□□□□ -1.66
LYSMD3-201ENST00000315948 WFDC2Q14508 124 aa4.69□□□□□ -1.66
LYSMD3-201ENST00000315948 Q1RN00 199 aa4.69□□□□□ -1.66
LYSMD3-201ENST00000315948 PRO1854Q9UHT4 67 aa4.69□□□□□ -1.66
LYSMD3-201ENST00000315948 SRRM2Q9UQ35 2752 aaKnown RBP4.69□□□□□ -1.66
LYSMD3-201ENST00000315948 DNAH2Q9P225 4427 aa4.69□□□□□ -1.66
LYSMD3-201ENST00000315948 PSMB2P49721 201 aa4.69□□□□□ -1.66
LYSMD3-201ENST00000315948 PRR34Q9NV39 138 aa4.69□□□□□ -1.66
LYSMD3-201ENST00000315948 DYNC2H1Q8NCM8 4307 aaKnown RBP4.69□□□□□ -1.66
LYSMD3-201ENST00000315948 TCL1BO95988 128 aa4.68□□□□□ -1.66
LYSMD3-201ENST00000315948 SH2D6Q7Z4S9 175 aa4.68□□□□□ -1.66
LYSMD3-201ENST00000315948 KRTAP1-5Q9BYS1 174 aa4.68□□□□□ -1.66
LYSMD3-201ENST00000315948 VPS13DQ5THJ4 4388 aa4.68□□□□□ -1.66
LYSMD3-201ENST00000315948 CLEC2BQ92478 149 aa4.68□□□□□ -1.66
LYSMD3-201ENST00000315948 TRIAP1O43715 76 aa4.68□□□□□ -1.66
LYSMD3-201ENST00000315948 RPL24P83731 157 aaKnown RBP4.68□□□□□ -1.66
LYSMD3-201ENST00000315948 SPANXDQ9BXN6 97 aa4.68□□□□□ -1.66
LYSMD3-201ENST00000315948 SPANXCQ9NY87 97 aa4.68□□□□□ -1.66
LYSMD3-201ENST00000315948 IGKV2-28A0A075B6P5 120 aa4.67□□□□□ -1.66
LYSMD3-201ENST00000315948 IGKV2D-28P01615 120 aa4.67□□□□□ -1.66
LYSMD3-201ENST00000315948 CCL18P55774 89 aa4.67□□□□□ -1.66
LYSMD3-201ENST00000315948 LINC00337Q8N6G1 96 aa4.67□□□□□ -1.66
LYSMD3-201ENST00000315948 IGKV2D-24A0A075B6R9 120 aa4.67□□□□□ -1.66
LYSMD3-201ENST00000315948 TMEM238LA0A1B0GVL6 79 aa4.67□□□□□ -1.66
LYSMD3-201ENST00000315948 A6NJY4 79 aa4.67□□□□□ -1.66
LYSMD3-201ENST00000315948 RPL13AP40429 203 aaKnown RBP4.67□□□□□ -1.66
LYSMD3-201ENST00000315948 SMAGPQ0VAQ4 97 aa4.67□□□□□ -1.66
LYSMD3-201ENST00000315948 KRTAP26-1Q6PEX3 210 aa4.67□□□□□ -1.66
LYSMD3-201ENST00000315948 CRPP02741 224 aa4.67□□□□□ -1.66
LYSMD3-201ENST00000315948 HYDINQ4G0P3 5121 aa4.67□□□□□ -1.66
LYSMD3-201ENST00000315948 CKS1BP61024 79 aa4.66□□□□□ -1.66
LYSMD3-201ENST00000315948 XAGE1AQ9HD64 81 aa4.66□□□□□ -1.66
LYSMD3-201ENST00000315948 ERG28Q9UKR5 140 aa4.66□□□□□ -1.66
LYSMD3-201ENST00000315948 TRAV10A0A0B4J240 114 aa4.66□□□□□ -1.66
LYSMD3-201ENST00000315948 TEX48A0A1B0GUV7 120 aa4.66□□□□□ -1.66
LYSMD3-201ENST00000315948 SCGB1C2P0DMR2 95 aa4.66□□□□□ -1.66
LYSMD3-201ENST00000315948 SMCPP49901 116 aaPredicted RBP4.66□□□□□ -1.66
LYSMD3-201ENST00000315948 SPAG11BQ08648 103 aa4.66□□□□□ -1.66
LYSMD3-201ENST00000315948 CIRBPQ14011 172 aaKnown RBP4.65□□□□□ -1.66
LYSMD3-201ENST00000315948 ETDBQ3ZM63 59 aa4.65□□□□□ -1.67
LYSMD3-201ENST00000315948 C15orf56Q8N910 161 aa4.65□□□□□ -1.67
LYSMD3-201ENST00000315948 SND1-IT1Q9HBX3 110 aa4.65□□□□□ -1.67
LYSMD3-201ENST00000315948 Q8IZM0 81 aa4.65□□□□□ -1.67
LYSMD3-201ENST00000315948 FUSP35637 526 aaKnown RBP eCLIP4.64□□□□□ -1.67
LYSMD3-201ENST00000315948 PRO0461Q9UI25 63 aa4.64□□□□□ -1.67
LYSMD3-201ENST00000315948 A0A0B4J2C4 111 aa4.64□□□□□ -1.67
LYSMD3-201ENST00000315948 H3BNG1 76 aa4.64□□□□□ -1.67
LYSMD3-201ENST00000315948 CFAP161Q6P656 301 aa4.64□□□□□ -1.67
LYSMD3-201ENST00000315948 GTF2H5Q6ZYL4 71 aa4.64□□□□□ -1.67
LYSMD3-201ENST00000315948 C6orf48Q9UBA6 75 aa4.64□□□□□ -1.67
LYSMD3-201ENST00000315948 SLPIP03973 132 aa4.64□□□□□ -1.67
LYSMD3-201ENST00000315948 FAM218AQ96MZ4 157 aa4.64□□□□□ -1.67
LYSMD3-201ENST00000315948 NCR3O14931 201 aa4.63□□□□□ -1.67
LYSMD3-201ENST00000315948 B9D2Q9BPU9 175 aa4.63□□□□□ -1.67
LYSMD3-201ENST00000315948 TIMM17BO60830 172 aa4.63□□□□□ -1.67
LYSMD3-201ENST00000315948 RNF151Q2KHN1 245 aa4.63□□□□□ -1.67
LYSMD3-201ENST00000315948 HERV-K104P63124 156 aa4.63□□□□□ -1.67
LYSMD3-201ENST00000315948 LINC01556Q5JQF7 62 aa4.63□□□□□ -1.67
LYSMD3-201ENST00000315948 Q6ZRU5 148 aa4.63□□□□□ -1.67
LYSMD3-201ENST00000315948 FRAS1Q86XX4 4008 aa4.63□□□□□ -1.67
LYSMD3-201ENST00000315948 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.62□□□□□ -1.67
LYSMD3-201ENST00000315948 LINC01620Q4KN68 170 aa4.62□□□□□ -1.67
LYSMD3-201ENST00000315948 OR13C6PQ8NH95 151 aa4.62□□□□□ -1.67
LYSMD3-201ENST00000315948 C1orf43Q9BWL3 253 aa4.62□□□□□ -1.67
LYSMD3-201ENST00000315948 IBA57-AS1B1ANH7 110 aa4.62□□□□□ -1.67
LYSMD3-201ENST00000315948 GAGE2EQ4V326 116 aa4.62□□□□□ -1.67
LYSMD3-201ENST00000315948 GAGE2DQ9UEU5 116 aa4.62□□□□□ -1.67
LYSMD3-201ENST00000315948 TRAV8-4A0A0B4J246 113 aa4.62□□□□□ -1.67
LYSMD3-201ENST00000315948 A0A1B0GV72 72 aa4.62□□□□□ -1.67
LYSMD3-201ENST00000315948 C9JAW5 83 aa4.61□□□□□ -1.67
LYSMD3-201ENST00000315948 M0R2N4 97 aa4.61□□□□□ -1.67
LYSMD3-201ENST00000315948 DNAH10OSP0CZ25 163 aa4.61□□□□□ -1.67
LYSMD3-201ENST00000315948 OCIAD2Q56VL3 154 aa4.61□□□□□ -1.67
LYSMD3-201ENST00000315948 DNAH6Q9C0G6 4158 aa4.61□□□□□ -1.67
LYSMD3-201ENST00000315948 IFITM1P13164 125 aa4.61□□□□□ -1.67
LYSMD3-201ENST00000315948 NTN5Q8WTR8 489 aaPredicted RBP4.61□□□□□ -1.67
LYSMD3-201ENST00000315948 KLK5Q9Y337 293 aaPredicted RBP4.61□□□□□ -1.67
LYSMD3-201ENST00000315948 SMIM11BQ8TCY0 68 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms