RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 C1orf134Q5TEV5 83 aa6.09□□□□□ -1.44
PCDHB1-201ENST00000306549 TRBV30A0A0K0K1B3 111 aa6.08□□□□□ -1.44
PCDHB1-201ENST00000306549 LINC00173Q6ZV60 143 aa6.08□□□□□ -1.44
PCDHB1-201ENST00000306549 RETNQ9HD89 108 aa6.08□□□□□ -1.44
PCDHB1-201ENST00000306549 FRMD6-AS1P0C7T7 363 aa6.08□□□□□ -1.44
PCDHB1-201ENST00000306549 RPL37AP8A6NKH3 93 aa6.08□□□□□ -1.44
PCDHB1-201ENST00000306549 Q6JHZ5 121 aa6.08□□□□□ -1.44
PCDHB1-201ENST00000306549 Q6ZPA2 131 aa6.08□□□□□ -1.44
PCDHB1-201ENST00000306549 ESRGQ1W209 222 aa6.08□□□□□ -1.44
PCDHB1-201ENST00000306549 A0A1W2PPR1 153 aa6.08□□□□□ -1.44
PCDHB1-201ENST00000306549 ZNF73O43830 326 aaPredicted RBP6.07□□□□□ -1.44
PCDHB1-201ENST00000306549 Q6ZQY7 126 aa6.07□□□□□ -1.44
PCDHB1-201ENST00000306549 SLPIP03973 132 aa6.07□□□□□ -1.44
PCDHB1-201ENST00000306549 STAB1Q9NY15 2570 aa6.07□□□□□ -1.44
PCDHB1-201ENST00000306549 M0QY20 66 aa6.07□□□□□ -1.44
PCDHB1-201ENST00000306549 REG3GQ6UW15 175 aa6.07□□□□□ -1.44
PCDHB1-201ENST00000306549 SMR3AQ99954 134 aa6.06□□□□□ -1.44
PCDHB1-201ENST00000306549 OXLD1Q5BKU9 147 aa6.06□□□□□ -1.44
PCDHB1-201ENST00000306549 SPATA3Q8NHX4 192 aa6.06□□□□□ -1.44
PCDHB1-201ENST00000306549 ZNF22P17026 224 aaPredicted RBP6.06□□□□□ -1.44
PCDHB1-201ENST00000306549 C20orf173Q96LM9 149 aa6.06□□□□□ -1.44
PCDHB1-201ENST00000306549 LINC00959A0A1B0GUT2 108 aa6.05□□□□□ -1.44
PCDHB1-201ENST00000306549 Q8IZM0 81 aa6.05□□□□□ -1.44
PCDHB1-201ENST00000306549 LOC100131303A0A0U1RQF7 123 aa6.05□□□□□ -1.44
PCDHB1-201ENST00000306549 RANBP2P49792 3224 aaKnown RBP6.05□□□□□ -1.44
PCDHB1-201ENST00000306549 CHD9Q3L8U1 2897 aa6.05□□□□□ -1.44
PCDHB1-201ENST00000306549 TRBV7-6A0A0J9YX20 115 aa6.05□□□□□ -1.44
PCDHB1-201ENST00000306549 EGFEM1PQ0D2K5 195 aa6.05□□□□□ -1.44
PCDHB1-201ENST00000306549 NDUFV3P56181 108 aaKnown RBP6.05□□□□□ -1.44
PCDHB1-201ENST00000306549 COX8CQ7Z4L0 72 aa6.05□□□□□ -1.44
PCDHB1-201ENST00000306549 TTTY13Q9BZ97 58 aa6.05□□□□□ -1.44
PCDHB1-201ENST00000306549 C1orf229Q6ZS94 237 aaPredicted RBP6.04□□□□□ -1.44
PCDHB1-201ENST00000306549 WFDC10AQ9H1F0 79 aa6.04□□□□□ -1.44
PCDHB1-201ENST00000306549 H3BNG1 76 aa6.04□□□□□ -1.44
PCDHB1-201ENST00000306549 C1orf137Q5JT78 98 aa6.04□□□□□ -1.44
PCDHB1-201ENST00000306549 CSDC2Q9Y534 153 aaKnown RBP6.04□□□□□ -1.44
PCDHB1-201ENST00000306549 IMUPQ9GZP8 106 aa6.04□□□□□ -1.44
PCDHB1-201ENST00000306549 HTTP42858 3142 aa6.04□□□□□ -1.44
PCDHB1-201ENST00000306549 COL6A5A8TX70 2615 aa6.03□□□□□ -1.44
PCDHB1-201ENST00000306549 ODF3L2Q3SX64 289 aa6.03□□□□□ -1.44
PCDHB1-201ENST00000306549 IGSF10Q6WRI0 2623 aa6.03□□□□□ -1.44
PCDHB1-201ENST00000306549 LINC01556Q5JQF7 62 aa6.03□□□□□ -1.44
PCDHB1-201ENST00000306549 ZNF80P51504 273 aaPredicted RBP6.03□□□□□ -1.44
PCDHB1-201ENST00000306549 IGHV6-1A0A0B4J1U7 121 aa6.02□□□□□ -1.45
PCDHB1-201ENST00000306549 LINC01561Q8N1V8 128 aa6.02□□□□□ -1.45
PCDHB1-201ENST00000306549 A0A0C4DFX4 3053 aa6.02□□□□□ -1.45
PCDHB1-201ENST00000306549 C10orf99Q6UWK7 81 aa6.02□□□□□ -1.45
PCDHB1-201ENST00000306549 A0A1B0GUV1 79 aa6.02□□□□□ -1.45
PCDHB1-201ENST00000306549 C2orf48Q96LS8 159 aa6.02□□□□□ -1.45
PCDHB1-201ENST00000306549 TRIAP1O43715 76 aa6.02□□□□□ -1.45
PCDHB1-201ENST00000306549 IGLV2-8P01709 118 aa6.01□□□□□ -1.45
PCDHB1-201ENST00000306549 BEAN1Q3B7T3 259 aa6.01□□□□□ -1.45
PCDHB1-201ENST00000306549 GDF5OSQ5U4N7 250 aa6.01□□□□□ -1.45
PCDHB1-201ENST00000306549 FAM30AQ9NZY2 134 aa6.01□□□□□ -1.45
PCDHB1-201ENST00000306549 CYSRT1A8MQ03 144 aa6.01□□□□□ -1.45
PCDHB1-201ENST00000306549 UNC79Q9P2D8 2635 aa6.01□□□□□ -1.45
PCDHB1-201ENST00000306549 A0A0U1RQV1 116 aa6.01□□□□□ -1.45
PCDHB1-201ENST00000306549 Q6ZS46 218 aa6.01□□□□□ -1.45
PCDHB1-201ENST00000306549 CHD6Q8TD26 2715 aa6.01□□□□□ -1.45
PCDHB1-201ENST00000306549 DSPP15924 2871 aaKnown RBP6□□□□□ -1.45
PCDHB1-201ENST00000306549 FAM229AH3BQW9 127 aa6□□□□□ -1.45
PCDHB1-201ENST00000306549 RNASE3P12724 160 aaKnown RBP6□□□□□ -1.45
PCDHB1-201ENST00000306549 LINC00526Q96FQ7 95 aa6□□□□□ -1.45
PCDHB1-201ENST00000306549 SNURFQ9Y675 71 aa6□□□□□ -1.45
PCDHB1-201ENST00000306549 IGLV2-11P01706 119 aa6□□□□□ -1.45
PCDHB1-201ENST00000306549 C6orf223Q8N319 242 aa5.99□□□□□ -1.45
PCDHB1-201ENST00000306549 RNASE8Q8TDE3 154 aaKnown RBP5.99□□□□□ -1.45
PCDHB1-201ENST00000306549 SMIM11BQ8TCY0 68 aa5.99□□□□□ -1.45
PCDHB1-201ENST00000306549 C18orf65Q6ZTR6 163 aa5.99□□□□□ -1.45
PCDHB1-201ENST00000306549 PRR4Q16378 134 aa5.99□□□□□ -1.45
PCDHB1-201ENST00000306549 LINC00208Q96KT6 92 aa5.98□□□□□ -1.45
PCDHB1-201ENST00000306549 Q9BRP9 147 aa5.98□□□□□ -1.45
PCDHB1-201ENST00000306549 TSHBP01222 138 aa5.98□□□□□ -1.45
PCDHB1-201ENST00000306549 NUPR1O60356 82 aa5.98□□□□□ -1.45
PCDHB1-201ENST00000306549 hDV103S1A0JD37 113 aa5.97□□□□□ -1.45
PCDHB1-201ENST00000306549 SPINK1P00995 79 aa5.97□□□□□ -1.45
PCDHB1-201ENST00000306549 TP73-AS1Q9UF72 201 aa5.97□□□□□ -1.45
PCDHB1-201ENST00000306549 NTM-AS1Q6ZSK4 140 aa5.97□□□□□ -1.45
PCDHB1-201ENST00000306549 MRPS12O15235 138 aaKnown RBP5.97□□□□□ -1.45
PCDHB1-201ENST00000306549 MGAQ8IWI9 3026 aa5.97□□□□□ -1.45
PCDHB1-201ENST00000306549 MAP1AP78559 2803 aaPredicted RBP5.97□□□□□ -1.45
PCDHB1-201ENST00000306549 POLR2KP53803 58 aaKnown RBP5.96□□□□□ -1.45
PCDHB1-201ENST00000306549 CDC42SE2Q9NRR3 84 aa5.96□□□□□ -1.46
PCDHB1-201ENST00000306549 PLA2G2EQ9NZK7 142 aa5.96□□□□□ -1.46
PCDHB1-201ENST00000306549 CRIP1P50238 77 aa5.96□□□□□ -1.46
PCDHB1-201ENST00000306549 EDN2P20800 178 aa5.96□□□□□ -1.46
PCDHB1-201ENST00000306549 NRACQ8N912 160 aa5.96□□□□□ -1.46
PCDHB1-201ENST00000306549 LINC01547P58512 204 aaPredicted RBP5.96□□□□□ -1.46
PCDHB1-201ENST00000306549 KLK9Q2XQG4 91 aa5.96□□□□□ -1.46
PCDHB1-201ENST00000306549 TRAV7A0A075B6U4 112 aa5.95□□□□□ -1.46
PCDHB1-201ENST00000306549 RETNLBQ9BQ08 111 aa5.95□□□□□ -1.46
PCDHB1-201ENST00000306549 CELA1Q9UNI1 258 aa5.94□□□□□ -1.46
PCDHB1-201ENST00000306549 SMIM26A0A096LP01 95 aa5.94□□□□□ -1.46
PCDHB1-201ENST00000306549 PLA2G1BP04054 148 aaKnown RBP5.94□□□□□ -1.46
PCDHB1-201ENST00000306549 Q6ZTC4 211 aa5.94□□□□□ -1.46
PCDHB1-201ENST00000306549 WWC2-AS2Q96NR7 200 aa5.94□□□□□ -1.46
PCDHB1-201ENST00000306549 LAMA2P24043 3122 aaKnown RBP5.94□□□□□ -1.46
PCDHB1-201ENST00000306549 Q6Q795 121 aa5.94□□□□□ -1.46
PCDHB1-201ENST00000306549 UNQ6190/PRO20217Q6UXQ8 127 aa5.94□□□□□ -1.46
PCDHB1-201ENST00000306549 TRBV10-3A0A0K0K1G6 114 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms