RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 LOC389332A0A1B0GUA5 103 aa9.41□□□□□ -0.9
TMEM41A-201ENST00000296254 PEA15Q15121 130 aa9.41□□□□□ -0.9
TMEM41A-201ENST00000296254 C6orf226Q5I0X4 101 aa9.41□□□□□ -0.9
TMEM41A-201ENST00000296254 FAM19A3Q7Z5A8 133 aa9.41□□□□□ -0.9
TMEM41A-201ENST00000296254 MRPL55Q7Z7F7 128 aaKnown RBP9.41□□□□□ -0.9
TMEM41A-201ENST00000296254 ALKBH7Q9BT30 221 aaPredicted RBP9.41□□□□□ -0.9
TMEM41A-201ENST00000296254 BCE1O60756 84 aa9.4□□□□□ -0.9
TMEM41A-201ENST00000296254 NPSP0C0P6 89 aa9.4□□□□□ -0.9
TMEM41A-201ENST00000296254 RPL28P46779 137 aaKnown RBP9.4□□□□□ -0.9
TMEM41A-201ENST00000296254 VCX2Q9H322 139 aa9.4□□□□□ -0.9
TMEM41A-201ENST00000296254 IGIPA6NJ69 53 aa9.39□□□□□ -0.91
TMEM41A-201ENST00000296254 F8VRH5 84 aa9.39□□□□□ -0.91
TMEM41A-201ENST00000296254 Q8N8P6 123 aa9.39□□□□□ -0.91
TMEM41A-201ENST00000296254 CRYGAP11844 174 aa9.38□□□□□ -0.91
TMEM41A-201ENST00000296254 ORMDL2Q53FV1 153 aa9.38□□□□□ -0.91
TMEM41A-201ENST00000296254 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
TMEM41A-201ENST00000296254 TYMSOSQ8TAI1 123 aa9.38□□□□□ -0.91
TMEM41A-201ENST00000296254 MUC17Q685J3 4493 aa9.38□□□□□ -0.91
TMEM41A-201ENST00000296254 HERVK_113P63121 156 aa9.37□□□□□ -0.91
TMEM41A-201ENST00000296254 CDKN2A-AS1Q9UH64 79 aa9.37□□□□□ -0.91
TMEM41A-201ENST00000296254 K7EMI3 77 aa9.36□□□□□ -0.91
TMEM41A-201ENST00000296254 CXCL5P42830 114 aa9.36□□□□□ -0.91
TMEM41A-201ENST00000296254 SEC11AP67812 179 aa9.36□□□□□ -0.91
TMEM41A-201ENST00000296254 PAPPA-AS1Q5QFB9 102 aa9.34□□□□□ -0.91
TMEM41A-201ENST00000296254 LINC00167Q96N53 147 aa9.34□□□□□ -0.91
TMEM41A-201ENST00000296254 GEMIN7Q9H840 131 aaKnown RBP9.34□□□□□ -0.91
TMEM41A-201ENST00000296254 RPL37AP8A6NKH3 93 aa9.33□□□□□ -0.92
TMEM41A-201ENST00000296254 KRTAP13-2Q52LG2 175 aa9.33□□□□□ -0.92
TMEM41A-201ENST00000296254 KRTAP13-1Q8IUC0 172 aa9.33□□□□□ -0.92
TMEM41A-201ENST00000296254 TIMM17AQ99595 171 aa9.33□□□□□ -0.92
TMEM41A-201ENST00000296254 ANAPC11Q9NYG5 84 aa9.33□□□□□ -0.92
TMEM41A-201ENST00000296254 SMIM1B2RUZ4 78 aa9.32□□□□□ -0.92
TMEM41A-201ENST00000296254 NXT2Q9NPJ8 142 aaKnown RBP9.32□□□□□ -0.92
TMEM41A-201ENST00000296254 GAGE10A6NGK3 116 aa9.31□□□□□ -0.92
TMEM41A-201ENST00000296254 RETNLBQ9BQ08 111 aa9.31□□□□□ -0.92
TMEM41A-201ENST00000296254 IGLV5-37A0A075B6J1 123 aa9.3□□□□□ -0.92
TMEM41A-201ENST00000296254 UBE2AP49459 152 aa9.29□□□□□ -0.92
TMEM41A-201ENST00000296254 FAM229BQ4G0N7 80 aa9.29□□□□□ -0.92
TMEM41A-201ENST00000296254 LINC00304Q8N9R0 145 aa9.29□□□□□ -0.92
TMEM41A-201ENST00000296254 TOMM6Q96B49 74 aa9.29□□□□□ -0.92
TMEM41A-201ENST00000296254 IGLV5-45A0A087WSX0 123 aa9.28□□□□□ -0.92
TMEM41A-201ENST00000296254 G0S2P27469 103 aa9.28□□□□□ -0.92
TMEM41A-201ENST00000296254 PNRC1Q12796 327 aaPredicted RBP9.28□□□□□ -0.92
TMEM41A-201ENST00000296254 TPRXLQ17RH7 258 aa9.28□□□□□ -0.92
TMEM41A-201ENST00000296254 PDZD11Q5EBL8 140 aa9.28□□□□□ -0.92
TMEM41A-201ENST00000296254 COX7B2Q8TF08 81 aa9.28□□□□□ -0.92
TMEM41A-201ENST00000296254 ANAPC16Q96DE5 110 aa9.28□□□□□ -0.92
TMEM41A-201ENST00000296254 ERASQ7Z444 233 aa9.27□□□□□ -0.93
TMEM41A-201ENST00000296254 NKAPP1Q8N9T2 125 aa9.27□□□□□ -0.93
TMEM41A-201ENST00000296254 TINCRA0A1B0GVN0 87 aa9.26□□□□□ -0.93
TMEM41A-201ENST00000296254 MT-ND4LP03901 98 aa9.26□□□□□ -0.93
TMEM41A-201ENST00000296254 CDIP1Q9H305 208 aa9.25□□□□□ -0.93
TMEM41A-201ENST00000296254 IGKV2-28A0A075B6P5 120 aa9.24□□□□□ -0.93
TMEM41A-201ENST00000296254 IGKV2D-28P01615 120 aa9.24□□□□□ -0.93
TMEM41A-201ENST00000296254 ADCYAP1P18509 176 aa9.24□□□□□ -0.93
TMEM41A-201ENST00000296254 SCGB3A1Q96QR1 104 aa9.24□□□□□ -0.93
TMEM41A-201ENST00000296254 A0A1B0GVG6 124 aa9.23□□□□□ -0.93
TMEM41A-201ENST00000296254 SCO1O75880 301 aa9.23□□□□□ -0.93
TMEM41A-201ENST00000296254 SPINK8P0C7L1 97 aa9.23□□□□□ -0.93
TMEM41A-201ENST00000296254 RAB5BP61020 215 aa9.23□□□□□ -0.93
TMEM41A-201ENST00000296254 IGLV7-46A0A075B6I9 117 aa9.22□□□□□ -0.93
TMEM41A-201ENST00000296254 IGKV2D-26A0A0A0MRZ7 120 aa9.22□□□□□ -0.93
TMEM41A-201ENST00000296254 KRTAP9-6A0A140TA67 174 aa9.22□□□□□ -0.93
TMEM41A-201ENST00000296254 CTAG1AP78358 180 aa9.22□□□□□ -0.93
TMEM41A-201ENST00000296254 PRLHP81277 87 aa9.22□□□□□ -0.93
TMEM41A-201ENST00000296254 ATP5LO75964 103 aa9.2□□□□□ -0.94
TMEM41A-201ENST00000296254 KIAA1644Q3SXP7 199 aa9.2□□□□□ -0.94
TMEM41A-201ENST00000296254 CST9LQ9H4G1 147 aa9.2□□□□□ -0.94
TMEM41A-201ENST00000296254 LINC01549A6NIU2 74 aa9.19□□□□□ -0.94
TMEM41A-201ENST00000296254 TMEM126AQ9H061 195 aa9.19□□□□□ -0.94
TMEM41A-201ENST00000296254 LINC01546A6NGU7 62 aa9.18□□□□□ -0.94
TMEM41A-201ENST00000296254 TMEM238C9JI98 176 aa9.18□□□□□ -0.94
TMEM41A-201ENST00000296254 VPREB1P12018 145 aa9.18□□□□□ -0.94
TMEM41A-201ENST00000296254 FAM19A1Q7Z5A9 133 aa9.18□□□□□ -0.94
TMEM41A-201ENST00000296254 MRPL18Q9H0U6 180 aaKnown RBP9.18□□□□□ -0.94
TMEM41A-201ENST00000296254 H3BRM9 83 aa9.17□□□□□ -0.94
TMEM41A-201ENST00000296254 PFN2P35080 140 aa9.17□□□□□ -0.94
TMEM41A-201ENST00000296254 PMVKQ15126 192 aa9.17□□□□□ -0.94
TMEM41A-201ENST00000296254 M0R378 163 aa9.16□□□□□ -0.94
TMEM41A-201ENST00000296254 SND1-IT1Q9HBX3 110 aa9.16□□□□□ -0.94
TMEM41A-201ENST00000296254 IGLV5-39A0A0G2JS06 123 aa9.15□□□□□ -0.94
TMEM41A-201ENST00000296254 C3orf22Q8N5N4 141 aa9.15□□□□□ -0.94
TMEM41A-201ENST00000296254 PLEKHB2Q96CS7 222 aa9.15□□□□□ -0.94
TMEM41A-201ENST00000296254 PPDPFQ9H3Y8 114 aa9.15□□□□□ -0.94
TMEM41A-201ENST00000296254 ERG28Q9UKR5 140 aa9.14□□□□□ -0.95
TMEM41A-201ENST00000296254 TRAV9-1A0A075B6T8 112 aa9.13□□□□□ -0.95
TMEM41A-201ENST00000296254 IGLC3P0DOY3 106 aa9.13□□□□□ -0.95
TMEM41A-201ENST00000296254 RPL24P83731 157 aaKnown RBP9.13□□□□□ -0.95
TMEM41A-201ENST00000296254 CBLN2Q8IUK8 224 aa9.13□□□□□ -0.95
TMEM41A-201ENST00000296254 Q8NDZ9 215 aa9.13□□□□□ -0.95
TMEM41A-201ENST00000296254 COX17Q14061 63 aa9.12□□□□□ -0.95
TMEM41A-201ENST00000296254 GNB1LQ9BYB4 327 aa9.12□□□□□ -0.95
TMEM41A-201ENST00000296254 SPAG11AQ6PDA7 123 aa9.11□□□□□ -0.95
TMEM41A-201ENST00000296254 FP248Q71RG6 208 aaPredicted RBP9.11□□□□□ -0.95
TMEM41A-201ENST00000296254 HIGD2AQ9BW72 106 aa9.11□□□□□ -0.95
TMEM41A-201ENST00000296254 TMEM238LA0A1B0GVL6 79 aa9.1□□□□□ -0.95
TMEM41A-201ENST00000296254 ZNF22P17026 224 aaPredicted RBP9.1□□□□□ -0.95
TMEM41A-201ENST00000296254 RAB14P61106 215 aa9.1□□□□□ -0.95
TMEM41A-201ENST00000296254 FA2HQ7L5A8 372 aa9.1□□□□□ -0.95
TMEM41A-201ENST00000296254 SPRR4Q96PI1 79 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms