RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CDIP1Q9H305 208 aa6.36□□□□□ -1.39
COL6A5-202ENST00000312481 Q9HAA7 133 aa6.36□□□□□ -1.39
COL6A5-202ENST00000312481 C10orf25Q5T742 122 aa6.35□□□□□ -1.39
COL6A5-202ENST00000312481 NCR3O14931 201 aa6.35□□□□□ -1.39
COL6A5-202ENST00000312481 VPREB1P12018 145 aa6.35□□□□□ -1.39
COL6A5-202ENST00000312481 HELZ2Q9BYK8 2649 aaKnown RBP6.35□□□□□ -1.39
COL6A5-202ENST00000312481 DEFB135Q30KP9 77 aa6.35□□□□□ -1.39
COL6A5-202ENST00000312481 Q6ZSV7 163 aa6.35□□□□□ -1.39
COL6A5-202ENST00000312481 A0A096LPF7 62 aa6.35□□□□□ -1.39
COL6A5-202ENST00000312481 GCN1Q92616 2671 aaKnown RBP6.35□□□□□ -1.39
COL6A5-202ENST00000312481 C1orf195Q5TG92 126 aa6.35□□□□□ -1.39
COL6A5-202ENST00000312481 Q6ZQY7 126 aa6.35□□□□□ -1.39
COL6A5-202ENST00000312481 Q8N9L7 120 aa6.35□□□□□ -1.39
COL6A5-202ENST00000312481 IGHV4-28A0A0C4DH34 117 aa6.35□□□□□ -1.39
COL6A5-202ENST00000312481 ATRQ13535 2644 aa6.34□□□□□ -1.39
COL6A5-202ENST00000312481 PRR9Q5T870 116 aa6.34□□□□□ -1.39
COL6A5-202ENST00000312481 LINC00575Q6W349 94 aa6.34□□□□□ -1.39
COL6A5-202ENST00000312481 IGLV10-54A0A075B6I4 117 aa6.34□□□□□ -1.39
COL6A5-202ENST00000312481 C7orf33Q8WU49 177 aa6.34□□□□□ -1.4
COL6A5-202ENST00000312481 Q6ZS46 218 aa6.33□□□□□ -1.4
COL6A5-202ENST00000312481 A8MTW9 85 aa6.33□□□□□ -1.4
COL6A5-202ENST00000312481 H0Y9J4 135 aa6.33□□□□□ -1.4
COL6A5-202ENST00000312481 MAST4O15021 2626 aa6.33□□□□□ -1.4
COL6A5-202ENST00000312481 RPL37AP61513 92 aaKnown RBP6.33□□□□□ -1.4
COL6A5-202ENST00000312481 ESM1Q9NQ30 184 aa6.33□□□□□ -1.4
COL6A5-202ENST00000312481 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
COL6A5-202ENST00000312481 CELA1Q9UNI1 258 aa6.32□□□□□ -1.4
COL6A5-202ENST00000312481 PRB1P04280 392 aa6.32□□□□□ -1.4
COL6A5-202ENST00000312481 CASC2Q6XLA1 102 aa6.32□□□□□ -1.4
COL6A5-202ENST00000312481 ESRGQ1W209 222 aa6.32□□□□□ -1.4
COL6A5-202ENST00000312481 SPATA3Q8NHX4 192 aa6.32□□□□□ -1.4
COL6A5-202ENST00000312481 WFDC11Q8NEX6 87 aa6.31□□□□□ -1.4
COL6A5-202ENST00000312481 IGKV4-1P06312 121 aa6.31□□□□□ -1.4
COL6A5-202ENST00000312481 TMEM254Q8TBM7 123 aa6.31□□□□□ -1.4
COL6A5-202ENST00000312481 IGHV3OR16-9A0A0B4J2B5 98 aa6.31□□□□□ -1.4
COL6A5-202ENST00000312481 PRB2P02812 416 aaPredicted RBP6.31□□□□□ -1.4
COL6A5-202ENST00000312481 FHL3Q13643 280 aa6.31□□□□□ -1.4
COL6A5-202ENST00000312481 DEFB131BA0A096LNP1 70 aa6.31□□□□□ -1.4
COL6A5-202ENST00000312481 FAM19A5Q7Z5A7 132 aaPredicted RBP6.3□□□□□ -1.4
COL6A5-202ENST00000312481 A6NED7 52 aa6.3□□□□□ -1.4
COL6A5-202ENST00000312481 Q8N3U1 123 aa6.3□□□□□ -1.4
COL6A5-202ENST00000312481 NUPR2A6NF83 97 aa6.29□□□□□ -1.4
COL6A5-202ENST00000312481 ELOF1P60002 83 aaKnown RBP6.29□□□□□ -1.4
COL6A5-202ENST00000312481 C1orf137Q5JT78 98 aa6.29□□□□□ -1.4
COL6A5-202ENST00000312481 KPRPQ5T749 579 aaPredicted RBP6.29□□□□□ -1.4
COL6A5-202ENST00000312481 C11orf72Q8NBR9 251 aa6.29□□□□□ -1.4
COL6A5-202ENST00000312481 LY6G6DO95868 133 aa6.28□□□□□ -1.4
COL6A5-202ENST00000312481 REG3GQ6UW15 175 aa6.28□□□□□ -1.4
COL6A5-202ENST00000312481 CYP4F30PQ9H0H9 118 aa6.28□□□□□ -1.4
COL6A5-202ENST00000312481 LINC00694P0DN24 101 aa6.28□□□□□ -1.4
COL6A5-202ENST00000312481 CYSRT1A8MQ03 144 aa6.28□□□□□ -1.4
COL6A5-202ENST00000312481 LINC01547P58512 204 aaPredicted RBP6.28□□□□□ -1.4
COL6A5-202ENST00000312481 MAPK1IP1LQ8NDC0 245 aa6.28□□□□□ -1.4
COL6A5-202ENST00000312481 A0A0J9YWU9 116 aa6.28□□□□□ -1.4
COL6A5-202ENST00000312481 IGHV4-30-4P0DP06 118 aa6.28□□□□□ -1.4
COL6A5-202ENST00000312481 KLKP1Q107X0 134 aa6.28□□□□□ -1.4
COL6A5-202ENST00000312481 ODF3L2Q3SX64 289 aa6.28□□□□□ -1.4
COL6A5-202ENST00000312481 CEMP1Q6PRD7 247 aaPredicted RBP6.28□□□□□ -1.4
COL6A5-202ENST00000312481 LINC00315P59091 139 aa6.27□□□□□ -1.4
COL6A5-202ENST00000312481 FHL2Q14192 279 aa6.27□□□□□ -1.41
COL6A5-202ENST00000312481 ADAMTSL4-AS1Q5T5F5 129 aa6.26□□□□□ -1.41
COL6A5-202ENST00000312481 TSPEAR-AS2P59090 65 aa6.26□□□□□ -1.41
COL6A5-202ENST00000312481 LINC01006Q8NI28 216 aa6.26□□□□□ -1.41
COL6A5-202ENST00000312481 LINC01556Q5JQF7 62 aa6.25□□□□□ -1.41
COL6A5-202ENST00000312481 NBEAL1Q6ZS30 2694 aa6.25□□□□□ -1.41
COL6A5-202ENST00000312481 C1orf158Q8N1D5 194 aa6.25□□□□□ -1.41
COL6A5-202ENST00000312481 Q6ZVQ6 151 aa6.24□□□□□ -1.41
COL6A5-202ENST00000312481 C6orf223Q8N319 242 aa6.24□□□□□ -1.41
COL6A5-202ENST00000312481 RETNQ9HD89 108 aa6.24□□□□□ -1.41
COL6A5-202ENST00000312481 TRBV7-4A0A0J9YYF1 115 aa6.24□□□□□ -1.41
COL6A5-202ENST00000312481 LINC00337Q8N6G1 96 aa6.24□□□□□ -1.41
COL6A5-202ENST00000312481 WFDC10AQ9H1F0 79 aa6.24□□□□□ -1.41
COL6A5-202ENST00000312481 C22orf34Q6ZV56 151 aa6.24□□□□□ -1.41
COL6A5-202ENST00000312481 HECTD1Q9ULT8 2610 aa6.23□□□□□ -1.41
COL6A5-202ENST00000312481 MOBPQ13875 183 aa6.23□□□□□ -1.41
COL6A5-202ENST00000312481 MGAM2Q2M2H8 2515 aa6.23□□□□□ -1.41
COL6A5-202ENST00000312481 FLNBO75369 2602 aaKnown RBP6.23□□□□□ -1.41
COL6A5-202ENST00000312481 FAM19A1Q7Z5A9 133 aa6.23□□□□□ -1.41
COL6A5-202ENST00000312481 PLAC8L1A1L4L8 177 aa6.22□□□□□ -1.41
COL6A5-202ENST00000312481 PLA2G5P39877 138 aa6.22□□□□□ -1.41
COL6A5-202ENST00000312481 IGLV6-57P01721 117 aa6.21□□□□□ -1.41
COL6A5-202ENST00000312481 XAGE1AQ9HD64 81 aa6.21□□□□□ -1.41
COL6A5-202ENST00000312481 BBC3Q96PG8 261 aaPredicted RBP6.21□□□□□ -1.42
COL6A5-202ENST00000312481 LINC00846Q9NV44 126 aa6.21□□□□□ -1.42
COL6A5-202ENST00000312481 LINC00208Q96KT6 92 aa6.21□□□□□ -1.42
COL6A5-202ENST00000312481 A0A087WYN8 130 aa6.2□□□□□ -1.42
COL6A5-202ENST00000312481 PMAIP1Q13794 54 aa6.2□□□□□ -1.42
COL6A5-202ENST00000312481 Q6ZQT0 140 aa6.2□□□□□ -1.42
COL6A5-202ENST00000312481 CHD6Q8TD26 2715 aa6.2□□□□□ -1.42
COL6A5-202ENST00000312481 DNAH12Q6ZR08 3092 aa6.2□□□□□ -1.42
COL6A5-202ENST00000312481 Q8NBF4 154 aa6.2□□□□□ -1.42
COL6A5-202ENST00000312481 PLA2G2DQ9UNK4 145 aa6.19□□□□□ -1.42
COL6A5-202ENST00000312481 GAS8-AS1O95177 125 aa6.19□□□□□ -1.42
COL6A5-202ENST00000312481 SPANXA2-OT1Q8N9U9 137 aa6.19□□□□□ -1.42
COL6A5-202ENST00000312481 C3orf84H3BNL1 204 aa6.18□□□□□ -1.42
COL6A5-202ENST00000312481 LINC00167Q96N53 147 aa6.18□□□□□ -1.42
COL6A5-202ENST00000312481 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.18□□□□□ -1.42
COL6A5-202ENST00000312481 COX6A2Q02221 97 aa6.18□□□□□ -1.42
COL6A5-202ENST00000312481 SMCPP49901 116 aaPredicted RBP6.17□□□□□ -1.42
COL6A5-202ENST00000312481 MPLKIPQ8TAP9 179 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms