RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 TRBV10-1A0A0K0K1A3 114 aa9.06□□□□□ -0.96
COL8A1-202ENST00000273342 LINC01561Q8N1V8 128 aa9.06□□□□□ -0.96
COL8A1-202ENST00000273342 HECTD1Q9ULT8 2610 aa9.05□□□□□ -0.96
COL8A1-202ENST00000273342 DEFB130BP0DP73 79 aa9.05□□□□□ -0.96
COL8A1-202ENST00000273342 DEFB130AP0DP74 79 aa9.05□□□□□ -0.96
COL8A1-202ENST00000273342 FASNP49327 2511 aaKnown RBP9.05□□□□□ -0.96
COL8A1-202ENST00000273342 PF4P02776 101 aa9.05□□□□□ -0.96
COL8A1-202ENST00000273342 USP17L23D6RBM5 183 aa9.05□□□□□ -0.96
COL8A1-202ENST00000273342 J3KT08 172 aa9.05□□□□□ -0.96
COL8A1-202ENST00000273342 C4orf3Q8WVX3 66 aa9.05□□□□□ -0.96
COL8A1-202ENST00000273342 TRAV23DV6A0A075B6W5 121 aa9.04□□□□□ -0.96
COL8A1-202ENST00000273342 IGHV3OR16-9A0A0B4J2B5 98 aa9.04□□□□□ -0.96
COL8A1-202ENST00000273342 FAM19A3Q7Z5A8 133 aa9.04□□□□□ -0.96
COL8A1-202ENST00000273342 H0YGX0 51 aa9.03□□□□□ -0.96
COL8A1-202ENST00000273342 IGHV4-31P0DP07 118 aa9.03□□□□□ -0.96
COL8A1-202ENST00000273342 CRYGAP11844 174 aa9.02□□□□□ -0.96
COL8A1-202ENST00000273342 FAM19A1Q7Z5A9 133 aa9.02□□□□□ -0.97
COL8A1-202ENST00000273342 ORMDL1Q9P0S3 153 aa9.02□□□□□ -0.97
COL8A1-202ENST00000273342 CR1P17927 2039 aa9.02□□□□□ -0.97
COL8A1-202ENST00000273342 IL17DQ8TAD2 202 aa9.02□□□□□ -0.97
COL8A1-202ENST00000273342 IGLV10-54A0A075B6I4 117 aa9.01□□□□□ -0.97
COL8A1-202ENST00000273342 TRBV6-8A0A0A6YYG3 113 aa9.01□□□□□ -0.97
COL8A1-202ENST00000273342 C9orf116Q5BN46 136 aaPredicted RBP9.01□□□□□ -0.97
COL8A1-202ENST00000273342 HELZ2Q9BYK8 2649 aaKnown RBP9□□□□□ -0.97
COL8A1-202ENST00000273342 A0A096LNT2 108 aa9□□□□□ -0.97
COL8A1-202ENST00000273342 GIG44P09565 113 aaPredicted RBP9□□□□□ -0.97
COL8A1-202ENST00000273342 SS18Q15532 418 aa9□□□□□ -0.97
COL8A1-202ENST00000273342 ENHOQ6UWT2 76 aa9□□□□□ -0.97
COL8A1-202ENST00000273342 SERP2Q8N6R1 65 aa9□□□□□ -0.97
COL8A1-202ENST00000273342 IBA57-AS1B1ANH7 110 aa9□□□□□ -0.97
COL8A1-202ENST00000273342 Q6JHZ5 121 aa9□□□□□ -0.97
COL8A1-202ENST00000273342 WFDC11Q8NEX6 87 aa9□□□□□ -0.97
COL8A1-202ENST00000273342 OVOL2Q9BRP0 275 aa9□□□□□ -0.97
COL8A1-202ENST00000273342 CCL24O00175 119 aa8.99□□□□□ -0.97
COL8A1-202ENST00000273342 TRBV6-4A0A1B0GX49 114 aa8.99□□□□□ -0.97
COL8A1-202ENST00000273342 PLAC8L1A1L4L8 177 aa8.99□□□□□ -0.97
COL8A1-202ENST00000273342 ESM1Q9NQ30 184 aa8.99□□□□□ -0.97
COL8A1-202ENST00000273342 LINC00959A0A1B0GUT2 108 aa8.99□□□□□ -0.97
COL8A1-202ENST00000273342 SMIM9A6NGZ8 99 aa8.99□□□□□ -0.97
COL8A1-202ENST00000273342 A0A087WZ39 114 aa8.98□□□□□ -0.97
COL8A1-202ENST00000273342 J3QLI3 93 aa8.98□□□□□ -0.97
COL8A1-202ENST00000273342 OXTP01178 125 aa8.98□□□□□ -0.97
COL8A1-202ENST00000273342 DSCR9P59020 149 aa8.98□□□□□ -0.97
COL8A1-202ENST00000273342 Q8N3U1 123 aa8.98□□□□□ -0.97
COL8A1-202ENST00000273342 GHRHP01286 108 aa8.97□□□□□ -0.97
COL8A1-202ENST00000273342 DPH3Q96FX2 82 aa8.97□□□□□ -0.97
COL8A1-202ENST00000273342 FHL2Q14192 279 aa8.97□□□□□ -0.97
COL8A1-202ENST00000273342 TMEM86BQ8N661 226 aa8.97□□□□□ -0.97
COL8A1-202ENST00000273342 OBSCN-AS1Q96MR7 158 aa8.96□□□□□ -0.97
COL8A1-202ENST00000273342 CCKP06307 115 aa8.96□□□□□ -0.98
COL8A1-202ENST00000273342 C20orf197Q8N268 126 aa8.95□□□□□ -0.98
COL8A1-202ENST00000273342 UPK3BQ9BT76 320 aa8.95□□□□□ -0.98
COL8A1-202ENST00000273342 GYPEP15421 78 aa8.95□□□□□ -0.98
COL8A1-202ENST00000273342 C4orf26Q17RF5 130 aa8.95□□□□□ -0.98
COL8A1-202ENST00000273342 C16orf74Q96GX8 76 aa8.95□□□□□ -0.98
COL8A1-202ENST00000273342 C6orf99Q4VX62 202 aa8.94□□□□□ -0.98
COL8A1-202ENST00000273342 NANOS2P60321 138 aaKnown RBP8.94□□□□□ -0.98
COL8A1-202ENST00000273342 DEFB113Q30KQ7 82 aa8.94□□□□□ -0.98
COL8A1-202ENST00000273342 LINC00269Q8N2A0 174 aa8.94□□□□□ -0.98
COL8A1-202ENST00000273342 Q8N814 137 aa8.94□□□□□ -0.98
COL8A1-202ENST00000273342 FSHBP01225 129 aa8.94□□□□□ -0.98
COL8A1-202ENST00000273342 DEFB4AO15263 64 aa8.93□□□□□ -0.98
COL8A1-202ENST00000273342 M0R2N4 97 aa8.93□□□□□ -0.98
COL8A1-202ENST00000273342 UBR5O95071 2799 aaPredicted RBP8.93□□□□□ -0.98
COL8A1-202ENST00000273342 VWFP04275 2813 aa8.92□□□□□ -0.98
COL8A1-202ENST00000273342 Q8NDZ9 215 aa8.92□□□□□ -0.98
COL8A1-202ENST00000273342 HRCT1Q6UXD1 115 aa8.92□□□□□ -0.98
COL8A1-202ENST00000273342 SPATA3Q8NHX4 192 aa8.92□□□□□ -0.98
COL8A1-202ENST00000273342 HAMPP81172 84 aa8.91□□□□□ -0.98
COL8A1-202ENST00000273342 C5orf47Q569G3 176 aa8.91□□□□□ -0.98
COL8A1-202ENST00000273342 LAMTOR3Q9UHA4 124 aa8.91□□□□□ -0.98
COL8A1-202ENST00000273342 ATRQ13535 2644 aa8.91□□□□□ -0.98
COL8A1-202ENST00000273342 DNAJC9-AS1A6NH13 148 aa8.91□□□□□ -0.98
COL8A1-202ENST00000273342 TMEM258P61165 79 aa8.91□□□□□ -0.98
COL8A1-202ENST00000273342 TENM4Q6N022 2769 aa8.91□□□□□ -0.98
COL8A1-202ENST00000273342 S100A7L2Q5SY68 101 aa8.91□□□□□ -0.98
COL8A1-202ENST00000273342 ZNF843Q8N446 348 aa8.89□□□□□ -0.99
COL8A1-202ENST00000273342 UBL5Q9BZL1 73 aa8.89□□□□□ -0.99
COL8A1-202ENST00000273342 TRAV25A0A0B4J276 109 aa8.89□□□□□ -0.99
COL8A1-202ENST00000273342 TMEM256-PLSCR3K7ERE1 68 aa8.89□□□□□ -0.99
COL8A1-202ENST00000273342 SMR3AQ99954 134 aa8.89□□□□□ -0.99
COL8A1-202ENST00000273342 LY6G6DO95868 133 aa8.88□□□□□ -0.99
COL8A1-202ENST00000273342 SCXQ7RTU7 201 aa8.88□□□□□ -0.99
COL8A1-202ENST00000273342 C6orf223Q8N319 242 aa8.88□□□□□ -0.99
COL8A1-202ENST00000273342 JMJD7-PLA2G4BH0Y9G9 81 aa8.88□□□□□ -0.99
COL8A1-202ENST00000273342 ANGP03950 147 aaKnown RBP8.88□□□□□ -0.99
COL8A1-202ENST00000273342 CSNK1G2-AS1Q8NCQ2 148 aa8.88□□□□□ -0.99
COL8A1-202ENST00000273342 SNURFQ9Y675 71 aa8.87□□□□□ -0.99
COL8A1-202ENST00000273342 RPS28P62857 69 aaKnown RBP8.86□□□□□ -0.99
COL8A1-202ENST00000273342 Q8IZM0 81 aa8.86□□□□□ -0.99
COL8A1-202ENST00000273342 C10orf25Q5T742 122 aa8.86□□□□□ -0.99
COL8A1-202ENST00000273342 CHCHD10Q8WYQ3 142 aaPredicted RBP8.86□□□□□ -0.99
COL8A1-202ENST00000273342 C19orf73Q9NVV2 129 aa8.85□□□□□ -0.99
COL8A1-202ENST00000273342 RBM3P98179 157 aaKnown RBP8.85□□□□□ -0.99
COL8A1-202ENST00000273342 UNQ6190/PRO20217Q6UXQ8 127 aa8.85□□□□□ -0.99
COL8A1-202ENST00000273342 LINC01006Q8NI28 216 aa8.85□□□□□ -0.99
COL8A1-202ENST00000273342 UNC79Q9P2D8 2635 aa8.84□□□□□ -0.99
COL8A1-202ENST00000273342 TRAV10A0A0B4J240 114 aa8.83□□□□□ -1
COL8A1-202ENST00000273342 Q6ZQY7 126 aa8.83□□□□□ -1
COL8A1-202ENST00000273342 KIAA0087Q14695 138 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms