RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MALP21145 153 aa11.74□□□□□ -0.53
SQLE-201ENST00000265896 LINC00482Q8N8I6 264 aa11.74□□□□□ -0.53
SQLE-201ENST00000265896 KLK5Q9Y337 293 aaPredicted RBP11.74□□□□□ -0.53
SQLE-201ENST00000265896 GYPEP15421 78 aa11.73□□□□□ -0.53
SQLE-201ENST00000265896 CSDC2Q9Y534 153 aaKnown RBP11.73□□□□□ -0.53
SQLE-201ENST00000265896 IGHV3OR16-9A0A0B4J2B5 98 aa11.73□□□□□ -0.53
SQLE-201ENST00000265896 A0A087WVE0 104 aa11.72□□□□□ -0.53
SQLE-201ENST00000265896 HERV-K104P63124 156 aa11.72□□□□□ -0.53
SQLE-201ENST00000265896 C16orf74Q96GX8 76 aa11.72□□□□□ -0.53
SQLE-201ENST00000265896 DEFB121Q5J5C9 76 aa11.71□□□□□ -0.53
SQLE-201ENST00000265896 C19orf73Q9NVV2 129 aa11.7□□□□□ -0.54
SQLE-201ENST00000265896 TRAV13-2A0A0B4J235 113 aa11.7□□□□□ -0.54
SQLE-201ENST00000265896 Q6Q795 121 aa11.7□□□□□ -0.54
SQLE-201ENST00000265896 LINC01600Q96MT4 127 aa11.7□□□□□ -0.54
SQLE-201ENST00000265896 LINC00959A0A1B0GUT2 108 aa11.69□□□□□ -0.54
SQLE-201ENST00000265896 FAM240AA0A1B0GVK7 77 aa11.69□□□□□ -0.54
SQLE-201ENST00000265896 TRACP01848 142 aa11.69□□□□□ -0.54
SQLE-201ENST00000265896 CSNK1G2-AS1Q8NCQ2 148 aa11.69□□□□□ -0.54
SQLE-201ENST00000265896 WFDC9Q8NEX5 89 aa11.68□□□□□ -0.54
SQLE-201ENST00000265896 TRBV6-4A0A1B0GX49 114 aa11.68□□□□□ -0.54
SQLE-201ENST00000265896 TRAV25A0A0B4J276 109 aa11.67□□□□□ -0.54
SQLE-201ENST00000265896 HTN3P15516 51 aa11.67□□□□□ -0.54
SQLE-201ENST00000265896 RPL28P46779 137 aaKnown RBP11.67□□□□□ -0.54
SQLE-201ENST00000265896 COPS9Q8WXC6 57 aa11.67□□□□□ -0.54
SQLE-201ENST00000265896 LINC00269Q8N2A0 174 aa11.67□□□□□ -0.54
SQLE-201ENST00000265896 TRBV7-7A0A0K0K1E9 115 aa11.66□□□□□ -0.54
SQLE-201ENST00000265896 LINC00846Q9NV44 126 aa11.66□□□□□ -0.54
SQLE-201ENST00000265896 IGLV1-51P01701 117 aa11.65□□□□□ -0.54
SQLE-201ENST00000265896 FAM19A3Q7Z5A8 133 aa11.64□□□□□ -0.55
SQLE-201ENST00000265896 LINC00643Q86TS7 51 aa11.64□□□□□ -0.55
SQLE-201ENST00000265896 C9orf153Q5TBE3 101 aa11.64□□□□□ -0.55
SQLE-201ENST00000265896 LRRC75A-AS1Q8N1F1 130 aa11.64□□□□□ -0.55
SQLE-201ENST00000265896 A0A087WZ39 114 aa11.64□□□□□ -0.55
SQLE-201ENST00000265896 DEFB135Q30KP9 77 aa11.63□□□□□ -0.55
SQLE-201ENST00000265896 CXCL5P42830 114 aa11.63□□□□□ -0.55
SQLE-201ENST00000265896 PF4P02776 101 aa11.62□□□□□ -0.55
SQLE-201ENST00000265896 ANGP03950 147 aaKnown RBP11.61□□□□□ -0.55
SQLE-201ENST00000265896 C6orf223Q8N319 242 aa11.61□□□□□ -0.55
SQLE-201ENST00000265896 FAM222AQ5U5X8 452 aa11.61□□□□□ -0.55
SQLE-201ENST00000265896 Q8NDZ9 215 aa11.61□□□□□ -0.55
SQLE-201ENST00000265896 CYSTM1Q9H1C7 97 aa11.61□□□□□ -0.55
SQLE-201ENST00000265896 KRTAP10-3P60369 221 aa11.6□□□□□ -0.55
SQLE-201ENST00000265896 HIST1H4AP62805 103 aaKnown RBP11.6□□□□□ -0.55
SQLE-201ENST00000265896 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
SQLE-201ENST00000265896 ACYP1P07311 99 aa11.6□□□□□ -0.55
SQLE-201ENST00000265896 INAFM2P0DMQ5 153 aa11.6□□□□□ -0.55
SQLE-201ENST00000265896 IBA57-AS1B1ANH7 110 aa11.59□□□□□ -0.55
SQLE-201ENST00000265896 OVOL2Q9BRP0 275 aa11.59□□□□□ -0.55
SQLE-201ENST00000265896 FBN1P35555 2871 aaKnown RBP11.58□□□□□ -0.55
SQLE-201ENST00000265896 SS18Q15532 418 aa11.58□□□□□ -0.55
SQLE-201ENST00000265896 LOC107984640A0A0U1RRK4 108 aa11.58□□□□□ -0.56
SQLE-201ENST00000265896 HILS1P60008 231 aa11.58□□□□□ -0.56
SQLE-201ENST00000265896 KRTAP1-1Q07627 177 aa11.57□□□□□ -0.56
SQLE-201ENST00000265896 hADV29S1A0JD25 119 aa11.56□□□□□ -0.56
SQLE-201ENST00000265896 C10orf25Q5T742 122 aa11.56□□□□□ -0.56
SQLE-201ENST00000265896 NSD1Q96L73 2696 aaPredicted RBP11.56□□□□□ -0.56
SQLE-201ENST00000265896 TMEM86BQ8N661 226 aa11.55□□□□□ -0.56
SQLE-201ENST00000265896 CHCHD10Q8WYQ3 142 aaPredicted RBP11.55□□□□□ -0.56
SQLE-201ENST00000265896 NOTCH1P46531 2555 aa11.54□□□□□ -0.56
SQLE-201ENST00000265896 NANOS2P60321 138 aaKnown RBP11.54□□□□□ -0.56
SQLE-201ENST00000265896 C6orf99Q4VX62 202 aa11.54□□□□□ -0.56
SQLE-201ENST00000265896 PPDPFQ9H3Y8 114 aa11.54□□□□□ -0.56
SQLE-201ENST00000265896 A0A1B0GX51 115 aa11.54□□□□□ -0.56
SQLE-201ENST00000265896 X6R8D5 127 aa11.54□□□□□ -0.56
SQLE-201ENST00000265896 F8P00451 2351 aa11.53□□□□□ -0.56
SQLE-201ENST00000265896 CFAP161Q6P656 301 aa11.53□□□□□ -0.56
SQLE-201ENST00000265896 UNQ6190/PRO20217Q6UXQ8 127 aa11.53□□□□□ -0.56
SQLE-201ENST00000265896 C3orf22Q8N5N4 141 aa11.53□□□□□ -0.56
SQLE-201ENST00000265896 ORMDL1Q9P0S3 153 aa11.53□□□□□ -0.56
SQLE-201ENST00000265896 BAHCC1Q9P281 2608 aa11.52□□□□□ -0.56
SQLE-201ENST00000265896 H0YGX0 51 aa11.52□□□□□ -0.57
SQLE-201ENST00000265896 CELA1Q9UNI1 258 aa11.52□□□□□ -0.57
SQLE-201ENST00000265896 MAST4O15021 2626 aa11.52□□□□□ -0.57
SQLE-201ENST00000265896 XAGE1AQ9HD64 81 aa11.51□□□□□ -0.57
SQLE-201ENST00000265896 PRO0255Q9UI72 69 aa11.51□□□□□ -0.57
SQLE-201ENST00000265896 TENM3Q9P273 2699 aa11.51□□□□□ -0.57
SQLE-201ENST00000265896 REG3AQ06141 175 aa11.51□□□□□ -0.57
SQLE-201ENST00000265896 FLNBO75369 2602 aaKnown RBP11.5□□□□□ -0.57
SQLE-201ENST00000265896 S100A7L2Q5SY68 101 aa11.49□□□□□ -0.57
SQLE-201ENST00000265896 TRAV23DV6A0A075B6W5 121 aa11.49□□□□□ -0.57
SQLE-201ENST00000265896 M0R2N4 97 aa11.49□□□□□ -0.57
SQLE-201ENST00000265896 RPL18AQ02543 176 aaKnown RBP11.49□□□□□ -0.57
SQLE-201ENST00000265896 FAM19A1Q7Z5A9 133 aa11.49□□□□□ -0.57
SQLE-201ENST00000265896 IMUPQ9GZP8 106 aa11.49□□□□□ -0.57
SQLE-201ENST00000265896 STAB1Q9NY15 2570 aa11.49□□□□□ -0.57
SQLE-201ENST00000265896 LINC01561Q8N1V8 128 aa11.49□□□□□ -0.57
SQLE-201ENST00000265896 KLK12Q9UKR0 248 aa11.49□□□□□ -0.57
SQLE-201ENST00000265896 KIAA0087Q14695 138 aa11.48□□□□□ -0.57
SQLE-201ENST00000265896 Q8N814 137 aa11.47□□□□□ -0.57
SQLE-201ENST00000265896 Q8IZM0 81 aa11.47□□□□□ -0.57
SQLE-201ENST00000265896 UQCRQO14949 82 aa11.46□□□□□ -0.57
SQLE-201ENST00000265896 IGHV4-28A0A0C4DH34 117 aa11.46□□□□□ -0.57
SQLE-201ENST00000265896 ENHOQ6UWT2 76 aa11.46□□□□□ -0.57
SQLE-201ENST00000265896 DAD1P61803 113 aa11.45□□□□□ -0.58
SQLE-201ENST00000265896 C2orf48Q96LS8 159 aa11.45□□□□□ -0.58
SQLE-201ENST00000265896 CMC4P56277 68 aaPredicted RBP11.45□□□□□ -0.58
SQLE-201ENST00000265896 KIR2DL5BQ8NHK3 375 aa11.45□□□□□ -0.58
SQLE-201ENST00000265896 COX7CP15954 63 aa11.44□□□□□ -0.58
SQLE-201ENST00000265896 LAMTOR3Q9UHA4 124 aa11.43□□□□□ -0.58
SQLE-201ENST00000265896 USP17L23D6RBM5 183 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms