RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 H0YGX0 51 aa13.03□□□□□ -0.32
SSC4D-201ENST00000275560 DSCR9P59020 149 aa13.03□□□□□ -0.32
SSC4D-201ENST00000275560 Q6JHZ5 121 aa13.03□□□□□ -0.32
SSC4D-201ENST00000275560 OVOL2Q9BRP0 275 aa13.03□□□□□ -0.32
SSC4D-201ENST00000275560 J3KT08 172 aa13.02□□□□□ -0.33
SSC4D-201ENST00000275560 XCL1P47992 114 aa13.02□□□□□ -0.33
SSC4D-201ENST00000275560 USP17L23D6RBM5 183 aa13.01□□□□□ -0.33
SSC4D-201ENST00000275560 IBA57-AS1B1ANH7 110 aa13.01□□□□□ -0.33
SSC4D-201ENST00000275560 C6orf226Q5I0X4 101 aa13.01□□□□□ -0.33
SSC4D-201ENST00000275560 TRBV6-8A0A0A6YYG3 113 aa13□□□□□ -0.33
SSC4D-201ENST00000275560 A0A087WZ39 114 aa12.99□□□□□ -0.33
SSC4D-201ENST00000275560 TRBV6-4A0A1B0GX49 114 aa12.99□□□□□ -0.33
SSC4D-201ENST00000275560 DSCR8Q96T75 97 aa12.99□□□□□ -0.33
SSC4D-201ENST00000275560 RNASE1P07998 156 aaKnown RBP12.99□□□□□ -0.33
SSC4D-201ENST00000275560 ZNF462Q96JM2 2506 aa12.99□□□□□ -0.33
SSC4D-201ENST00000275560 ORMDL1Q9P0S3 153 aa12.98□□□□□ -0.33
SSC4D-201ENST00000275560 SERP2Q8N6R1 65 aa12.98□□□□□ -0.33
SSC4D-201ENST00000275560 UPK3BQ9BT76 320 aa12.98□□□□□ -0.33
SSC4D-201ENST00000275560 KRTAP10-9P60411 292 aa12.98□□□□□ -0.33
SSC4D-201ENST00000275560 LINC00959A0A1B0GUT2 108 aa12.97□□□□□ -0.33
SSC4D-201ENST00000275560 ITPR3Q14573 2671 aa12.96□□□□□ -0.33
SSC4D-201ENST00000275560 A0A096LPF7 62 aa12.96□□□□□ -0.33
SSC4D-201ENST00000275560 OXTP01178 125 aa12.96□□□□□ -0.33
SSC4D-201ENST00000275560 CCL24O00175 119 aa12.95□□□□□ -0.34
SSC4D-201ENST00000275560 FHL2Q14192 279 aa12.95□□□□□ -0.34
SSC4D-201ENST00000275560 MTORP42345 2549 aa12.95□□□□□ -0.34
SSC4D-201ENST00000275560 NANOS2P60321 138 aaKnown RBP12.95□□□□□ -0.34
SSC4D-201ENST00000275560 FAM19A1Q7Z5A9 133 aa12.95□□□□□ -0.34
SSC4D-201ENST00000275560 TRAV23DV6A0A075B6W5 121 aa12.94□□□□□ -0.34
SSC4D-201ENST00000275560 DEFB130BP0DP73 79 aa12.94□□□□□ -0.34
SSC4D-201ENST00000275560 DEFB130AP0DP74 79 aa12.94□□□□□ -0.34
SSC4D-201ENST00000275560 CCKP06307 115 aa12.94□□□□□ -0.34
SSC4D-201ENST00000275560 C16orf74Q96GX8 76 aa12.94□□□□□ -0.34
SSC4D-201ENST00000275560 DPH3Q96FX2 82 aa12.93□□□□□ -0.34
SSC4D-201ENST00000275560 SMIM9A6NGZ8 99 aa12.93□□□□□ -0.34
SSC4D-201ENST00000275560 LY6G6DO95868 133 aa12.93□□□□□ -0.34
SSC4D-201ENST00000275560 C9orf116Q5BN46 136 aaPredicted RBP12.92□□□□□ -0.34
SSC4D-201ENST00000275560 FLNAP21333 2647 aaKnown RBP12.91□□□□□ -0.34
SSC4D-201ENST00000275560 ENHOQ6UWT2 76 aa12.91□□□□□ -0.34
SSC4D-201ENST00000275560 TRAV25A0A0B4J276 109 aa12.91□□□□□ -0.34
SSC4D-201ENST00000275560 Q8N814 137 aa12.9□□□□□ -0.34
SSC4D-201ENST00000275560 ACANP16112 2415 aa12.9□□□□□ -0.34
SSC4D-201ENST00000275560 Q8N3U1 123 aa12.89□□□□□ -0.35
SSC4D-201ENST00000275560 Q8NDZ9 215 aa12.89□□□□□ -0.35
SSC4D-201ENST00000275560 GHRHP01286 108 aa12.89□□□□□ -0.35
SSC4D-201ENST00000275560 CSNK1G2-AS1Q8NCQ2 148 aa12.88□□□□□ -0.35
SSC4D-201ENST00000275560 IGLV10-54A0A075B6I4 117 aa12.88□□□□□ -0.35
SSC4D-201ENST00000275560 TMEM86BQ8N661 226 aa12.88□□□□□ -0.35
SSC4D-201ENST00000275560 TMEM258P61165 79 aa12.87□□□□□ -0.35
SSC4D-201ENST00000275560 GYPEP15421 78 aa12.86□□□□□ -0.35
SSC4D-201ENST00000275560 RPS28P62857 69 aaKnown RBP12.85□□□□□ -0.35
SSC4D-201ENST00000275560 PRB1P04280 392 aa12.85□□□□□ -0.35
SSC4D-201ENST00000275560 C19orf73Q9NVV2 129 aa12.85□□□□□ -0.35
SSC4D-201ENST00000275560 DNAJC9-AS1A6NH13 148 aa12.84□□□□□ -0.35
SSC4D-201ENST00000275560 M0R2N4 97 aa12.84□□□□□ -0.35
SSC4D-201ENST00000275560 C6orf99Q4VX62 202 aa12.84□□□□□ -0.35
SSC4D-201ENST00000275560 C5orf47Q569G3 176 aa12.84□□□□□ -0.35
SSC4D-201ENST00000275560 SPATA3Q8NHX4 192 aa12.84□□□□□ -0.35
SSC4D-201ENST00000275560 ESM1Q9NQ30 184 aa12.84□□□□□ -0.35
SSC4D-201ENST00000275560 LINC00167Q96N53 147 aa12.84□□□□□ -0.35
SSC4D-201ENST00000275560 C4orf26Q17RF5 130 aa12.83□□□□□ -0.36
SSC4D-201ENST00000275560 Q8IZM0 81 aa12.83□□□□□ -0.36
SSC4D-201ENST00000275560 LINC00269Q8N2A0 174 aa12.82□□□□□ -0.36
SSC4D-201ENST00000275560 JMJD7-PLA2G4BH0Y9G9 81 aa12.82□□□□□ -0.36
SSC4D-201ENST00000275560 TMEM256-PLSCR3K7ERE1 68 aa12.81□□□□□ -0.36
SSC4D-201ENST00000275560 C20orf197Q8N268 126 aa12.81□□□□□ -0.36
SSC4D-201ENST00000275560 VWFP04275 2813 aa12.8□□□□□ -0.36
SSC4D-201ENST00000275560 KIAA0087Q14695 138 aa12.79□□□□□ -0.36
SSC4D-201ENST00000275560 BBC3Q96PG8 261 aaPredicted RBP12.79□□□□□ -0.36
SSC4D-201ENST00000275560 UBL5Q9BZL1 73 aa12.77□□□□□ -0.36
SSC4D-201ENST00000275560 UBR5O95071 2799 aaPredicted RBP12.77□□□□□ -0.36
SSC4D-201ENST00000275560 S100A7L2Q5SY68 101 aa12.76□□□□□ -0.37
SSC4D-201ENST00000275560 C6orf223Q8N319 242 aa12.76□□□□□ -0.37
SSC4D-201ENST00000275560 HRCT1Q6UXD1 115 aa12.76□□□□□ -0.37
SSC4D-201ENST00000275560 IGLV1-51P01701 117 aa12.75□□□□□ -0.37
SSC4D-201ENST00000275560 DEFB113Q30KQ7 82 aa12.75□□□□□ -0.37
SSC4D-201ENST00000275560 DEFB4AO15263 64 aa12.75□□□□□ -0.37
SSC4D-201ENST00000275560 C10orf25Q5T742 122 aa12.75□□□□□ -0.37
SSC4D-201ENST00000275560 CHCHD10Q8WYQ3 142 aaPredicted RBP12.75□□□□□ -0.37
SSC4D-201ENST00000275560 LAMTOR3Q9UHA4 124 aa12.75□□□□□ -0.37
SSC4D-201ENST00000275560 Q5XG85 94 aa12.74□□□□□ -0.37
SSC4D-201ENST00000275560 LYPD5Q6UWN5 251 aa12.74□□□□□ -0.37
SSC4D-201ENST00000275560 ANGP03950 147 aaKnown RBP12.73□□□□□ -0.37
SSC4D-201ENST00000275560 HAMPP81172 84 aa12.73□□□□□ -0.37
SSC4D-201ENST00000275560 A0A1B0GUV1 79 aa12.73□□□□□ -0.37
SSC4D-201ENST00000275560 LINC00575Q6W349 94 aa12.73□□□□□ -0.37
SSC4D-201ENST00000275560 Q6ZQT0 140 aa12.73□□□□□ -0.37
SSC4D-201ENST00000275560 LINC01006Q8NI28 216 aa12.72□□□□□ -0.37
SSC4D-201ENST00000275560 RBM3P98179 157 aaKnown RBP12.72□□□□□ -0.37
SSC4D-201ENST00000275560 ATP5EP2Q5VTU8 51 aa12.72□□□□□ -0.37
SSC4D-201ENST00000275560 NDUFC2O95298 119 aa12.71□□□□□ -0.37
SSC4D-201ENST00000275560 UNQ6190/PRO20217Q6UXQ8 127 aa12.71□□□□□ -0.37
SSC4D-201ENST00000275560 USP24Q9UPU5 2620 aa12.71□□□□□ -0.37
SSC4D-201ENST00000275560 ZNF843Q8N446 348 aa12.71□□□□□ -0.37
SSC4D-201ENST00000275560 WFDC11Q8NEX6 87 aa12.71□□□□□ -0.37
SSC4D-201ENST00000275560 TRAV10A0A0B4J240 114 aa12.7□□□□□ -0.38
SSC4D-201ENST00000275560 CD164L2Q6UWJ8 174 aa12.7□□□□□ -0.38
SSC4D-201ENST00000275560 KRTAP1-3Q8IUG1 177 aa12.7□□□□□ -0.38
SSC4D-201ENST00000275560 LINC01547P58512 204 aaPredicted RBP12.69□□□□□ -0.38
SSC4D-201ENST00000275560 REG3AQ06141 175 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms