RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SFTA2Q6UW10 78 aa15.32■□□□□ 0.04
PTX3-201ENST00000295927 KLK5Q9Y337 293 aaPredicted RBP15.32■□□□□ 0.04
PTX3-201ENST00000295927 NUPR2A6NF83 97 aa15.31■□□□□ 0.04
PTX3-201ENST00000295927 A4D1N5 150 aa15.31■□□□□ 0.04
PTX3-201ENST00000295927 NPC2P61916 151 aa15.31■□□□□ 0.04
PTX3-201ENST00000295927 RPL24P83731 157 aaKnown RBP15.31■□□□□ 0.04
PTX3-201ENST00000295927 C2orf82Q6UX34 121 aa15.31■□□□□ 0.04
PTX3-201ENST00000295927 CFAP161Q6P656 301 aa15.3■□□□□ 0.04
PTX3-201ENST00000295927 C1orf43Q9BWL3 253 aa15.29■□□□□ 0.04
PTX3-201ENST00000295927 CKS1BP61024 79 aa15.29■□□□□ 0.04
PTX3-201ENST00000295927 C9orf118A6NHY6 69 aa15.28■□□□□ 0.04
PTX3-201ENST00000295927 IBA57-AS1B1ANH7 110 aa15.28■□□□□ 0.04
PTX3-201ENST00000295927 IFITM1P13164 125 aa15.28■□□□□ 0.04
PTX3-201ENST00000295927 IGKV2D-24A0A075B6R9 120 aa15.27■□□□□ 0.04
PTX3-201ENST00000295927 EIF4EBP3O60516 100 aaPredicted RBP15.27■□□□□ 0.04
PTX3-201ENST00000295927 CFC1BP0CG36 223 aa15.27■□□□□ 0.04
PTX3-201ENST00000295927 CFC1P0CG37 223 aa15.27■□□□□ 0.04
PTX3-201ENST00000295927 SPAG11BQ08648 103 aa15.27■□□□□ 0.04
PTX3-201ENST00000295927 Q9HAA7 133 aa15.27■□□□□ 0.04
PTX3-201ENST00000295927 CSMD3Q7Z407 3707 aa15.27■□□□□ 0.04
PTX3-201ENST00000295927 CXCL5P42830 114 aa15.27■□□□□ 0.03
PTX3-201ENST00000295927 NAA38Q9BRA0 125 aaKnown RBP15.27■□□□□ 0.03
PTX3-201ENST00000295927 LINC00308Q8TCZ7 52 aa15.26■□□□□ 0.03
PTX3-201ENST00000295927 H3BUT2 72 aa15.25■□□□□ 0.03
PTX3-201ENST00000295927 UBE2DNLQ8IWF7 75 aa15.25■□□□□ 0.03
PTX3-201ENST00000295927 ERG28Q9UKR5 140 aa15.25■□□□□ 0.03
PTX3-201ENST00000295927 DNAH7Q8WXX0 4024 aa15.24■□□□□ 0.03
PTX3-201ENST00000295927 LINC00158P58513 81 aa15.24■□□□□ 0.03
PTX3-201ENST00000295927 C6orf223Q8N319 242 aa15.24■□□□□ 0.03
PTX3-201ENST00000295927 PFN2P35080 140 aa15.23■□□□□ 0.03
PTX3-201ENST00000295927 MIR7-3HGQ8N6C7 128 aa15.23■□□□□ 0.03
PTX3-201ENST00000295927 LINC00526Q96FQ7 95 aa15.23■□□□□ 0.03
PTX3-201ENST00000295927 SOSTDC1Q6X4U4 206 aa15.23■□□□□ 0.03
PTX3-201ENST00000295927 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.22■□□□□ 0.03
PTX3-201ENST00000295927 COPS9Q8WXC6 57 aa15.21■□□□□ 0.02
PTX3-201ENST00000295927 A0A0B4J2C4 111 aa15.2■□□□□ 0.02
PTX3-201ENST00000295927 UNQ6190/PRO20217Q6UXQ8 127 aa15.19■□□□□ 0.02
PTX3-201ENST00000295927 C15orf56Q8N910 161 aa15.19■□□□□ 0.02
PTX3-201ENST00000295927 VAMP3Q15836 100 aa15.19■□□□□ 0.02
PTX3-201ENST00000295927 C10orf25Q5T742 122 aa15.19■□□□□ 0.02
PTX3-201ENST00000295927 PGPEP1Q9NXJ5 209 aa15.19■□□□□ 0.02
PTX3-201ENST00000295927 PRO1854Q9UHT4 67 aa15.19■□□□□ 0.02
PTX3-201ENST00000295927 DNAH1Q9P2D7 4330 aa15.19■□□□□ 0.02
PTX3-201ENST00000295927 HIGD2BQ4VC39 106 aa15.18■□□□□ 0.02
PTX3-201ENST00000295927 NTN5Q8WTR8 489 aaPredicted RBP15.18■□□□□ 0.02
PTX3-201ENST00000295927 LYSTQ99698 3801 aa15.18■□□□□ 0.02
PTX3-201ENST00000295927 FBN3Q75N90 2809 aa15.18■□□□□ 0.02
PTX3-201ENST00000295927 PLECQ15149 4684 aaKnown RBP15.18■□□□□ 0.02
PTX3-201ENST00000295927 A0A1W2PPM0 123 aa15.17■□□□□ 0.02
PTX3-201ENST00000295927 PPDPFQ9H3Y8 114 aa15.17■□□□□ 0.02
PTX3-201ENST00000295927 ZNF561-AS1K7EIQ3 104 aa15.16■□□□□ 0.02
PTX3-201ENST00000295927 C9orf116Q5BN46 136 aaPredicted RBP15.16■□□□□ 0.02
PTX3-201ENST00000295927 TSPAN13O95857 204 aa15.15■□□□□ 0.02
PTX3-201ENST00000295927 RMI2Q96E14 147 aa15.15■□□□□ 0.02
PTX3-201ENST00000295927 COX17Q14061 63 aa15.15■□□□□ 0.02
PTX3-201ENST00000295927 KRTAP1-5Q9BYS1 174 aa15.15■□□□□ 0.02
PTX3-201ENST00000295927 TENM2Q9NT68 2774 aa15.13■□□□□ 0.01
PTX3-201ENST00000295927 STARD9Q9P2P6 4700 aa15.13■□□□□ 0.01
PTX3-201ENST00000295927 FABP2P12104 132 aa15.12■□□□□ 0.01
PTX3-201ENST00000295927 GVQW2A0A096LPI5 108 aaPredicted RBP15.11■□□□□ 0.01
PTX3-201ENST00000295927 CASC10Q5T4H9 136 aa15.11■□□□□ 0.01
PTX3-201ENST00000295927 CAMK2N2Q96S95 79 aa15.11■□□□□ 0.01
PTX3-201ENST00000295927 C2orf48Q96LS8 159 aa15.1■□□□□ 0.01
PTX3-201ENST00000295927 C6orf48Q9UBA6 75 aa15.1■□□□□ 0.01
PTX3-201ENST00000295927 H7C2G1 150 aa15.09■□□□□ 0.01
PTX3-201ENST00000295927 SND1-IT1Q9HBX3 110 aa15.09■□□□□ 0.01
PTX3-201ENST00000295927 UBE2V1Q13404 147 aa15.09■□□□□ 0.01
PTX3-201ENST00000295927 SPCS1Q9Y6A9 102 aa15.07■□□□□ 0
PTX3-201ENST00000295927 TRBV30A0A0K0K1B3 111 aa15.06■□□□□ 0
PTX3-201ENST00000295927 GAGE10A6NGK3 116 aa15.06■□□□□ 0
PTX3-201ENST00000295927 USP17L23D6RBM5 183 aa15.06■□□□□ 0
PTX3-201ENST00000295927 Q6ZRU5 148 aa15.06■□□□□ 0
PTX3-201ENST00000295927 LOC107984156A0A0G2JMH3 177 aa15.05■□□□□ 0
PTX3-201ENST00000295927 ARL17AQ8IVW1 177 aa15.05■□□□□ 0
PTX3-201ENST00000295927 MUC7Q8TAX7 377 aa15.05■□□□□ 0
PTX3-201ENST00000295927 K7EP34 96 aa15.05■□□□□ -0
PTX3-201ENST00000295927 RPL13AP40429 203 aaKnown RBP15.05■□□□□ -0
PTX3-201ENST00000295927 F8WDY8 70 aa15.04■□□□□ -0
PTX3-201ENST00000295927 Q1RN00 199 aa15.04■□□□□ -0
PTX3-201ENST00000295927 GTF2H5Q6ZYL4 71 aa15.04■□□□□ -0
PTX3-201ENST00000295927 IGKV2-28A0A075B6P5 120 aa15.03■□□□□ -0
PTX3-201ENST00000295927 IGKV2D-28P01615 120 aa15.03■□□□□ -0
PTX3-201ENST00000295927 NBDYA0A0U1RRE5 68 aa15.02■□□□□ -0
PTX3-201ENST00000295927 TTC32Q5I0X7 151 aa15.02□□□□□ -0.01
PTX3-201ENST00000295927 PSMB2P49721 201 aa15.01□□□□□ -0.01
PTX3-201ENST00000295927 SYCNQ0VAF6 134 aa15.01□□□□□ -0.01
PTX3-201ENST00000295927 VPS13DQ5THJ4 4388 aa15.01□□□□□ -0.01
PTX3-201ENST00000295927 LECT2O14960 151 aa15□□□□□ -0.01
PTX3-201ENST00000295927 LINC00337Q8N6G1 96 aa15□□□□□ -0.01
PTX3-201ENST00000295927 TGP01266 2768 aa14.99□□□□□ -0.01
PTX3-201ENST00000295927 TRAV13-2A0A0B4J235 113 aa14.98□□□□□ -0.01
PTX3-201ENST00000295927 SLPIP03973 132 aa14.97□□□□□ -0.01
PTX3-201ENST00000295927 LYRM7Q5U5X0 104 aa14.97□□□□□ -0.01
PTX3-201ENST00000295927 WWC2-AS2Q96NR7 200 aa14.97□□□□□ -0.01
PTX3-201ENST00000295927 PSCAO43653 123 aa14.96□□□□□ -0.01
PTX3-201ENST00000295927 TRIAP1O43715 76 aa14.96□□□□□ -0.01
PTX3-201ENST00000295927 SCGB1C2P0DMR2 95 aa14.96□□□□□ -0.01
PTX3-201ENST00000295927 NDUFC2O95298 119 aa14.96□□□□□ -0.02
PTX3-201ENST00000295927 WFDC2Q14508 124 aa14.95□□□□□ -0.02
PTX3-201ENST00000295927 CARD19Q96LW7 228 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms