RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 Q8N3U1 123 aa5.52□□□□□ -1.53
SF3B3-201ENST00000302516 LIMD2Q9BT23 127 aa5.52□□□□□ -1.53
SF3B3-201ENST00000302516 TSPEAR-AS2P59090 65 aa5.52□□□□□ -1.53
SF3B3-201ENST00000302516 ESRGQ1W209 222 aa5.52□□□□□ -1.53
SF3B3-201ENST00000302516 CELA1Q9UNI1 258 aa5.51□□□□□ -1.53
SF3B3-201ENST00000302516 PRO0628Q9UI54 55 aa5.51□□□□□ -1.53
SF3B3-201ENST00000302516 TMEM254Q8TBM7 123 aa5.51□□□□□ -1.53
SF3B3-201ENST00000302516 TRBV7-6A0A0J9YX20 115 aa5.51□□□□□ -1.53
SF3B3-201ENST00000302516 HCG22E2RYF7 251 aa5.51□□□□□ -1.53
SF3B3-201ENST00000302516 A0A0J9YWU9 116 aa5.5□□□□□ -1.53
SF3B3-201ENST00000302516 ADAMTSL4-AS1Q5T5F5 129 aa5.5□□□□□ -1.53
SF3B3-201ENST00000302516 RPS28P62857 69 aaKnown RBP5.5□□□□□ -1.53
SF3B3-201ENST00000302516 A0A096LNI7 61 aa5.5□□□□□ -1.53
SF3B3-201ENST00000302516 LOC100131303A0A0U1RQF7 123 aa5.5□□□□□ -1.53
SF3B3-201ENST00000302516 RPL37AP8A6NKH3 93 aa5.5□□□□□ -1.53
SF3B3-201ENST00000302516 FLNBO75369 2602 aaKnown RBP5.49□□□□□ -1.53
SF3B3-201ENST00000302516 LINC01547P58512 204 aaPredicted RBP5.49□□□□□ -1.53
SF3B3-201ENST00000302516 A0A096LNJ9 63 aa5.49□□□□□ -1.53
SF3B3-201ENST00000302516 ZNF843Q8N446 348 aa5.49□□□□□ -1.53
SF3B3-201ENST00000302516 COX6A2Q02221 97 aa5.49□□□□□ -1.53
SF3B3-201ENST00000302516 CEP295Q9C0D2 2601 aa5.49□□□□□ -1.53
SF3B3-201ENST00000302516 CRYGAP11844 174 aa5.49□□□□□ -1.53
SF3B3-201ENST00000302516 LINC00575Q6W349 94 aa5.49□□□□□ -1.53
SF3B3-201ENST00000302516 C19orf84I3L1E1 186 aa5.48□□□□□ -1.53
SF3B3-201ENST00000302516 LINC00208Q96KT6 92 aa5.48□□□□□ -1.53
SF3B3-201ENST00000302516 IGF2RP11717 2491 aa5.48□□□□□ -1.53
SF3B3-201ENST00000302516 Q6ZVQ6 151 aa5.48□□□□□ -1.53
SF3B3-201ENST00000302516 IGLV9-49A0A0B4J1Y8 123 aa5.48□□□□□ -1.53
SF3B3-201ENST00000302516 NUPR2A6NF83 97 aa5.48□□□□□ -1.53
SF3B3-201ENST00000302516 H0Y9P7 68 aa5.48□□□□□ -1.53
SF3B3-201ENST00000302516 PRR4Q16378 134 aa5.48□□□□□ -1.53
SF3B3-201ENST00000302516 CDIP1Q9H305 208 aa5.48□□□□□ -1.53
SF3B3-201ENST00000302516 SPINK6Q6UWN8 80 aa5.48□□□□□ -1.53
SF3B3-201ENST00000302516 LRCOL1A6NCL2 159 aa5.48□□□□□ -1.53
SF3B3-201ENST00000302516 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-201ENST00000302516 TP53AIP1Q9HCN2 124 aa5.47□□□□□ -1.53
SF3B3-201ENST00000302516 EPG5Q9HCE0 2579 aa5.47□□□□□ -1.53
SF3B3-201ENST00000302516 WISP2O76076 250 aa5.47□□□□□ -1.53
SF3B3-201ENST00000302516 LINC01006Q8NI28 216 aa5.47□□□□□ -1.53
SF3B3-201ENST00000302516 C10orf99Q6UWK7 81 aa5.47□□□□□ -1.53
SF3B3-201ENST00000302516 UNQ6190/PRO20217Q6UXQ8 127 aa5.47□□□□□ -1.53
SF3B3-201ENST00000302516 IGLV5-39A0A0G2JS06 123 aa5.47□□□□□ -1.53
SF3B3-201ENST00000302516 A0A087WVE0 104 aa5.46□□□□□ -1.53
SF3B3-201ENST00000302516 LINC00482Q8N8I6 264 aa5.46□□□□□ -1.53
SF3B3-201ENST00000302516 PPDPFQ9H3Y8 114 aa5.46□□□□□ -1.53
SF3B3-201ENST00000302516 C10orf142B7Z368 130 aa5.46□□□□□ -1.54
SF3B3-201ENST00000302516 Q9BRP9 147 aa5.46□□□□□ -1.54
SF3B3-201ENST00000302516 IGLV1-51P01701 117 aa5.46□□□□□ -1.54
SF3B3-201ENST00000302516 FHL2Q14192 279 aa5.46□□□□□ -1.54
SF3B3-201ENST00000302516 SOSTDC1Q6X4U4 206 aa5.45□□□□□ -1.54
SF3B3-201ENST00000302516 ODF3L2Q3SX64 289 aa5.45□□□□□ -1.54
SF3B3-201ENST00000302516 FN1P02751 2386 aaKnown RBP5.45□□□□□ -1.54
SF3B3-201ENST00000302516 H3BPC8 53 aa5.45□□□□□ -1.54
SF3B3-201ENST00000302516 COL4A2P08572 1712 aa5.44□□□□□ -1.54
SF3B3-201ENST00000302516 ABCA12Q86UK0 2595 aa5.44□□□□□ -1.54
SF3B3-201ENST00000302516 JMJD1CQ15652 2540 aa5.44□□□□□ -1.54
SF3B3-201ENST00000302516 PSPHP1O15172 72 aa5.44□□□□□ -1.54
SF3B3-201ENST00000302516 SETD2Q9BYW2 2564 aaPredicted RBP5.44□□□□□ -1.54
SF3B3-201ENST00000302516 IGHV6-1A0A0B4J1U7 121 aa5.44□□□□□ -1.54
SF3B3-201ENST00000302516 Q8N2B8 174 aa5.44□□□□□ -1.54
SF3B3-201ENST00000302516 C16orf95Q9H693 158 aa5.44□□□□□ -1.54
SF3B3-201ENST00000302516 LINC00846Q9NV44 126 aa5.44□□□□□ -1.54
SF3B3-201ENST00000302516 LOC110117498A0A087WWA1 95 aa5.44□□□□□ -1.54
SF3B3-201ENST00000302516 C9orf116Q5BN46 136 aaPredicted RBP5.44□□□□□ -1.54
SF3B3-201ENST00000302516 LINC00337Q8N6G1 96 aa5.43□□□□□ -1.54
SF3B3-201ENST00000302516 INAFM1C9JVW0 142 aa5.43□□□□□ -1.54
SF3B3-201ENST00000302516 IGLV5-45A0A087WSX0 123 aa5.43□□□□□ -1.54
SF3B3-201ENST00000302516 POLQO75417 2590 aa5.43□□□□□ -1.54
SF3B3-201ENST00000302516 C18orf65Q6ZTR6 163 aa5.43□□□□□ -1.54
SF3B3-201ENST00000302516 IGLV4-60A0A075B6I1 120 aa5.42□□□□□ -1.54
SF3B3-201ENST00000302516 NANOS2P60321 138 aaKnown RBP5.42□□□□□ -1.54
SF3B3-201ENST00000302516 IGHV4-30-4P0DP06 118 aa5.42□□□□□ -1.54
SF3B3-201ENST00000302516 LY6G6DO95868 133 aa5.41□□□□□ -1.54
SF3B3-201ENST00000302516 C1orf64Q8NEQ6 169 aa5.41□□□□□ -1.54
SF3B3-201ENST00000302516 PRR3P79522 188 aaKnown RBP5.4□□□□□ -1.54
SF3B3-201ENST00000302516 RETNQ9HD89 108 aa5.4□□□□□ -1.55
SF3B3-201ENST00000302516 PRO0461Q9UI25 63 aa5.4□□□□□ -1.55
SF3B3-201ENST00000302516 FAM19A4Q96LR4 140 aa5.4□□□□□ -1.55
SF3B3-201ENST00000302516 ERC2-IT1O76042 136 aa5.39□□□□□ -1.55
SF3B3-201ENST00000302516 CIRBP-AS1Q8TBR5 109 aa5.39□□□□□ -1.55
SF3B3-201ENST00000302516 SBSPONQ8IVN8 264 aa5.39□□□□□ -1.55
SF3B3-201ENST00000302516 C6orf223Q8N319 242 aa5.39□□□□□ -1.55
SF3B3-201ENST00000302516 KIF25-AS1Q9Y6Z4 181 aa5.39□□□□□ -1.55
SF3B3-201ENST00000302516 A0A087WSZ3 146 aa5.39□□□□□ -1.55
SF3B3-201ENST00000302516 PRM2P04554 102 aa5.39□□□□□ -1.55
SF3B3-201ENST00000302516 C11orf72Q8NBR9 251 aa5.38□□□□□ -1.55
SF3B3-201ENST00000302516 ACYP2P14621 99 aa5.38□□□□□ -1.55
SF3B3-201ENST00000302516 IGLV5-52A0A0A0MRZ9 124 aa5.38□□□□□ -1.55
SF3B3-201ENST00000302516 Q6ZTC4 211 aa5.37□□□□□ -1.55
SF3B3-201ENST00000302516 Q6ZSN1 163 aa5.37□□□□□ -1.55
SF3B3-201ENST00000302516 LYPD5Q6UWN5 251 aa5.37□□□□□ -1.55
SF3B3-201ENST00000302516 SPATA3Q8NHX4 192 aa5.37□□□□□ -1.55
SF3B3-201ENST00000302516 SMIM29Q86T20 159 aa5.36□□□□□ -1.55
SF3B3-201ENST00000302516 MAST4O15021 2626 aa5.36□□□□□ -1.55
SF3B3-201ENST00000302516 ELOF1P60002 83 aaKnown RBP5.36□□□□□ -1.55
SF3B3-201ENST00000302516 Q6ZQT0 140 aa5.36□□□□□ -1.55
SF3B3-201ENST00000302516 IGHV3OR16-9A0A0B4J2B5 98 aa5.36□□□□□ -1.55
SF3B3-201ENST00000302516 PCOTHQ58A44 107 aa5.36□□□□□ -1.55
SF3B3-201ENST00000302516 PRO3102Q9H379 93 aa5.35□□□□□ -1.55
SF3B3-201ENST00000302516 A0A1B0GU69 56 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms