RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 XCL1P47992 114 aa10.21□□□□□ -0.78
NCK1-201ENST00000288986 SCGB1D4Q6XE38 83 aa10.21□□□□□ -0.78
NCK1-201ENST00000288986 SPANXB1Q9NS25 103 aaPredicted RBP10.2□□□□□ -0.78
NCK1-201ENST00000288986 A0A0J9YXY3 114 aa10.19□□□□□ -0.78
NCK1-201ENST00000288986 FOXI1Q12951 378 aa10.19□□□□□ -0.78
NCK1-201ENST00000288986 C5orf38Q86SI9 138 aa10.19□□□□□ -0.78
NCK1-201ENST00000288986 ZNF625Q96I27 306 aaPredicted RBP10.19□□□□□ -0.78
NCK1-201ENST00000288986 BATFQ16520 125 aa10.18□□□□□ -0.78
NCK1-201ENST00000288986 ORAOV1Q8WV07 137 aa10.18□□□□□ -0.78
NCK1-201ENST00000288986 A0A087WTM6 91 aa10.17□□□□□ -0.78
NCK1-201ENST00000288986 CEND1Q8N111 149 aa10.17□□□□□ -0.78
NCK1-201ENST00000288986 LITAFQ99732 161 aa10.17□□□□□ -0.78
NCK1-201ENST00000288986 EPPK1P58107 5090 aaKnown RBP10.17□□□□□ -0.78
NCK1-201ENST00000288986 LECT2O14960 151 aa10.17□□□□□ -0.78
NCK1-201ENST00000288986 COX7B2Q8TF08 81 aa10.17□□□□□ -0.78
NCK1-201ENST00000288986 LRCOL1A6NCL2 159 aa10.16□□□□□ -0.78
NCK1-201ENST00000288986 COX7A2LO14548 114 aa10.16□□□□□ -0.78
NCK1-201ENST00000288986 COL5A1-AS1Q5SY13 56 aa10.16□□□□□ -0.78
NCK1-201ENST00000288986 KRTAP26-1Q6PEX3 210 aa10.16□□□□□ -0.78
NCK1-201ENST00000288986 HIST1H4GQ99525 98 aa10.16□□□□□ -0.78
NCK1-201ENST00000288986 TIMM17BO60830 172 aa10.15□□□□□ -0.78
NCK1-201ENST00000288986 PKD1P98161 4303 aa10.15□□□□□ -0.78
NCK1-201ENST00000288986 A0A1B0GVY2 172 aa10.15□□□□□ -0.79
NCK1-201ENST00000288986 FXYD2P54710 66 aa10.15□□□□□ -0.79
NCK1-201ENST00000288986 HERV-K104P63124 156 aa10.15□□□□□ -0.79
NCK1-201ENST00000288986 HECTD4Q9Y4D8 3996 aa10.14□□□□□ -0.79
NCK1-201ENST00000288986 GAGE12HA6NDE8 117 aa10.14□□□□□ -0.79
NCK1-201ENST00000288986 GCSHP23434 173 aa10.14□□□□□ -0.79
NCK1-201ENST00000288986 Q8IZM0 81 aa10.14□□□□□ -0.79
NCK1-201ENST00000288986 TMEM238C9JI98 176 aa10.13□□□□□ -0.79
NCK1-201ENST00000288986 WFDC2Q14508 124 aa10.13□□□□□ -0.79
NCK1-201ENST00000288986 SRSF9Q13242 221 aaKnown RBP eCLIP10.13□□□□□ -0.79
NCK1-201ENST00000288986 KIAA0087Q14695 138 aa10.13□□□□□ -0.79
NCK1-201ENST00000288986 SPANXDQ9BXN6 97 aa10.13□□□□□ -0.79
NCK1-201ENST00000288986 SPANXCQ9NY87 97 aa10.13□□□□□ -0.79
NCK1-201ENST00000288986 DNAH11Q96DT5 4516 aa10.12□□□□□ -0.79
NCK1-201ENST00000288986 PKHD1P08F94 4074 aa10.12□□□□□ -0.79
NCK1-201ENST00000288986 SFTA2Q6UW10 78 aa10.12□□□□□ -0.79
NCK1-201ENST00000288986 TOMM7Q9P0U1 55 aa10.12□□□□□ -0.79
NCK1-201ENST00000288986 Q8N814 137 aa10.11□□□□□ -0.79
NCK1-201ENST00000288986 KRTAP10-2P60368 255 aa10.11□□□□□ -0.79
NCK1-201ENST00000288986 ADAMTSL4-AS1Q5T5F5 129 aa10.11□□□□□ -0.79
NCK1-201ENST00000288986 Q6ZVH6 145 aa10.11□□□□□ -0.79
NCK1-201ENST00000288986 A6NDN8 102 aa10.1□□□□□ -0.79
NCK1-201ENST00000288986 USP17L23D6RBM5 183 aa10.1□□□□□ -0.79
NCK1-201ENST00000288986 MALP21145 153 aa10.1□□□□□ -0.79
NCK1-201ENST00000288986 A0A1B0GWB2 263 aa10.09□□□□□ -0.79
NCK1-201ENST00000288986 APOMO95445 188 aa10.09□□□□□ -0.79
NCK1-201ENST00000288986 FUSP35637 526 aaKnown RBP eCLIP10.09□□□□□ -0.79
NCK1-201ENST00000288986 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.09□□□□□ -0.79
NCK1-201ENST00000288986 C6orf226Q5I0X4 101 aa10.09□□□□□ -0.79
NCK1-201ENST00000288986 TAX1BP3O14907 124 aa10.08□□□□□ -0.8
NCK1-201ENST00000288986 CXCL5P42830 114 aa10.08□□□□□ -0.8
NCK1-201ENST00000288986 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
NCK1-201ENST00000288986 C14orf177Q52M58 125 aa10.08□□□□□ -0.8
NCK1-201ENST00000288986 PGPEP1Q9NXJ5 209 aa10.08□□□□□ -0.8
NCK1-201ENST00000288986 PRSS2P07478 247 aa10.07□□□□□ -0.8
NCK1-201ENST00000288986 CIRBPQ14011 172 aaKnown RBP10.07□□□□□ -0.8
NCK1-201ENST00000288986 CFAP161Q6P656 301 aa10.07□□□□□ -0.8
NCK1-201ENST00000288986 PPDPFQ9H3Y8 114 aa10.07□□□□□ -0.8
NCK1-201ENST00000288986 TMEM238LA0A1B0GVL6 79 aa10.06□□□□□ -0.8
NCK1-201ENST00000288986 A6NJY4 79 aa10.06□□□□□ -0.8
NCK1-201ENST00000288986 IFITM1P13164 125 aa10.06□□□□□ -0.8
NCK1-201ENST00000288986 MUSTN1Q8IVN3 82 aa10.06□□□□□ -0.8
NCK1-201ENST00000288986 NHP2Q9NX24 153 aaKnown RBP10.05□□□□□ -0.8
NCK1-201ENST00000288986 IGLV5-52A0A0A0MRZ9 124 aa10.05□□□□□ -0.8
NCK1-201ENST00000288986 A0A1B0GV90 55 aa10.05□□□□□ -0.8
NCK1-201ENST00000288986 C16orf90A8MZG2 172 aa10.05□□□□□ -0.8
NCK1-201ENST00000288986 SPAG11BQ08648 103 aa10.05□□□□□ -0.8
NCK1-201ENST00000288986 MEIG1Q5JSS6 88 aa10.05□□□□□ -0.8
NCK1-201ENST00000288986 SMIM13P0DJ93 91 aa10.04□□□□□ -0.8
NCK1-201ENST00000288986 RPL24P83731 157 aaKnown RBP10.04□□□□□ -0.8
NCK1-201ENST00000288986 C2orf82Q6UX34 121 aa10.04□□□□□ -0.8
NCK1-201ENST00000288986 C15orf56Q8N910 161 aa10.04□□□□□ -0.8
NCK1-201ENST00000288986 NTN5Q8WTR8 489 aaPredicted RBP10.04□□□□□ -0.8
NCK1-201ENST00000288986 HIGD2BQ4VC39 106 aa10.03□□□□□ -0.8
NCK1-201ENST00000288986 DNAH5Q8TE73 4624 aa10.03□□□□□ -0.8
NCK1-201ENST00000288986 A4D1N5 150 aa10.03□□□□□ -0.8
NCK1-201ENST00000288986 CKS1BP61024 79 aa10.03□□□□□ -0.8
NCK1-201ENST00000288986 DAND5Q8N907 189 aa10.03□□□□□ -0.8
NCK1-201ENST00000288986 EIF4EBP3O60516 100 aaPredicted RBP10.02□□□□□ -0.81
NCK1-201ENST00000288986 LINC00308Q8TCZ7 52 aa10.02□□□□□ -0.81
NCK1-201ENST00000288986 ERG28Q9UKR5 140 aa10.02□□□□□ -0.81
NCK1-201ENST00000288986 K7ERJ3 54 aa10.01□□□□□ -0.81
NCK1-201ENST00000288986 CFC1BP0CG36 223 aa10.01□□□□□ -0.81
NCK1-201ENST00000288986 CFC1P0CG37 223 aa10.01□□□□□ -0.81
NCK1-201ENST00000288986 SOSTDC1Q6X4U4 206 aa10.01□□□□□ -0.81
NCK1-201ENST00000288986 GVQW2A0A096LPI5 108 aaPredicted RBP10□□□□□ -0.81
NCK1-201ENST00000288986 A0A0U1RRA0 63 aa10□□□□□ -0.81
NCK1-201ENST00000288986 COX17Q14061 63 aa10□□□□□ -0.81
NCK1-201ENST00000288986 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.99□□□□□ -0.81
NCK1-201ENST00000288986 A0A0B4J2C4 111 aa9.99□□□□□ -0.81
NCK1-201ENST00000288986 C9orf118A6NHY6 69 aa9.99□□□□□ -0.81
NCK1-201ENST00000288986 ZNF561-AS1K7EIQ3 104 aa9.99□□□□□ -0.81
NCK1-201ENST00000288986 MIR7-3HGQ8N6C7 128 aa9.99□□□□□ -0.81
NCK1-201ENST00000288986 COPS9Q8WXC6 57 aa9.99□□□□□ -0.81
NCK1-201ENST00000288986 LINC00526Q96FQ7 95 aa9.99□□□□□ -0.81
NCK1-201ENST00000288986 C10orf25Q5T742 122 aa9.99□□□□□ -0.81
NCK1-201ENST00000288986 C2orf48Q96LS8 159 aa9.99□□□□□ -0.81
NCK1-201ENST00000288986 F8WDY8 70 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms