RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 DYNLRB2Q8TF09 96 aa11.56□□□□□ -0.56
CCDC8-201ENST00000307522 UBE2E2Q96LR5 201 aa11.56□□□□□ -0.56
CCDC8-201ENST00000307522 ENHOQ6UWT2 76 aa11.55□□□□□ -0.56
CCDC8-201ENST00000307522 MIR7-3HGQ8N6C7 128 aa11.55□□□□□ -0.56
CCDC8-201ENST00000307522 SMIM11BQ8TCY0 68 aa11.55□□□□□ -0.56
CCDC8-201ENST00000307522 TMEM243Q9BU79 118 aa11.55□□□□□ -0.56
CCDC8-201ENST00000307522 WIPF1O43516 503 aa11.55□□□□□ -0.56
CCDC8-201ENST00000307522 PFN2P35080 140 aa11.55□□□□□ -0.56
CCDC8-201ENST00000307522 SNRPD3P62318 126 aaKnown RBP11.55□□□□□ -0.56
CCDC8-201ENST00000307522 FSHBP01225 129 aa11.54□□□□□ -0.56
CCDC8-201ENST00000307522 SMIM1B2RUZ4 78 aa11.54□□□□□ -0.56
CCDC8-201ENST00000307522 H3BUA1 57 aa11.54□□□□□ -0.56
CCDC8-201ENST00000307522 RPL36AP83881 106 aaKnown RBP11.54□□□□□ -0.56
CCDC8-201ENST00000307522 RPL36ALQ969Q0 106 aaKnown RBP11.54□□□□□ -0.56
CCDC8-201ENST00000307522 A0A0U1RQV1 116 aa11.53□□□□□ -0.56
CCDC8-201ENST00000307522 RPL35AP18077 110 aaKnown RBP11.53□□□□□ -0.56
CCDC8-201ENST00000307522 XCL2Q9UBD3 114 aa11.53□□□□□ -0.56
CCDC8-201ENST00000307522 SNURFQ9Y675 71 aa11.53□□□□□ -0.56
CCDC8-201ENST00000307522 SND1-IT1Q9HBX3 110 aa11.52□□□□□ -0.57
CCDC8-201ENST00000307522 IGKV2-28A0A075B6P5 120 aa11.52□□□□□ -0.57
CCDC8-201ENST00000307522 TIMM17BO60830 172 aa11.52□□□□□ -0.57
CCDC8-201ENST00000307522 IGKV2D-28P01615 120 aa11.52□□□□□ -0.57
CCDC8-201ENST00000307522 LINC00158P58513 81 aa11.52□□□□□ -0.57
CCDC8-201ENST00000307522 KLK9Q2XQG4 91 aa11.52□□□□□ -0.57
CCDC8-201ENST00000307522 NOTCH1P46531 2555 aa11.51□□□□□ -0.57
CCDC8-201ENST00000307522 FBN1P35555 2871 aaKnown RBP11.5□□□□□ -0.57
CCDC8-201ENST00000307522 K7EQG2 157 aa11.5□□□□□ -0.57
CCDC8-201ENST00000307522 KRTAP1-1Q07627 177 aa11.5□□□□□ -0.57
CCDC8-201ENST00000307522 Q6JHZ5 121 aa11.48□□□□□ -0.57
CCDC8-201ENST00000307522 PAX4O43316 350 aa11.48□□□□□ -0.57
CCDC8-201ENST00000307522 RBMY1BA6NDE4 496 aaKnown RBP11.47□□□□□ -0.57
CCDC8-201ENST00000307522 RBMY1EA6NEQ0 496 aaKnown RBP11.47□□□□□ -0.57
CCDC8-201ENST00000307522 RBMY1DP0C7P1 496 aaKnown RBP11.47□□□□□ -0.57
CCDC8-201ENST00000307522 PRR3P79522 188 aaKnown RBP11.47□□□□□ -0.57
CCDC8-201ENST00000307522 Q6ZTI0 123 aa11.47□□□□□ -0.57
CCDC8-201ENST00000307522 INAFM1C9JVW0 142 aa11.47□□□□□ -0.57
CCDC8-201ENST00000307522 FAM222AQ5U5X8 452 aa11.47□□□□□ -0.57
CCDC8-201ENST00000307522 LINC01006Q8NI28 216 aa11.47□□□□□ -0.57
CCDC8-201ENST00000307522 K7EMT4 169 aa11.47□□□□□ -0.57
CCDC8-201ENST00000307522 IGLV5-39A0A0G2JS06 123 aa11.46□□□□□ -0.58
CCDC8-201ENST00000307522 CCL24O00175 119 aa11.46□□□□□ -0.58
CCDC8-201ENST00000307522 COL6A5A8TX70 2615 aa11.45□□□□□ -0.58
CCDC8-201ENST00000307522 LINC00474Q9P2X8 69 aa11.45□□□□□ -0.58
CCDC8-201ENST00000307522 SPATA3Q8NHX4 192 aa11.45□□□□□ -0.58
CCDC8-201ENST00000307522 PKD1L1Q8TDX9 2849 aa11.45□□□□□ -0.58
CCDC8-201ENST00000307522 FAM236DA0A1B0GTK5 79 aa11.45□□□□□ -0.58
CCDC8-201ENST00000307522 FAM236CP0DP71 79 aa11.45□□□□□ -0.58
CCDC8-201ENST00000307522 LY6G6DO95868 133 aa11.43□□□□□ -0.58
CCDC8-201ENST00000307522 XCL1P47992 114 aa11.43□□□□□ -0.58
CCDC8-201ENST00000307522 C11orf72Q8NBR9 251 aa11.43□□□□□ -0.58
CCDC8-201ENST00000307522 RMI2Q96E14 147 aa11.43□□□□□ -0.58
CCDC8-201ENST00000307522 TRAV13-2A0A0B4J235 113 aa11.43□□□□□ -0.58
CCDC8-201ENST00000307522 CCL18P55774 89 aa11.43□□□□□ -0.58
CCDC8-201ENST00000307522 NBEAL1Q6ZS30 2694 aa11.43□□□□□ -0.58
CCDC8-201ENST00000307522 DEFB114Q30KQ6 69 aa11.41□□□□□ -0.58
CCDC8-201ENST00000307522 MAP6D1Q9H9H5 199 aa11.41□□□□□ -0.58
CCDC8-201ENST00000307522 IGLV5-45A0A087WSX0 123 aa11.41□□□□□ -0.58
CCDC8-201ENST00000307522 SS18Q15532 418 aa11.41□□□□□ -0.58
CCDC8-201ENST00000307522 C4orf3Q8WVX3 66 aa11.4□□□□□ -0.58
CCDC8-201ENST00000307522 NTM-AS1Q6ZSK4 140 aa11.4□□□□□ -0.58
CCDC8-201ENST00000307522 BRK1Q8WUW1 75 aa11.4□□□□□ -0.58
CCDC8-201ENST00000307522 TRGV1A0A0A0MS02 117 aa11.39□□□□□ -0.59
CCDC8-201ENST00000307522 SCXQ7RTU7 201 aa11.39□□□□□ -0.59
CCDC8-201ENST00000307522 M0R2N4 97 aa11.38□□□□□ -0.59
CCDC8-201ENST00000307522 HAMPP81172 84 aa11.38□□□□□ -0.59
CCDC8-201ENST00000307522 ODF3L2Q3SX64 289 aa11.38□□□□□ -0.59
CCDC8-201ENST00000307522 A8MTW9 85 aa11.37□□□□□ -0.59
CCDC8-201ENST00000307522 TRAV10A0A0B4J240 114 aa11.37□□□□□ -0.59
CCDC8-201ENST00000307522 ORMDL1Q9P0S3 153 aa11.37□□□□□ -0.59
CCDC8-201ENST00000307522 LOC100131303A0A0U1RQF7 123 aa11.37□□□□□ -0.59
CCDC8-201ENST00000307522 MPLKIPQ8TAP9 179 aa11.37□□□□□ -0.59
CCDC8-201ENST00000307522 COPS9Q8WXC6 57 aa11.36□□□□□ -0.59
CCDC8-201ENST00000307522 LYPD5Q6UWN5 251 aa11.36□□□□□ -0.59
CCDC8-201ENST00000307522 STHQ8IWL8 128 aa11.36□□□□□ -0.59
CCDC8-201ENST00000307522 BAHCC1Q9P281 2608 aa11.36□□□□□ -0.59
CCDC8-201ENST00000307522 H7BZZ5 65 aa11.35□□□□□ -0.59
CCDC8-201ENST00000307522 COX7B2Q8TF08 81 aa11.35□□□□□ -0.59
CCDC8-201ENST00000307522 PRO0628Q9UI54 55 aa11.35□□□□□ -0.59
CCDC8-201ENST00000307522 F8WEM9 126 aa11.35□□□□□ -0.59
CCDC8-201ENST00000307522 KRTAP10-3P60369 221 aa11.35□□□□□ -0.59
CCDC8-201ENST00000307522 FP248Q71RG6 208 aaPredicted RBP11.35□□□□□ -0.59
CCDC8-201ENST00000307522 CCKP06307 115 aa11.35□□□□□ -0.59
CCDC8-201ENST00000307522 MRAPQ8TCY5 172 aa11.35□□□□□ -0.59
CCDC8-201ENST00000307522 RBM3P98179 157 aaKnown RBP11.34□□□□□ -0.59
CCDC8-201ENST00000307522 ZNF415Q09FC8 603 aa11.34□□□□□ -0.59
CCDC8-201ENST00000307522 CLPSL2Q6UWE3 100 aa11.34□□□□□ -0.59
CCDC8-201ENST00000307522 CDC42SE2Q9NRR3 84 aa11.33□□□□□ -0.6
CCDC8-201ENST00000307522 UBE2L6O14933 153 aa11.33□□□□□ -0.6
CCDC8-201ENST00000307522 TMEM89A2RUT3 159 aa11.32□□□□□ -0.6
CCDC8-201ENST00000307522 NDUFC2O95298 119 aa11.32□□□□□ -0.6
CCDC8-201ENST00000307522 DEFB4AO15263 64 aa11.31□□□□□ -0.6
CCDC8-201ENST00000307522 OBSCN-AS1Q96MR7 158 aa11.31□□□□□ -0.6
CCDC8-201ENST00000307522 PF4P02776 101 aa11.31□□□□□ -0.6
CCDC8-201ENST00000307522 LINC00482Q8N8I6 264 aa11.3□□□□□ -0.6
CCDC8-201ENST00000307522 H0YGX0 51 aa11.3□□□□□ -0.6
CCDC8-201ENST00000307522 IGLV4-60A0A075B6I1 120 aa11.29□□□□□ -0.6
CCDC8-201ENST00000307522 UBL5Q9BZL1 73 aa11.29□□□□□ -0.6
CCDC8-201ENST00000307522 NOP10Q9NPE3 64 aaKnown RBP11.28□□□□□ -0.6
CCDC8-201ENST00000307522 TMEM86BQ8N661 226 aa11.27□□□□□ -0.61
CCDC8-201ENST00000307522 C16orf95Q9H693 158 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms