RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 KIAA0087Q14695 138 aa8.58□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 Q6ZVH6 145 aa8.57□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 UBE2DNLQ8IWF7 75 aa8.57□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 CEND1Q8N111 149 aa8.57□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 HIST1H4GQ99525 98 aa8.57□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 LITAFQ99732 161 aa8.57□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 C1orf43Q9BWL3 253 aa8.57□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 TMEM238C9JI98 176 aa8.56□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 C6orf226Q5I0X4 101 aa8.56□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 ORAOV1Q8WV07 137 aa8.56□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 TOMM7Q9P0U1 55 aa8.56□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 PRSS2P07478 247 aa8.56□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 CXCL5P42830 114 aa8.56□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 SRSF9Q13242 221 aaKnown RBP eCLIP8.56□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 CIRBPQ14011 172 aaKnown RBP8.56□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 RMI2Q96E14 147 aa8.56□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 SPANXDQ9BXN6 97 aa8.55□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 SPANXCQ9NY87 97 aa8.55□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 PTTG1IPP53801 180 aa8.54□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 COL5A1-AS1Q5SY13 56 aa8.54□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 LINC00476Q8WZB0 136 aa8.54□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 KRTAP1-5Q9BYS1 174 aa8.54□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 COX11Q9Y6N1 276 aa8.54□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 IGKV2D-24A0A075B6R9 120 aa8.53□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 GCSHP23434 173 aa8.53□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 BATFQ16520 125 aa8.53□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 ADAMTSL4-AS1Q5T5F5 129 aa8.53□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 PPDPFQ9H3Y8 114 aa8.53□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 IFITM1P13164 125 aa8.53□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 FXYD2P54710 66 aa8.53□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 CFAP161Q6P656 301 aa8.53□□□□□ -1.04
SHANK2-AS3-201ENST00000307548 A6NDN8 102 aa8.52□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 F8WDY8 70 aa8.52□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 CKS1BP61024 79 aa8.52□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 DNAH6Q9C0G6 4158 aa8.51□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 SPAG11BQ08648 103 aa8.51□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 Q9HAA7 133 aa8.51□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 GHRHP01286 108 aa8.5□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 TTC32Q5I0X7 151 aa8.5□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 MEIG1Q5JSS6 88 aa8.5□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 NTN5Q8WTR8 489 aaPredicted RBP8.5□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 NBDYA0A0U1RRE5 68 aa8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 A0A1B0GWB2 263 aa8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 COX17Q14061 63 aa8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 MUSTN1Q8IVN3 82 aa8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 C15orf56Q8N910 161 aa8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 COPS9Q8WXC6 57 aa8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 C2orf48Q96LS8 159 aa8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 DNAH10Q8IVF4 4471 aa8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 GVQW2A0A096LPI5 108 aaPredicted RBP8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 LY6G6CO95867 125 aa8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 SMIM13P0DJ93 91 aa8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 RPL24P83731 157 aaKnown RBP8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 ERG28Q9UKR5 140 aa8.49□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 Q6ZR54 194 aa8.48□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 KMT2AQ03164 3969 aa8.47□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 ZNF561-AS1K7EIQ3 104 aa8.47□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 EPPK1P58107 5090 aaKnown RBP8.47□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 UNQ6190/PRO20217Q6UXQ8 127 aa8.46□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 C6orf223Q8N319 242 aa8.46□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 LINC00308Q8TCZ7 52 aa8.46□□□□□ -1.05
SHANK2-AS3-201ENST00000307548 TRBV30A0A0K0K1B3 111 aa8.46□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 TAX1BP3O14907 124 aa8.46□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 LINC00158P58513 81 aa8.46□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 NHP2Q9NX24 153 aaKnown RBP8.46□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.45□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 LOC107984156A0A0G2JMH3 177 aa8.45□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 A4D1N5 150 aa8.45□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 C10orf25Q5T742 122 aa8.45□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 ARL17AQ8IVW1 177 aa8.45□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 A0A0U1RRA0 63 aa8.44□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 LCE6AA0A183 80 aa8.44□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 MIR7-3HGQ8N6C7 128 aa8.44□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 DAND5Q8N907 189 aa8.44□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 USP17L23D6RBM5 183 aa8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 CFC1BP0CG36 223 aa8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 CFC1P0CG37 223 aa8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 HIGD2BQ4VC39 106 aa8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 SOSTDC1Q6X4U4 206 aa8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 LINC00526Q96FQ7 95 aa8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 CAMK2N2Q96S95 79 aa8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 DNAH2Q9P225 4427 aa8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 A0A0B4J2C4 111 aa8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 M0R2N4 97 aa8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 EIF4EBP3O60516 100 aaPredicted RBP8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 PFN2P35080 140 aa8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 RNF151Q2KHN1 245 aa8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 C6orf48Q9UBA6 75 aa8.43□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 Q6ZRN7 208 aaPredicted RBP8.42□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 C9orf118A6NHY6 69 aa8.4□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 LCE2BO14633 110 aa8.4□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 SYCNQ0VAF6 134 aa8.4□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 C9orf116Q5BN46 136 aaPredicted RBP8.4□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 Q6ZRU5 148 aa8.4□□□□□ -1.06
SHANK2-AS3-201ENST00000307548 K7ERJ3 54 aa8.4□□□□□ -1.07
SHANK2-AS3-201ENST00000307548 NPC2P61916 151 aa8.4□□□□□ -1.07
SHANK2-AS3-201ENST00000307548 PRO1854Q9UHT4 67 aa8.4□□□□□ -1.07
SHANK2-AS3-201ENST00000307548 FRAS1Q86XX4 4008 aa8.39□□□□□ -1.07
SHANK2-AS3-201ENST00000307548 A0A1B0GV90 55 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms