RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 IGIPA6NJ69 53 aa8.16□□□□□ -1.1
HMGB2-201ENST00000296503 M0QY20 66 aa8.16□□□□□ -1.1
HMGB2-201ENST00000296503 SNCGO76070 127 aa8.16□□□□□ -1.1
HMGB2-201ENST00000296503 IFITM1P13164 125 aa8.16□□□□□ -1.1
HMGB2-201ENST00000296503 DNAJC30Q96LL9 226 aa8.16□□□□□ -1.1
HMGB2-201ENST00000296503 TRAV26-2A0A0B4J265 109 aa8.15□□□□□ -1.1
HMGB2-201ENST00000296503 FAM240AA0A1B0GVK7 77 aa8.15□□□□□ -1.1
HMGB2-201ENST00000296503 IBA57-AS1B1ANH7 110 aa8.15□□□□□ -1.11
HMGB2-201ENST00000296503 ATXN8Q156A1 80 aa8.15□□□□□ -1.11
HMGB2-201ENST00000296503 DAZ4Q86SG3 579 aaKnown RBP8.15□□□□□ -1.11
HMGB2-201ENST00000296503 AMELXQ99217 191 aa8.15□□□□□ -1.11
HMGB2-201ENST00000296503 Q9HAA7 133 aa8.15□□□□□ -1.11
HMGB2-201ENST00000296503 DAZ3Q9NR90 486 aaKnown RBP8.15□□□□□ -1.11
HMGB2-201ENST00000296503 FAT2Q9NYQ8 4349 aa8.14□□□□□ -1.11
HMGB2-201ENST00000296503 TRBV6-8A0A0A6YYG3 113 aa8.14□□□□□ -1.11
HMGB2-201ENST00000296503 TRBV30A0A0K0K1B3 111 aa8.14□□□□□ -1.11
HMGB2-201ENST00000296503 Q6ZRN7 208 aaPredicted RBP8.14□□□□□ -1.11
HMGB2-201ENST00000296503 Q8N3U1 123 aa8.14□□□□□ -1.11
HMGB2-201ENST00000296503 SS18L2Q9UHA2 77 aa8.14□□□□□ -1.11
HMGB2-201ENST00000296503 TRBV10-2A0A0K0K1G8 114 aa8.13□□□□□ -1.11
HMGB2-201ENST00000296503 POLR2KP53803 58 aaKnown RBP8.13□□□□□ -1.11
HMGB2-201ENST00000296503 TRBV6-5A0A0K0K1A5 114 aa8.13□□□□□ -1.11
HMGB2-201ENST00000296503 SDHAF1A6NFY7 115 aa8.13□□□□□ -1.11
HMGB2-201ENST00000296503 B5MCH6 92 aa8.13□□□□□ -1.11
HMGB2-201ENST00000296503 VCYO14598 125 aa8.13□□□□□ -1.11
HMGB2-201ENST00000296503 PSCAO43653 123 aa8.13□□□□□ -1.11
HMGB2-201ENST00000296503 CHCHD5Q9BSY4 110 aa8.13□□□□□ -1.11
HMGB2-201ENST00000296503 LEPROTO15243 131 aa8.12□□□□□ -1.11
HMGB2-201ENST00000296503 TSHBP01222 138 aa8.12□□□□□ -1.11
HMGB2-201ENST00000296503 H3BT86 120 aa8.11□□□□□ -1.11
HMGB2-201ENST00000296503 J3QQQ9 107 aa8.11□□□□□ -1.11
HMGB2-201ENST00000296503 LINC01620Q4KN68 170 aa8.11□□□□□ -1.11
HMGB2-201ENST00000296503 TMEM126AQ9H061 195 aa8.11□□□□□ -1.11
HMGB2-201ENST00000296503 C9JAW5 83 aa8.11□□□□□ -1.11
HMGB2-201ENST00000296503 NTM-AS1Q6ZSK4 140 aa8.11□□□□□ -1.11
HMGB2-201ENST00000296503 KIR2DL4Q99706 377 aa8.11□□□□□ -1.11
HMGB2-201ENST00000296503 IMUPQ9GZP8 106 aa8.11□□□□□ -1.11
HMGB2-201ENST00000296503 KLK12Q9UKR0 248 aa8.11□□□□□ -1.11
HMGB2-201ENST00000296503 BIRC6Q9NR09 4857 aa8.1□□□□□ -1.11
HMGB2-201ENST00000296503 TRAV8-3A0A0A6YYJ7 113 aa8.1□□□□□ -1.11
HMGB2-201ENST00000296503 TRBV27A0A0K0K1C4 114 aa8.1□□□□□ -1.11
HMGB2-201ENST00000296503 LGALS3P17931 250 aaKnown RBP8.1□□□□□ -1.11
HMGB2-201ENST00000296503 DEFB104AQ8WTQ1 72 aa8.1□□□□□ -1.11
HMGB2-201ENST00000296503 CHCHD7Q9BUK0 85 aa8.1□□□□□ -1.11
HMGB2-201ENST00000296503 SPANXCQ9NY87 97 aa8.1□□□□□ -1.11
HMGB2-201ENST00000296503 PKD1P98161 4303 aa8.1□□□□□ -1.11
HMGB2-201ENST00000296503 HECTD4Q9Y4D8 3996 aa8.1□□□□□ -1.11
HMGB2-201ENST00000296503 TRAV8-4A0A0B4J246 113 aa8.09□□□□□ -1.11
HMGB2-201ENST00000296503 A4D1N5 150 aa8.09□□□□□ -1.11
HMGB2-201ENST00000296503 RPL39LQ96EH5 51 aaKnown RBP8.09□□□□□ -1.11
HMGB2-201ENST00000296503 TRBV7-7A0A0K0K1E9 115 aa8.09□□□□□ -1.12
HMGB2-201ENST00000296503 TMEM223A0PJW6 202 aa8.09□□□□□ -1.12
HMGB2-201ENST00000296503 C16orf90A8MZG2 172 aa8.09□□□□□ -1.12
HMGB2-201ENST00000296503 UBE2WQ96B02 151 aa8.09□□□□□ -1.12
HMGB2-201ENST00000296503 A0A087WTM6 91 aa8.08□□□□□ -1.12
HMGB2-201ENST00000296503 ANGP03950 147 aaKnown RBP8.07□□□□□ -1.12
HMGB2-201ENST00000296503 ACYP1P07311 99 aa8.07□□□□□ -1.12
HMGB2-201ENST00000296503 TSPEAR-AS2P59090 65 aa8.07□□□□□ -1.12
HMGB2-201ENST00000296503 KRTAP10-2P60368 255 aa8.07□□□□□ -1.12
HMGB2-201ENST00000296503 NTN5Q8WTR8 489 aaPredicted RBP8.07□□□□□ -1.12
HMGB2-201ENST00000296503 RMI2Q96E14 147 aa8.06□□□□□ -1.12
HMGB2-201ENST00000296503 TMEM243Q9BU79 118 aa8.06□□□□□ -1.12
HMGB2-201ENST00000296503 IGKV2D-24A0A075B6R9 120 aa8.06□□□□□ -1.12
HMGB2-201ENST00000296503 CCDC179H3BU77 68 aa8.06□□□□□ -1.12
HMGB2-201ENST00000296503 UBE2L6O14933 153 aa8.06□□□□□ -1.12
HMGB2-201ENST00000296503 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
HMGB2-201ENST00000296503 TMEM170BQ5T4T1 132 aa8.06□□□□□ -1.12
HMGB2-201ENST00000296503 CRPP02741 224 aa8.05□□□□□ -1.12
HMGB2-201ENST00000296503 COX6CP09669 75 aa8.05□□□□□ -1.12
HMGB2-201ENST00000296503 SFTA2Q6UW10 78 aa8.05□□□□□ -1.12
HMGB2-201ENST00000296503 FUSP35637 526 aaKnown RBP eCLIP8.04□□□□□ -1.128e-10■■■■■ 28.6
HMGB2-201ENST00000296503 MUSTN1Q8IVN3 82 aa8.04□□□□□ -1.12
HMGB2-201ENST00000296503 I3L3M4 83 aa8.04□□□□□ -1.12
HMGB2-201ENST00000296503 LRCOL1A6NCL2 159 aa8.03□□□□□ -1.12
HMGB2-201ENST00000296503 HERV-K104P63124 156 aa8.03□□□□□ -1.12
HMGB2-201ENST00000296503 ENHOQ6UWT2 76 aa8.03□□□□□ -1.12
HMGB2-201ENST00000296503 PYGO1Q9Y3Y4 419 aa8.03□□□□□ -1.12
HMGB2-201ENST00000296503 DNAH11Q96DT5 4516 aa8.03□□□□□ -1.12
HMGB2-201ENST00000296503 TIMM17BO60830 172 aa8.02□□□□□ -1.12
HMGB2-201ENST00000296503 ZNF22P17026 224 aaPredicted RBP8.02□□□□□ -1.12
HMGB2-201ENST00000296503 C2orf82Q6UX34 121 aa8.02□□□□□ -1.12
HMGB2-201ENST00000296503 LINC00269Q8N2A0 174 aa8.02□□□□□ -1.12
HMGB2-201ENST00000296503 C1orf43Q9BWL3 253 aa8.02□□□□□ -1.12
HMGB2-201ENST00000296503 PKHD1P08F94 4074 aa8.02□□□□□ -1.13
HMGB2-201ENST00000296503 A0A0J9YXY3 114 aa8.02□□□□□ -1.13
HMGB2-201ENST00000296503 H7C423 109 aa8.02□□□□□ -1.13
HMGB2-201ENST00000296503 LECT2O14960 151 aa8.02□□□□□ -1.13
HMGB2-201ENST00000296503 CLPSL2Q6UWE3 100 aa8.02□□□□□ -1.13
HMGB2-201ENST00000296503 TEX49A0A1B0GTD5 131 aa8.01□□□□□ -1.13
HMGB2-201ENST00000296503 A0A1B0GUV1 79 aa8.01□□□□□ -1.13
HMGB2-201ENST00000296503 LST1O00453 97 aa8.01□□□□□ -1.13
HMGB2-201ENST00000296503 TRIAP1O43715 76 aa8.01□□□□□ -1.13
HMGB2-201ENST00000296503 MIAQ16674 131 aa8.01□□□□□ -1.13
HMGB2-201ENST00000296503 SMIM20Q8N5G0 67 aa8.01□□□□□ -1.13
HMGB2-201ENST00000296503 LITAFQ99732 161 aa8.01□□□□□ -1.13
HMGB2-201ENST00000296503 IGLV4-60A0A075B6I1 120 aa8□□□□□ -1.13
HMGB2-201ENST00000296503 MEIG1Q5JSS6 88 aa8□□□□□ -1.13
HMGB2-201ENST00000296503 Q8N814 137 aa8□□□□□ -1.13
HMGB2-201ENST00000296503 C20orf203Q8NBC4 194 aa8□□□□□ -1.13
HMGB2-201ENST00000296503 TMEM101Q96IK0 257 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms