RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 ZNF815PA8K554 130 aa7.59□□□□□ -1.19
GGPS1-201ENST00000282841 UBE2D1P51668 147 aa7.59□□□□□ -1.19
GGPS1-201ENST00000282841 GAGE2AQ6NT46 116 aa7.59□□□□□ -1.19
GGPS1-201ENST00000282841 C3orf22Q8N5N4 141 aa7.59□□□□□ -1.19
GGPS1-201ENST00000282841 C11orf45Q8TAV5 145 aa7.59□□□□□ -1.19
GGPS1-201ENST00000282841 LINC00242Q5T6M2 205 aa7.58□□□□□ -1.2
GGPS1-201ENST00000282841 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
GGPS1-201ENST00000282841 CEND1Q8N111 149 aa7.58□□□□□ -1.2
GGPS1-201ENST00000282841 LOC107984156A0A0G2JMH3 177 aa7.58□□□□□ -1.2
GGPS1-201ENST00000282841 LYRM7Q5U5X0 104 aa7.58□□□□□ -1.2
GGPS1-201ENST00000282841 ARL17AQ8IVW1 177 aa7.58□□□□□ -1.2
GGPS1-201ENST00000282841 IGLV10-54A0A075B6I4 117 aa7.57□□□□□ -1.2
GGPS1-201ENST00000282841 TMEM223A0PJW6 202 aa7.57□□□□□ -1.2
GGPS1-201ENST00000282841 LINC01549A6NIU2 74 aa7.57□□□□□ -1.2
GGPS1-201ENST00000282841 MRPS36P82909 103 aaKnown RBP7.57□□□□□ -1.2
GGPS1-201ENST00000282841 PAPPA-AS1Q5QFB9 102 aa7.57□□□□□ -1.2
GGPS1-201ENST00000282841 A0A0U1RQV1 116 aa7.57□□□□□ -1.2
GGPS1-201ENST00000282841 OXTP01178 125 aa7.57□□□□□ -1.2
GGPS1-201ENST00000282841 KPRPQ5T749 579 aaPredicted RBP7.57□□□□□ -1.2
GGPS1-201ENST00000282841 SCGB1D4Q6XE38 83 aa7.57□□□□□ -1.2
GGPS1-201ENST00000282841 DEFB131BA0A096LNP1 70 aa7.56□□□□□ -1.2
GGPS1-201ENST00000282841 MYMXA0A1B0GTQ4 84 aa7.56□□□□□ -1.2
GGPS1-201ENST00000282841 J3QQQ9 107 aa7.56□□□□□ -1.2
GGPS1-201ENST00000282841 ZNF625Q96I27 306 aaPredicted RBP7.56□□□□□ -1.2
GGPS1-201ENST00000282841 DSCR8Q96T75 97 aa7.56□□□□□ -1.2
GGPS1-201ENST00000282841 IGHV3-30-3P0DP02 117 aa7.56□□□□□ -1.2
GGPS1-201ENST00000282841 LINC00269Q8N2A0 174 aa7.55□□□□□ -1.2
GGPS1-201ENST00000282841 C2orf48Q96LS8 159 aa7.55□□□□□ -1.2
GGPS1-201ENST00000282841 TIMM21Q9BVV7 248 aa7.55□□□□□ -1.2
GGPS1-201ENST00000282841 ICOSQ9Y6W8 199 aa7.55□□□□□ -1.2
GGPS1-201ENST00000282841 UQCRQO14949 82 aa7.55□□□□□ -1.2
GGPS1-201ENST00000282841 IGHV3-30P01768 117 aa7.55□□□□□ -1.2
GGPS1-201ENST00000282841 IGHV3-33P01772 117 aa7.55□□□□□ -1.2
GGPS1-201ENST00000282841 IGHV3-30-5P0DP03 117 aa7.55□□□□□ -1.2
GGPS1-201ENST00000282841 XCL1P47992 114 aa7.55□□□□□ -1.2
GGPS1-201ENST00000282841 HERVK_113P61574 105 aa7.55□□□□□ -1.2
GGPS1-201ENST00000282841 C5orf38Q86SI9 138 aa7.55□□□□□ -1.2
GGPS1-201ENST00000282841 HIGD1BQ9P298 99 aa7.55□□□□□ -1.2
GGPS1-201ENST00000282841 ANGP03950 147 aaKnown RBP7.54□□□□□ -1.2
GGPS1-201ENST00000282841 LGALS3P17931 250 aaKnown RBP7.54□□□□□ -1.2
GGPS1-201ENST00000282841 DPH3Q96FX2 82 aa7.54□□□□□ -1.2
GGPS1-201ENST00000282841 TM2D3Q9BRN9 247 aa7.54□□□□□ -1.2
GGPS1-201ENST00000282841 C11orf68Q9H3H3 251 aaKnown RBP7.54□□□□□ -1.2
GGPS1-201ENST00000282841 ZNF561-AS1K7EIQ3 104 aa7.53□□□□□ -1.2
GGPS1-201ENST00000282841 NPC2P61916 151 aa7.53□□□□□ -1.2
GGPS1-201ENST00000282841 LYPD5Q6UWN5 251 aa7.53□□□□□ -1.2
GGPS1-201ENST00000282841 WFDC10BQ8IUB3 73 aa7.53□□□□□ -1.2
GGPS1-201ENST00000282841 LINC00526Q96FQ7 95 aa7.53□□□□□ -1.2
GGPS1-201ENST00000282841 HIST1H4GQ99525 98 aa7.53□□□□□ -1.2
GGPS1-201ENST00000282841 SCGB1C2P0DMR2 95 aa7.53□□□□□ -1.2
GGPS1-201ENST00000282841 C6orf226Q5I0X4 101 aa7.53□□□□□ -1.2
GGPS1-201ENST00000282841 DAND5Q8N907 189 aa7.53□□□□□ -1.2
GGPS1-201ENST00000282841 TOMM7Q9P0U1 55 aa7.53□□□□□ -1.2
GGPS1-201ENST00000282841 DNAH7Q8WXX0 4024 aa7.52□□□□□ -1.21
GGPS1-201ENST00000282841 TRAV8-4A0A0B4J246 113 aa7.52□□□□□ -1.21
GGPS1-201ENST00000282841 PFN2P35080 140 aa7.52□□□□□ -1.21
GGPS1-201ENST00000282841 KLK12Q9UKR0 248 aa7.52□□□□□ -1.21
GGPS1-201ENST00000282841 FBN3Q75N90 2809 aa7.51□□□□□ -1.21
GGPS1-201ENST00000282841 LEPROTO15243 131 aa7.51□□□□□ -1.21
GGPS1-201ENST00000282841 ESRGQ1W209 222 aa7.51□□□□□ -1.21
GGPS1-201ENST00000282841 LINC00959A0A1B0GUT2 108 aa7.51□□□□□ -1.21
GGPS1-201ENST00000282841 hADV29S1A0JD25 119 aa7.51□□□□□ -1.21
GGPS1-201ENST00000282841 TAL2Q16559 108 aa7.51□□□□□ -1.21
GGPS1-201ENST00000282841 IGHV1-58A0A0C4DH39 117 aa7.5□□□□□ -1.21
GGPS1-201ENST00000282841 SMIM1B2RUZ4 78 aa7.5□□□□□ -1.21
GGPS1-201ENST00000282841 NDUFA12Q9UI09 145 aa7.5□□□□□ -1.21
GGPS1-201ENST00000282841 TRACP01848 142 aa7.49□□□□□ -1.21
GGPS1-201ENST00000282841 ADAMTSL4-AS1Q5T5F5 129 aa7.49□□□□□ -1.21
GGPS1-201ENST00000282841 H7C423 109 aa7.48□□□□□ -1.21
GGPS1-201ENST00000282841 EIF4EBP3O60516 100 aaPredicted RBP7.48□□□□□ -1.21
GGPS1-201ENST00000282841 REG3AQ06141 175 aa7.48□□□□□ -1.21
GGPS1-201ENST00000282841 LELP1Q5T871 98 aa7.48□□□□□ -1.21
GGPS1-201ENST00000282841 TCL1BO95988 128 aa7.48□□□□□ -1.21
GGPS1-201ENST00000282841 PRSS2P07478 247 aa7.48□□□□□ -1.21
GGPS1-201ENST00000282841 NTN5Q8WTR8 489 aaPredicted RBP7.48□□□□□ -1.21
GGPS1-201ENST00000282841 Q9H8V8 135 aa7.48□□□□□ -1.21
GGPS1-201ENST00000282841 SPANXCQ9NY87 97 aa7.48□□□□□ -1.21
GGPS1-201ENST00000282841 IGLV5-45A0A087WSX0 123 aa7.47□□□□□ -1.21
GGPS1-201ENST00000282841 A0A0J9YXY3 114 aa7.47□□□□□ -1.21
GGPS1-201ENST00000282841 C4orf48Q5BLP8 95 aa7.47□□□□□ -1.21
GGPS1-201ENST00000282841 UBE2WQ96B02 151 aa7.47□□□□□ -1.21
GGPS1-201ENST00000282841 CYSTM1Q9H1C7 97 aa7.47□□□□□ -1.21
GGPS1-201ENST00000282841 IGHV3OR16-9A0A0B4J2B5 98 aa7.47□□□□□ -1.21
GGPS1-201ENST00000282841 A0A1B0GUV1 79 aa7.46□□□□□ -1.21
GGPS1-201ENST00000282841 SLC25A20O43772 301 aa7.46□□□□□ -1.21
GGPS1-201ENST00000282841 CHCHD10Q8WYQ3 142 aaPredicted RBP7.46□□□□□ -1.22
GGPS1-201ENST00000282841 C2orf82Q6UX34 121 aa7.45□□□□□ -1.22
GGPS1-201ENST00000282841 COX7CP15954 63 aa7.45□□□□□ -1.22
GGPS1-201ENST00000282841 TMEM258P61165 79 aa7.45□□□□□ -1.22
GGPS1-201ENST00000282841 SS18Q15532 418 aa7.45□□□□□ -1.22
GGPS1-201ENST00000282841 ENHOQ6UWT2 76 aa7.45□□□□□ -1.22
GGPS1-201ENST00000282841 BRK1Q8WUW1 75 aa7.45□□□□□ -1.22
GGPS1-201ENST00000282841 PLECQ15149 4684 aaKnown RBP7.44□□□□□ -1.22
GGPS1-201ENST00000282841 TRAV10A0A0B4J240 114 aa7.44□□□□□ -1.22
GGPS1-201ENST00000282841 IGLV5-39A0A0G2JS06 123 aa7.44□□□□□ -1.22
GGPS1-201ENST00000282841 TEX49A0A1B0GTD5 131 aa7.44□□□□□ -1.22
GGPS1-201ENST00000282841 LINC01561Q8N1V8 128 aa7.44□□□□□ -1.22
GGPS1-201ENST00000282841 CRYGAP11844 174 aa7.44□□□□□ -1.22
GGPS1-201ENST00000282841 MUSTN1Q8IVN3 82 aa7.44□□□□□ -1.22
GGPS1-201ENST00000282841 Q9HAA7 133 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms