RNA–Protein interactions for RNA: ENST00000264896.7

SCARB2-201, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCARB2, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-201ENST00000264896 Q6JHZ5 121 aa12.52□□□□□ -0.41
SCARB2-201ENST00000264896 FAM236DA0A1B0GTK5 79 aa12.51□□□□□ -0.41
SCARB2-201ENST00000264896 FAM236CP0DP71 79 aa12.51□□□□□ -0.41
SCARB2-201ENST00000264896 EGFEM1PQ0D2K5 195 aa12.51□□□□□ -0.41
SCARB2-201ENST00000264896 PCSK5Q92824 1860 aa12.51□□□□□ -0.41
SCARB2-201ENST00000264896 COX7CP15954 63 aa12.51□□□□□ -0.41
SCARB2-201ENST00000264896 CCDC179H3BU77 68 aa12.51□□□□□ -0.41
SCARB2-201ENST00000264896 NANOS2P60321 138 aaKnown RBP12.5□□□□□ -0.41
SCARB2-201ENST00000264896 Q8N2B8 174 aa12.5□□□□□ -0.41
SCARB2-201ENST00000264896 Q8N814 137 aa12.5□□□□□ -0.41
SCARB2-201ENST00000264896 MUC4Q99102 2169 aa12.49□□□□□ -0.41
SCARB2-201ENST00000264896 PRR3P79522 188 aaKnown RBP12.49□□□□□ -0.41
SCARB2-201ENST00000264896 A0A0J9YWU9 116 aa12.48□□□□□ -0.41
SCARB2-201ENST00000264896 NDUFC2O95298 119 aa12.48□□□□□ -0.41
SCARB2-201ENST00000264896 C4orf48Q5BLP8 95 aa12.48□□□□□ -0.41
SCARB2-201ENST00000264896 A0A087WYN8 130 aa12.48□□□□□ -0.41
SCARB2-201ENST00000264896 TRBV10-3A0A0K0K1G6 114 aa12.47□□□□□ -0.41
SCARB2-201ENST00000264896 IGLV5-39A0A0G2JS06 123 aa12.46□□□□□ -0.42
SCARB2-201ENST00000264896 LOC107984640A0A0U1RRK4 108 aa12.46□□□□□ -0.42
SCARB2-201ENST00000264896 RPL37AP8A6NKH3 93 aa12.46□□□□□ -0.42
SCARB2-201ENST00000264896 CHKB-CPT1BH3BT56 60 aa12.45□□□□□ -0.42
SCARB2-201ENST00000264896 M0QXV9 152 aa12.45□□□□□ -0.42
SCARB2-201ENST00000264896 KLK9Q2XQG4 91 aa12.45□□□□□ -0.42
SCARB2-201ENST00000264896 RETNQ9HD89 108 aa12.43□□□□□ -0.42
SCARB2-201ENST00000264896 FAM19A3Q7Z5A8 133 aa12.43□□□□□ -0.42
SCARB2-201ENST00000264896 Q6ZTC4 211 aa12.42□□□□□ -0.42
SCARB2-201ENST00000264896 LINC01561Q8N1V8 128 aa12.42□□□□□ -0.42
SCARB2-201ENST00000264896 LINC00337Q8N6G1 96 aa12.41□□□□□ -0.42
SCARB2-201ENST00000264896 NDUFC1O43677 76 aa12.41□□□□□ -0.42
SCARB2-201ENST00000264896 COL27A1Q8IZC6 1860 aaPredicted RBP12.41□□□□□ -0.42
SCARB2-201ENST00000264896 IGHV3OR16-9A0A0B4J2B5 98 aa12.4□□□□□ -0.42
SCARB2-201ENST00000264896 IGKV4-1P06312 121 aa12.39□□□□□ -0.43
SCARB2-201ENST00000264896 PPDPFQ9H3Y8 114 aa12.39□□□□□ -0.43
SCARB2-201ENST00000264896 SNURFQ9Y675 71 aa12.39□□□□□ -0.43
SCARB2-201ENST00000264896 WFDC10BQ8IUB3 73 aa12.38□□□□□ -0.43
SCARB2-201ENST00000264896 C6orf223Q8N319 242 aa12.38□□□□□ -0.43
SCARB2-201ENST00000264896 C5orf42Q9H799 3197 aa12.38□□□□□ -0.43
SCARB2-201ENST00000264896 A0A087WVE0 104 aa12.37□□□□□ -0.43
SCARB2-201ENST00000264896 Q9UF83 564 aa12.37□□□□□ -0.43
SCARB2-201ENST00000264896 CDIP1Q9H305 208 aa12.37□□□□□ -0.43
SCARB2-201ENST00000264896 NDUFC2-KCTD14E9PQ53 114 aa12.36□□□□□ -0.43
SCARB2-201ENST00000264896 FHL3Q13643 280 aa12.36□□□□□ -0.43
SCARB2-201ENST00000264896 LYPD5Q6UWN5 251 aa12.36□□□□□ -0.43
SCARB2-201ENST00000264896 IGLV5-45A0A087WSX0 123 aa12.35□□□□□ -0.43
SCARB2-201ENST00000264896 SMCPP49901 116 aaPredicted RBP12.34□□□□□ -0.43
SCARB2-201ENST00000264896 WFDC13Q8IUB5 93 aa12.34□□□□□ -0.43
SCARB2-201ENST00000264896 BRK1Q8WUW1 75 aa12.34□□□□□ -0.43
SCARB2-201ENST00000264896 ATP5EP56381 51 aaPredicted RBP12.33□□□□□ -0.44
SCARB2-201ENST00000264896 PRO0461Q9UI25 63 aa12.33□□□□□ -0.44
SCARB2-201ENST00000264896 MPLKIPQ8TAP9 179 aa12.33□□□□□ -0.44
SCARB2-201ENST00000264896 C2orf48Q96LS8 159 aa12.33□□□□□ -0.44
SCARB2-201ENST00000264896 HTTP42858 3142 aa12.31□□□□□ -0.44
SCARB2-201ENST00000264896 TRAV7A0A075B6U4 112 aa12.31□□□□□ -0.44
SCARB2-201ENST00000264896 LINC00575Q6W349 94 aa12.31□□□□□ -0.44
SCARB2-201ENST00000264896 C1orf137Q5JT78 98 aa12.31□□□□□ -0.44
SCARB2-201ENST00000264896 M0R2N4 97 aa12.3□□□□□ -0.44
SCARB2-201ENST00000264896 LINC00846Q9NV44 126 aa12.3□□□□□ -0.44
SCARB2-201ENST00000264896 CHD9Q3L8U1 2897 aa12.3□□□□□ -0.44
SCARB2-201ENST00000264896 F8WDY8 70 aa12.29□□□□□ -0.44
SCARB2-201ENST00000264896 RANBP2P49792 3224 aaKnown RBP12.29□□□□□ -0.44
SCARB2-201ENST00000264896 FLNBO75369 2602 aaKnown RBP12.29□□□□□ -0.44
SCARB2-201ENST00000264896 LINC00474Q9P2X8 69 aa12.29□□□□□ -0.44
SCARB2-201ENST00000264896 PLAC8L1A1L4L8 177 aa12.28□□□□□ -0.44
SCARB2-201ENST00000264896 LRCOL1A6NCL2 159 aa12.28□□□□□ -0.44
SCARB2-201ENST00000264896 A8MTW9 85 aa12.28□□□□□ -0.44
SCARB2-201ENST00000264896 ZNF706Q9Y5V0 76 aaPredicted RBP12.27□□□□□ -0.44
SCARB2-201ENST00000264896 SOSTDC1Q6X4U4 206 aa12.26□□□□□ -0.45
SCARB2-201ENST00000264896 Q6ZRU5 148 aa12.26□□□□□ -0.45
SCARB2-201ENST00000264896 FSHBP01225 129 aa12.25□□□□□ -0.45
SCARB2-201ENST00000264896 Q8N3U1 123 aa12.25□□□□□ -0.45
SCARB2-201ENST00000264896 C7orf33Q8WU49 177 aa12.25□□□□□ -0.45
SCARB2-201ENST00000264896 CELA1Q9UNI1 258 aa12.25□□□□□ -0.45
SCARB2-201ENST00000264896 F8P00451 2351 aa12.25□□□□□ -0.45
SCARB2-201ENST00000264896 TRBV7-7A0A0K0K1E9 115 aa12.24□□□□□ -0.45
SCARB2-201ENST00000264896 REG3GQ6UW15 175 aa12.24□□□□□ -0.45
SCARB2-201ENST00000264896 SPINK6Q6UWN8 80 aa12.23□□□□□ -0.45
SCARB2-201ENST00000264896 Q6ZVQ6 151 aa12.22□□□□□ -0.45
SCARB2-201ENST00000264896 SBSPONQ8IVN8 264 aa12.22□□□□□ -0.45
SCARB2-201ENST00000264896 FAM30AQ9NZY2 134 aa12.22□□□□□ -0.45
SCARB2-201ENST00000264896 PRR4Q16378 134 aa12.21□□□□□ -0.46
SCARB2-201ENST00000264896 IGLV9-49A0A0B4J1Y8 123 aa12.21□□□□□ -0.46
SCARB2-201ENST00000264896 X6R8D5 127 aa12.2□□□□□ -0.46
SCARB2-201ENST00000264896 C10orf25Q5T742 122 aa12.19□□□□□ -0.46
SCARB2-201ENST00000264896 HRCT1Q6UXD1 115 aa12.19□□□□□ -0.46
SCARB2-201ENST00000264896 PRYO14603 147 aa12.19□□□□□ -0.46
SCARB2-201ENST00000264896 MRPL55Q7Z7F7 128 aaKnown RBP12.19□□□□□ -0.46
SCARB2-201ENST00000264896 USP24Q9UPU5 2620 aa12.18□□□□□ -0.46
SCARB2-201ENST00000264896 FAM218AQ96MZ4 157 aa12.18□□□□□ -0.46
SCARB2-201ENST00000264896 V9GYY9 64 aa12.17□□□□□ -0.46
SCARB2-201ENST00000264896 SMIM26A0A096LP01 95 aa12.16□□□□□ -0.46
SCARB2-201ENST00000264896 NUPR2A6NF83 97 aa12.16□□□□□ -0.46
SCARB2-201ENST00000264896 BPTFQ12830 3046 aa12.16□□□□□ -0.46
SCARB2-201ENST00000264896 LINC01547P58512 204 aaPredicted RBP12.15□□□□□ -0.46
SCARB2-201ENST00000264896 CASC2Q6XLA1 102 aa12.15□□□□□ -0.46
SCARB2-201ENST00000264896 HECTD1Q9ULT8 2610 aa12.15□□□□□ -0.46
SCARB2-201ENST00000264896 LITAFQ99732 161 aa12.15□□□□□ -0.46
SCARB2-201ENST00000264896 LINC01556Q5JQF7 62 aa12.14□□□□□ -0.47
SCARB2-201ENST00000264896 SEC61GP60059 68 aa12.13□□□□□ -0.47
SCARB2-201ENST00000264896 SPTSSBQ8NFR3 76 aa12.13□□□□□ -0.47
SCARB2-201ENST00000264896 LY6G6CO95867 125 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms