RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 CCKP06307 115 aa13.36□□□□□ -0.27
TRA2A-201ENST00000297071 NBPF19A0A087WUL8 3843 aa13.36□□□□□ -0.27
TRA2A-201ENST00000297071 C9orf129Q5T035 196 aaKnown RBP13.36□□□□□ -0.27
TRA2A-201ENST00000297071 SERP2Q8N6R1 65 aa13.36□□□□□ -0.27
TRA2A-201ENST00000297071 J3KT08 172 aa13.35□□□□□ -0.27
TRA2A-201ENST00000297071 DEFB113Q30KQ7 82 aa13.35□□□□□ -0.27
TRA2A-201ENST00000297071 C19orf73Q9NVV2 129 aa13.35□□□□□ -0.27
TRA2A-201ENST00000297071 LINC00612Q8N6U2 182 aa13.34□□□□□ -0.27
TRA2A-201ENST00000297071 KIR2DL5BQ8NHK3 375 aa13.34□□□□□ -0.27
TRA2A-201ENST00000297071 CRYBG3Q68DQ2 2970 aa13.34□□□□□ -0.27
TRA2A-201ENST00000297071 C3orf56Q8N813 242 aa13.34□□□□□ -0.27
TRA2A-201ENST00000297071 COX17Q14061 63 aa13.33□□□□□ -0.28
TRA2A-201ENST00000297071 SS18Q15532 418 aa13.33□□□□□ -0.28
TRA2A-201ENST00000297071 C6orf226Q5I0X4 101 aa13.33□□□□□ -0.28
TRA2A-201ENST00000297071 IGLV1-51P01701 117 aa13.32□□□□□ -0.28
TRA2A-201ENST00000297071 PFN2P35080 140 aa13.32□□□□□ -0.28
TRA2A-201ENST00000297071 CFAP161Q6P656 301 aa13.32□□□□□ -0.28
TRA2A-201ENST00000297071 LYPD5Q6UWN5 251 aa13.32□□□□□ -0.28
TRA2A-201ENST00000297071 OR13C6PQ8NH95 151 aa13.32□□□□□ -0.28
TRA2A-201ENST00000297071 TMEM256-PLSCR3K7ERE1 68 aa13.31□□□□□ -0.28
TRA2A-201ENST00000297071 TMEM258P61165 79 aa13.31□□□□□ -0.28
TRA2A-201ENST00000297071 TRBV10-3A0A0K0K1G6 114 aa13.3□□□□□ -0.28
TRA2A-201ENST00000297071 UPK3BQ9BT76 320 aa13.3□□□□□ -0.28
TRA2A-201ENST00000297071 NCR3O14931 201 aa13.29□□□□□ -0.28
TRA2A-201ENST00000297071 MUC7Q8TAX7 377 aa13.29□□□□□ -0.28
TRA2A-201ENST00000297071 ITPR2Q14571 2701 aa13.29□□□□□ -0.28
TRA2A-201ENST00000297071 IGKV3OR2-268A0A0C4DH90 116 aa13.29□□□□□ -0.28
TRA2A-201ENST00000297071 DNAJC9-AS1A6NH13 148 aa13.29□□□□□ -0.28
TRA2A-201ENST00000297071 C16orf95Q9H693 158 aa13.29□□□□□ -0.28
TRA2A-201ENST00000297071 CELSR2Q9HCU4 2923 aa13.28□□□□□ -0.28
TRA2A-201ENST00000297071 IGKV3D-7A0A0C4DH55 119 aa13.28□□□□□ -0.28
TRA2A-201ENST00000297071 Q8N814 137 aa13.28□□□□□ -0.28
TRA2A-201ENST00000297071 USP17L23D6RBM5 183 aa13.27□□□□□ -0.28
TRA2A-201ENST00000297071 NANOS2P60321 138 aaKnown RBP13.27□□□□□ -0.28
TRA2A-201ENST00000297071 IGHV4-28A0A0C4DH34 117 aa13.27□□□□□ -0.29
TRA2A-201ENST00000297071 BCE1O60756 84 aa13.25□□□□□ -0.29
TRA2A-201ENST00000297071 UTP20O75691 2785 aaKnown RBP13.25□□□□□ -0.29
TRA2A-201ENST00000297071 hADV29S1A0JD25 119 aa13.25□□□□□ -0.29
TRA2A-201ENST00000297071 RPL35AP18077 110 aaKnown RBP13.25□□□□□ -0.29
TRA2A-201ENST00000297071 KRTAP1-3Q8IUG1 177 aa13.24□□□□□ -0.29
TRA2A-201ENST00000297071 POLQO75417 2590 aa13.24□□□□□ -0.29
TRA2A-201ENST00000297071 MXRA5Q9NR99 2828 aa13.23□□□□□ -0.29
TRA2A-201ENST00000297071 SLPIP03973 132 aa13.23□□□□□ -0.29
TRA2A-201ENST00000297071 H3BQ85 93 aa13.23□□□□□ -0.29
TRA2A-201ENST00000297071 KIAA0087Q14695 138 aa13.23□□□□□ -0.29
TRA2A-201ENST00000297071 SETD2Q9BYW2 2564 aaPredicted RBP13.22□□□□□ -0.29
TRA2A-201ENST00000297071 NDUFC2-KCTD14E9PQ53 114 aa13.22□□□□□ -0.29
TRA2A-201ENST00000297071 CD164L2Q6UWJ8 174 aa13.21□□□□□ -0.29
TRA2A-201ENST00000297071 SMIM9A6NGZ8 99 aa13.2□□□□□ -0.3
TRA2A-201ENST00000297071 GYPEP15421 78 aa13.2□□□□□ -0.3
TRA2A-201ENST00000297071 XCL1P47992 114 aa13.2□□□□□ -0.3
TRA2A-201ENST00000297071 KRTAP10-9P60411 292 aa13.19□□□□□ -0.3
TRA2A-201ENST00000297071 WFDC10AQ9H1F0 79 aa13.19□□□□□ -0.3
TRA2A-201ENST00000297071 PRO0255Q9UI72 69 aa13.19□□□□□ -0.3
TRA2A-201ENST00000297071 A0A087WVE0 104 aa13.18□□□□□ -0.3
TRA2A-201ENST00000297071 ESM1Q9NQ30 184 aa13.18□□□□□ -0.3
TRA2A-201ENST00000297071 LOC110117498A0A087WWA1 95 aa13.17□□□□□ -0.3
TRA2A-201ENST00000297071 LINC01006Q8NI28 216 aa13.17□□□□□ -0.3
TRA2A-201ENST00000297071 NF1P21359 2839 aa13.17□□□□□ -0.3
TRA2A-201ENST00000297071 RNASE1P07998 156 aaKnown RBP13.16□□□□□ -0.3
TRA2A-201ENST00000297071 DPH3Q96FX2 82 aa13.16□□□□□ -0.3
TRA2A-201ENST00000297071 UBL5Q9BZL1 73 aa13.16□□□□□ -0.3
TRA2A-201ENST00000297071 LINC00575Q6W349 94 aa13.16□□□□□ -0.3
TRA2A-201ENST00000297071 FAM19A5Q7Z5A7 132 aaPredicted RBP13.16□□□□□ -0.3
TRA2A-201ENST00000297071 ZANQ9Y493 2812 aa13.15□□□□□ -0.3
TRA2A-201ENST00000297071 LOC107984640A0A0U1RRK4 108 aa13.15□□□□□ -0.3
TRA2A-201ENST00000297071 C6orf223Q8N319 242 aa13.14□□□□□ -0.31
TRA2A-201ENST00000297071 C11orf68Q9H3H3 251 aaKnown RBP13.14□□□□□ -0.31
TRA2A-201ENST00000297071 WNK1Q9H4A3 2382 aa13.13□□□□□ -0.31
TRA2A-201ENST00000297071 C5orf47Q569G3 176 aa13.13□□□□□ -0.31
TRA2A-201ENST00000297071 CYSTM1Q9H1C7 97 aa13.13□□□□□ -0.31
TRA2A-201ENST00000297071 F8P00451 2351 aa13.13□□□□□ -0.31
TRA2A-201ENST00000297071 ZNF561-AS1K7EIQ3 104 aa13.13□□□□□ -0.31
TRA2A-201ENST00000297071 PDE6GP18545 87 aa13.13□□□□□ -0.31
TRA2A-201ENST00000297071 NOTCH3Q9UM47 2321 aa13.12□□□□□ -0.31
TRA2A-201ENST00000297071 LYRM9A8MSI8 78 aa13.12□□□□□ -0.31
TRA2A-201ENST00000297071 DEFB130BP0DP73 79 aa13.11□□□□□ -0.31
TRA2A-201ENST00000297071 DEFB130AP0DP74 79 aa13.11□□□□□ -0.31
TRA2A-201ENST00000297071 Q6ZQT0 140 aa13.11□□□□□ -0.31
TRA2A-201ENST00000297071 OTOGQ6ZRI0 2925 aa13.11□□□□□ -0.31
TRA2A-201ENST00000297071 GHRHP01286 108 aa13.11□□□□□ -0.31
TRA2A-201ENST00000297071 CHCHD10Q8WYQ3 142 aaPredicted RBP13.11□□□□□ -0.31
TRA2A-201ENST00000297071 MAP1AP78559 2803 aaPredicted RBP13.1□□□□□ -0.31
TRA2A-201ENST00000297071 AKAP9Q99996 3911 aa13.1□□□□□ -0.31
TRA2A-201ENST00000297071 C6orf99Q4VX62 202 aa13.1□□□□□ -0.31
TRA2A-201ENST00000297071 X6R8D5 127 aa13.1□□□□□ -0.31
TRA2A-201ENST00000297071 RBM3P98179 157 aaKnown RBP13.09□□□□□ -0.31
TRA2A-201ENST00000297071 A0A0J9YWU9 116 aa13.08□□□□□ -0.32
TRA2A-201ENST00000297071 IGHV4-30-4P0DP06 118 aa13.08□□□□□ -0.32
TRA2A-201ENST00000297071 PRR3P79522 188 aaKnown RBP13.08□□□□□ -0.32
TRA2A-201ENST00000297071 C9orf66Q5T8R8 295 aa13.08□□□□□ -0.32
TRA2A-201ENST00000297071 DNHD1Q96M86 4753 aa13.07□□□□□ -0.32
TRA2A-201ENST00000297071 LINC00269Q8N2A0 174 aa13.07□□□□□ -0.32
TRA2A-201ENST00000297071 IGLV6-57P01721 117 aa13.06□□□□□ -0.32
TRA2A-201ENST00000297071 REG3AQ06141 175 aa13.06□□□□□ -0.32
TRA2A-201ENST00000297071 CENPEQ02224 2701 aa13.05□□□□□ -0.32
TRA2A-201ENST00000297071 GVQW2A0A096LPI5 108 aaPredicted RBP13.05□□□□□ -0.32
TRA2A-201ENST00000297071 HILS1P60008 231 aa13.05□□□□□ -0.32
TRA2A-201ENST00000297071 ENHOQ6UWT2 76 aa13.05□□□□□ -0.32
TRA2A-201ENST00000297071 TRAV7A0A075B6U4 112 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 434.9 ms