RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 MIFP14174 115 aa1.64□□□□□ -2.15
CHD1-201ENST00000284049 SPATA45Q537H7 98 aa1.64□□□□□ -2.15
CHD1-201ENST00000284049 FRYLO94915 3013 aa1.64□□□□□ -2.15
CHD1-201ENST00000284049 DEFB133Q30KQ1 61 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 DMXL2Q8TDJ6 3036 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 ITPR2Q14571 2701 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 SSBP1Q04837 148 aaKnown RBP1.63□□□□□ -2.15
CHD1-201ENST00000284049 Q1T7F1 81 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 TMEM170BQ5T4T1 132 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 Q8N8P6 123 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 A6NN06 94 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 RPL38P63173 70 aaKnown RBP1.63□□□□□ -2.15
CHD1-201ENST00000284049 TRBV10-3A0A0K0K1G6 114 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 A8MU10 97 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 KLKP1Q107X0 134 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 ANAPC11Q9NYG5 84 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 GCN1Q92616 2671 aaKnown RBP1.63□□□□□ -2.15
CHD1-201ENST00000284049 WDFY4Q6ZS81 3184 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 DCHS1Q96JQ0 3298 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 TRAV1-2A0A0B4J238 106 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 MUC21A0A140T8X8 626 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 A0A1B0GWA3 101 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 hADV29S1A0JD25 119 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 C5orf42Q9H799 3197 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 OTOGQ6ZRI0 2925 aa1.63□□□□□ -2.15
CHD1-201ENST00000284049 F2Z2F3 143 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 CHKB-CPT1BH3BT56 60 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 TDRG1Q3Y452 100 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 SPRNQ5BIV9 151 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 ZNF833PQ6ZTB9 187 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 SPTAN1Q13813 2472 aaKnown RBP1.62□□□□□ -2.15
CHD1-201ENST00000284049 TRBV6-7A0A0A0MS04 114 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 CTXND1A0A1B0GTU2 59 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 XIRP2A4UGR9 3374 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 UNC80Q8N2C7 3258 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 DOCK11Q5JSL3 2073 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 EYSQ5T1H1 3165 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 COX6CP09669 75 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 LSM10Q969L4 123 aaKnown RBP1.62□□□□□ -2.15
CHD1-201ENST00000284049 FAM167A-AS1Q96KT0 104 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 FBN2P35556 2912 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 TRBV6-4A0A1B0GX49 114 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 SYS1-DBNDD2H3BUS1 97 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 C20orf197Q8N268 126 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 LIMD2Q9BT23 127 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 KRTAP9-4Q9BYQ2 154 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 FRYQ5TBA9 3013 aa1.62□□□□□ -2.15
CHD1-201ENST00000284049 ALKAL2Q6UX46 152 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 WFDC6Q9BQY6 131 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 PRO2289Q9P1D8 64 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 LAMA1P25391 3075 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 A0A087WWC5 75 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 HCG22E2RYF7 251 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 IGFL1Q6UW32 110 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 KRTAP1-3Q8IUG1 177 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 A0A0G2JQZ4 141 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 DEFB124Q8NES8 71 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 NXT2Q9NPJ8 142 aaKnown RBP1.61□□□□□ -2.15
CHD1-201ENST00000284049 CENPEQ02224 2701 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 MYO9AB2RTY4 2548 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 TRBV7-1A0A0A6YYK4 115 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 MOBPQ13875 183 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 PRO1854Q9UHT4 67 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 BAHCC1Q9P281 2608 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 TRBV7-3A0A075B6L6 115 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 A0A1W2PNN7 141 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 DEFB108AA8MXU0 73 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 IQCF6A8MYZ5 107 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 B4DSR2 109 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 LINC00304Q8N9R0 145 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 FDCSPQ8NFU4 85 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 MAST4O15021 2626 aa1.61□□□□□ -2.15
CHD1-201ENST00000284049 NUPR1O60356 82 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 DEFB107AQ8IZN7 70 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 R4GMQ9 66 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 ARHGAP32A7KAX9 2087 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 A0A1W2PPM0 123 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 C7orf77A4D0Y5 90 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 MGAQ8IWI9 3026 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 IGLV1-51P01701 117 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 ATP5EP2Q5VTU8 51 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 PRRC2CQ9Y520 2896 aaKnown RBP1.6□□□□□ -2.15
CHD1-201ENST00000284049 NAV2Q8IVL1 2488 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 LAMA5O15230 3695 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 NBEAQ8NFP9 2946 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 KRTAP9-6A0A140TA67 174 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 KRTAP9-7A8MTY7 169 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 IGKV2-40A0A087WW87 121 aaPredicted RBP1.6□□□□□ -2.15
CHD1-201ENST00000284049 LRCOL1A6NCL2 159 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 ZNF815PA8K554 130 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 UMAD1C9J7I0 102 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 IGKV2D-40P01614 121 aaPredicted RBP1.6□□□□□ -2.15
CHD1-201ENST00000284049 BRD3OSQ6XYD6 125 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 V9GYV3 84 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 ITPR3Q14573 2671 aa1.6□□□□□ -2.15
CHD1-201ENST00000284049 TMEM14DPA8MWL7 114 aa1.59□□□□□ -2.15
CHD1-201ENST00000284049 PPP1R17O96001 155 aa1.59□□□□□ -2.15
CHD1-201ENST00000284049 ELOF1P60002 83 aaKnown RBP1.59□□□□□ -2.15
CHD1-201ENST00000284049 HEPN1Q6WQI6 88 aa1.59□□□□□ -2.15
CHD1-201ENST00000284049 VMO1Q7Z5L0 202 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms