RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 GAGE2EQ4V326 116 aa9.45□□□□□ -0.9
TTC39B-201ENST00000297615 C6orf226Q5I0X4 101 aa9.45□□□□□ -0.9
TTC39B-201ENST00000297615 IL17DQ8TAD2 202 aa9.45□□□□□ -0.9
TTC39B-201ENST00000297615 GAGE2DQ9UEU5 116 aa9.45□□□□□ -0.9
TTC39B-201ENST00000297615 IFITM1P13164 125 aa9.45□□□□□ -0.9
TTC39B-201ENST00000297615 X6R8D5 127 aa9.45□□□□□ -0.9
TTC39B-201ENST00000297615 DAD1P61803 113 aa9.44□□□□□ -0.9
TTC39B-201ENST00000297615 MRAPQ8TCY5 172 aa9.44□□□□□ -0.9
TTC39B-201ENST00000297615 SND1-IT1Q9HBX3 110 aa9.44□□□□□ -0.9
TTC39B-201ENST00000297615 FAM218AQ96MZ4 157 aa9.44□□□□□ -0.9
TTC39B-201ENST00000297615 CRPP02741 224 aa9.43□□□□□ -0.9
TTC39B-201ENST00000297615 SCGB1A1P11684 91 aa9.43□□□□□ -0.9
TTC39B-201ENST00000297615 LINC00337Q8N6G1 96 aa9.42□□□□□ -0.9
TTC39B-201ENST00000297615 C3orf56Q8N813 242 aa9.42□□□□□ -0.9
TTC39B-201ENST00000297615 TRBV6-4A0A1B0GX49 114 aa9.41□□□□□ -0.9
TTC39B-201ENST00000297615 IGHV4-30-4P0DP06 118 aa9.41□□□□□ -0.9
TTC39B-201ENST00000297615 SLPIP03973 132 aa9.41□□□□□ -0.9
TTC39B-201ENST00000297615 BAALC-AS2P0C853 105 aa9.41□□□□□ -0.9
TTC39B-201ENST00000297615 CLUHP3Q96NS8 147 aa9.4□□□□□ -0.9
TTC39B-201ENST00000297615 STAB2Q8WWQ8 2551 aa9.4□□□□□ -0.9
TTC39B-201ENST00000297615 TIMM17BO60830 172 aa9.4□□□□□ -0.9
TTC39B-201ENST00000297615 CYSRT1A8MQ03 144 aa9.4□□□□□ -0.91
TTC39B-201ENST00000297615 COX7A2LO14548 114 aa9.4□□□□□ -0.91
TTC39B-201ENST00000297615 KLK12Q9UKR0 248 aa9.39□□□□□ -0.91
TTC39B-201ENST00000297615 CSDC2Q9Y534 153 aaKnown RBP9.39□□□□□ -0.91
TTC39B-201ENST00000297615 CCL18P55774 89 aa9.38□□□□□ -0.91
TTC39B-201ENST00000297615 GAGE2AQ6NT46 116 aa9.38□□□□□ -0.91
TTC39B-201ENST00000297615 C9orf66Q5T8R8 295 aa9.38□□□□□ -0.91
TTC39B-201ENST00000297615 ANK2Q01484 3957 aa9.38□□□□□ -0.91
TTC39B-201ENST00000297615 LINC00959A0A1B0GUT2 108 aa9.37□□□□□ -0.91
TTC39B-201ENST00000297615 B5MCH6 92 aa9.37□□□□□ -0.91
TTC39B-201ENST00000297615 H3BT86 120 aa9.37□□□□□ -0.91
TTC39B-201ENST00000297615 C6orf223Q8N319 242 aa9.37□□□□□ -0.91
TTC39B-201ENST00000297615 DNAL4O96015 105 aa9.37□□□□□ -0.91
TTC39B-201ENST00000297615 A0A087WYN8 130 aa9.37□□□□□ -0.91
TTC39B-201ENST00000297615 IGHV3OR16-9A0A0B4J2B5 98 aa9.37□□□□□ -0.91
TTC39B-201ENST00000297615 PRO0255Q9UI72 69 aa9.37□□□□□ -0.91
TTC39B-201ENST00000297615 IGKV2-28A0A075B6P5 120 aa9.36□□□□□ -0.91
TTC39B-201ENST00000297615 IGKV2D-28P01615 120 aa9.36□□□□□ -0.91
TTC39B-201ENST00000297615 HERV-K104P63124 156 aa9.36□□□□□ -0.91
TTC39B-201ENST00000297615 SMIM11BQ8TCY0 68 aa9.36□□□□□ -0.91
TTC39B-201ENST00000297615 OVOL2Q9BRP0 275 aa9.36□□□□□ -0.91
TTC39B-201ENST00000297615 CMC4P56277 68 aaPredicted RBP9.35□□□□□ -0.91
TTC39B-201ENST00000297615 LECT2O14960 151 aa9.35□□□□□ -0.91
TTC39B-201ENST00000297615 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
TTC39B-201ENST00000297615 MALP21145 153 aa9.35□□□□□ -0.91
TTC39B-201ENST00000297615 SS18Q15532 418 aa9.34□□□□□ -0.91
TTC39B-201ENST00000297615 COPS9Q8WXC6 57 aa9.34□□□□□ -0.91
TTC39B-201ENST00000297615 DEFB121Q5J5C9 76 aa9.34□□□□□ -0.91
TTC39B-201ENST00000297615 C9orf129Q5T035 196 aaKnown RBP9.34□□□□□ -0.91
TTC39B-201ENST00000297615 SHISA2Q6UWI4 295 aa9.33□□□□□ -0.92
TTC39B-201ENST00000297615 NDUFV3P56181 108 aaKnown RBP9.33□□□□□ -0.92
TTC39B-201ENST00000297615 CITED1Q99966 193 aa9.33□□□□□ -0.92
TTC39B-201ENST00000297615 C14orf132Q9NPU4 83 aa9.33□□□□□ -0.92
TTC39B-201ENST00000297615 TRAV13-2A0A0B4J235 113 aa9.32□□□□□ -0.92
TTC39B-201ENST00000297615 CCDC179H3BU77 68 aa9.32□□□□□ -0.92
TTC39B-201ENST00000297615 KRTAP10-11P60412 298 aa9.32□□□□□ -0.92
TTC39B-201ENST00000297615 A0A087WZ39 114 aa9.31□□□□□ -0.92
TTC39B-201ENST00000297615 KRTAP24-1Q3LI83 254 aa9.31□□□□□ -0.92
TTC39B-201ENST00000297615 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
TTC39B-201ENST00000297615 NCR3O14931 201 aa9.3□□□□□ -0.92
TTC39B-201ENST00000297615 CHCHD10Q8WYQ3 142 aaPredicted RBP9.3□□□□□ -0.92
TTC39B-201ENST00000297615 REG3AQ06141 175 aa9.3□□□□□ -0.92
TTC39B-201ENST00000297615 CFAP161Q6P656 301 aa9.3□□□□□ -0.92
TTC39B-201ENST00000297615 Q6ZTC4 211 aa9.3□□□□□ -0.92
TTC39B-201ENST00000297615 NANOS2P60321 138 aaKnown RBP9.3□□□□□ -0.92
TTC39B-201ENST00000297615 XAGE1AQ9HD64 81 aa9.3□□□□□ -0.92
TTC39B-201ENST00000297615 NHLRC4P0CG21 123 aaPredicted RBP9.29□□□□□ -0.92
TTC39B-201ENST00000297615 C10orf25Q5T742 122 aa9.29□□□□□ -0.92
TTC39B-201ENST00000297615 APOC4P55056 127 aa9.29□□□□□ -0.92
TTC39B-201ENST00000297615 SMCR5Q8TEV8 140 aa9.29□□□□□ -0.92
TTC39B-201ENST00000297615 UNQ6190/PRO20217Q6UXQ8 127 aa9.28□□□□□ -0.92
TTC39B-201ENST00000297615 SPART-AS1P0CW21 52 aa9.28□□□□□ -0.92
TTC39B-201ENST00000297615 FAM236AA0A1B0GUQ0 79 aa9.27□□□□□ -0.93
TTC39B-201ENST00000297615 FAM236BA0A1B0GV22 79 aa9.27□□□□□ -0.93
TTC39B-201ENST00000297615 M0QXV9 152 aa9.27□□□□□ -0.93
TTC39B-201ENST00000297615 FAM19A3Q7Z5A8 133 aa9.27□□□□□ -0.93
TTC39B-201ENST00000297615 WFDC10BQ8IUB3 73 aa9.27□□□□□ -0.93
TTC39B-201ENST00000297615 Q8NAQ8 132 aa9.27□□□□□ -0.93
TTC39B-201ENST00000297615 IBA57-AS1B1ANH7 110 aa9.26□□□□□ -0.93
TTC39B-201ENST00000297615 KIR2DL5BQ8NHK3 375 aa9.26□□□□□ -0.93
TTC39B-201ENST00000297615 IGKV3D-7A0A0C4DH55 119 aa9.26□□□□□ -0.93
TTC39B-201ENST00000297615 A0A0J9YWU9 116 aa9.25□□□□□ -0.93
TTC39B-201ENST00000297615 TRACP01848 142 aa9.25□□□□□ -0.93
TTC39B-201ENST00000297615 RPL28P46779 137 aaKnown RBP9.25□□□□□ -0.93
TTC39B-201ENST00000297615 C22orf24Q9Y442 160 aa9.24□□□□□ -0.93
TTC39B-201ENST00000297615 SDIM1Q6ZPB5 146 aa9.24□□□□□ -0.93
TTC39B-201ENST00000297615 S100A7L2Q5SY68 101 aa9.22□□□□□ -0.93
TTC39B-201ENST00000297615 KPRPQ5T749 579 aaPredicted RBP9.21□□□□□ -0.93
TTC39B-201ENST00000297615 Q8NDZ9 215 aa9.21□□□□□ -0.93
TTC39B-201ENST00000297615 MRPL23Q16540 153 aaKnown RBP9.21□□□□□ -0.94
TTC39B-201ENST00000297615 LYRM9A8MSI8 78 aa9.2□□□□□ -0.94
TTC39B-201ENST00000297615 RPL18AQ02543 176 aaKnown RBP9.2□□□□□ -0.94
TTC39B-201ENST00000297615 C6orf99Q4VX62 202 aa9.2□□□□□ -0.94
TTC39B-201ENST00000297615 SPAG11BQ08648 103 aa9.19□□□□□ -0.94
TTC39B-201ENST00000297615 CD164L2Q6UWJ8 174 aa9.19□□□□□ -0.94
TTC39B-201ENST00000297615 Q8IZM0 81 aa9.19□□□□□ -0.94
TTC39B-201ENST00000297615 A0A087WVE0 104 aa9.18□□□□□ -0.94
TTC39B-201ENST00000297615 A0A1B0GUV1 79 aa9.18□□□□□ -0.94
TTC39B-201ENST00000297615 INAFM2P0DMQ5 153 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms