RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 LINC00959A0A1B0GUT2 108 aa8.67□□□□□ -1.02
CHMP3-201ENST00000263856 FAM19A3Q7Z5A8 133 aa8.67□□□□□ -1.02
CHMP3-201ENST00000263856 LRRC75A-AS1Q8N1F1 130 aa8.67□□□□□ -1.02
CHMP3-201ENST00000263856 SVIPQ8NHG7 77 aa8.67□□□□□ -1.02
CHMP3-201ENST00000263856 PF4P02776 101 aa8.66□□□□□ -1.02
CHMP3-201ENST00000263856 LINC00846Q9NV44 126 aa8.66□□□□□ -1.02
CHMP3-201ENST00000263856 FAM222AQ5U5X8 452 aa8.65□□□□□ -1.02
CHMP3-201ENST00000263856 C9orf116Q5BN46 136 aaPredicted RBP8.65□□□□□ -1.02
CHMP3-201ENST00000263856 Q8N3U1 123 aa8.65□□□□□ -1.02
CHMP3-201ENST00000263856 C3orf22Q8N5N4 141 aa8.65□□□□□ -1.02
CHMP3-201ENST00000263856 LINC01006Q8NI28 216 aa8.65□□□□□ -1.02
CHMP3-201ENST00000263856 IBA57-AS1B1ANH7 110 aa8.65□□□□□ -1.03
CHMP3-201ENST00000263856 TMEM86BQ8N661 226 aa8.65□□□□□ -1.03
CHMP3-201ENST00000263856 WFDC9Q8NEX5 89 aa8.65□□□□□ -1.03
CHMP3-201ENST00000263856 IMUPQ9GZP8 106 aa8.65□□□□□ -1.03
CHMP3-201ENST00000263856 SS18Q15532 418 aa8.64□□□□□ -1.03
CHMP3-201ENST00000263856 LINC00526Q96FQ7 95 aa8.64□□□□□ -1.03
CHMP3-201ENST00000263856 A0A087WZ39 114 aa8.64□□□□□ -1.03
CHMP3-201ENST00000263856 CXCL5P42830 114 aa8.64□□□□□ -1.03
CHMP3-201ENST00000263856 A0A1B0GX51 115 aa8.63□□□□□ -1.03
CHMP3-201ENST00000263856 hADV29S1A0JD25 119 aa8.63□□□□□ -1.03
CHMP3-201ENST00000263856 H0YGX0 51 aa8.63□□□□□ -1.03
CHMP3-201ENST00000263856 HTN3P15516 51 aa8.63□□□□□ -1.03
CHMP3-201ENST00000263856 OVOL2Q9BRP0 275 aa8.63□□□□□ -1.03
CHMP3-201ENST00000263856 ORMDL1Q9P0S3 153 aa8.63□□□□□ -1.03
CHMP3-201ENST00000263856 CFAP161Q6P656 301 aa8.62□□□□□ -1.03
CHMP3-201ENST00000263856 LINC00269Q8N2A0 174 aa8.62□□□□□ -1.03
CHMP3-201ENST00000263856 LOC107984640A0A0U1RRK4 108 aa8.62□□□□□ -1.03
CHMP3-201ENST00000263856 UQCRQO14949 82 aa8.62□□□□□ -1.03
CHMP3-201ENST00000263856 ANGP03950 147 aaKnown RBP8.62□□□□□ -1.03
CHMP3-201ENST00000263856 LINC00482Q8N8I6 264 aa8.61□□□□□ -1.03
CHMP3-201ENST00000263856 PPDPFQ9H3Y8 114 aa8.61□□□□□ -1.03
CHMP3-201ENST00000263856 ITPR2Q14571 2701 aa8.61□□□□□ -1.03
CHMP3-201ENST00000263856 UBR5O95071 2799 aaPredicted RBP8.61□□□□□ -1.03
CHMP3-201ENST00000263856 IGLV1-51P01701 117 aa8.6□□□□□ -1.03
CHMP3-201ENST00000263856 TMEM126AQ9H061 195 aa8.6□□□□□ -1.03
CHMP3-201ENST00000263856 CSNK1G2-AS1Q8NCQ2 148 aa8.6□□□□□ -1.03
CHMP3-201ENST00000263856 FAM110AQ9BQ89 295 aa8.6□□□□□ -1.03
CHMP3-201ENST00000263856 S100A7L2Q5SY68 101 aa8.59□□□□□ -1.03
CHMP3-201ENST00000263856 ZNF843Q8N446 348 aa8.59□□□□□ -1.03
CHMP3-201ENST00000263856 C19orf73Q9NVV2 129 aa8.59□□□□□ -1.03
CHMP3-201ENST00000263856 COX7CP15954 63 aa8.59□□□□□ -1.04
CHMP3-201ENST00000263856 KRTAP1-3Q8IUG1 177 aa8.59□□□□□ -1.04
CHMP3-201ENST00000263856 HILS1P60008 231 aa8.58□□□□□ -1.04
CHMP3-201ENST00000263856 ATOX1O00244 68 aa8.58□□□□□ -1.04
CHMP3-201ENST00000263856 CMC4P56277 68 aaPredicted RBP8.57□□□□□ -1.04
CHMP3-201ENST00000263856 DEFB135Q30KP9 77 aa8.57□□□□□ -1.04
CHMP3-201ENST00000263856 C6orf99Q4VX62 202 aa8.57□□□□□ -1.04
CHMP3-201ENST00000263856 CYSTM1Q9H1C7 97 aa8.57□□□□□ -1.04
CHMP3-201ENST00000263856 VWFP04275 2813 aa8.57□□□□□ -1.04
CHMP3-201ENST00000263856 TRAV23DV6A0A075B6W5 121 aa8.56□□□□□ -1.04
CHMP3-201ENST00000263856 RPL18AQ02543 176 aaKnown RBP8.56□□□□□ -1.04
CHMP3-201ENST00000263856 CHCHD10Q8WYQ3 142 aaPredicted RBP8.56□□□□□ -1.04
CHMP3-201ENST00000263856 FASNP49327 2511 aaKnown RBP8.56□□□□□ -1.04
CHMP3-201ENST00000263856 C6orf223Q8N319 242 aa8.55□□□□□ -1.04
CHMP3-201ENST00000263856 LAMTOR3Q9UHA4 124 aa8.55□□□□□ -1.04
CHMP3-201ENST00000263856 PRO0255Q9UI72 69 aa8.55□□□□□ -1.04
CHMP3-201ENST00000263856 USP17L23D6RBM5 183 aa8.55□□□□□ -1.04
CHMP3-201ENST00000263856 SMR3AQ99954 134 aa8.55□□□□□ -1.04
CHMP3-201ENST00000263856 Q8IZM0 81 aa8.54□□□□□ -1.04
CHMP3-201ENST00000263856 ENHOQ6UWT2 76 aa8.54□□□□□ -1.04
CHMP3-201ENST00000263856 Q8N814 137 aa8.54□□□□□ -1.04
CHMP3-201ENST00000263856 REG3AQ06141 175 aa8.53□□□□□ -1.04
CHMP3-201ENST00000263856 Q6JHZ5 121 aa8.53□□□□□ -1.04
CHMP3-201ENST00000263856 FAM19A1Q7Z5A9 133 aa8.53□□□□□ -1.04
CHMP3-201ENST00000263856 LINC01561Q8N1V8 128 aa8.53□□□□□ -1.04
CHMP3-201ENST00000263856 UNQ6190/PRO20217Q6UXQ8 127 aa8.52□□□□□ -1.05
CHMP3-201ENST00000263856 C2orf48Q96LS8 159 aa8.52□□□□□ -1.05
CHMP3-201ENST00000263856 CCKP06307 115 aa8.51□□□□□ -1.05
CHMP3-201ENST00000263856 NANOS2P60321 138 aaKnown RBP8.51□□□□□ -1.05
CHMP3-201ENST00000263856 KIR2DL5BQ8NHK3 375 aa8.51□□□□□ -1.05
CHMP3-201ENST00000263856 C10orf25Q5T742 122 aa8.51□□□□□ -1.05
CHMP3-201ENST00000263856 Q8NDZ9 215 aa8.51□□□□□ -1.05
CHMP3-201ENST00000263856 SPATA3Q8NHX4 192 aa8.51□□□□□ -1.05
CHMP3-201ENST00000263856 DAD1P61803 113 aa8.51□□□□□ -1.05
CHMP3-201ENST00000263856 XAGE1AQ9HD64 81 aa8.5□□□□□ -1.05
CHMP3-201ENST00000263856 TMEM256-PLSCR3K7ERE1 68 aa8.5□□□□□ -1.05
CHMP3-201ENST00000263856 GHRHP01286 108 aa8.5□□□□□ -1.05
CHMP3-201ENST00000263856 HAMPP81172 84 aa8.5□□□□□ -1.05
CHMP3-201ENST00000263856 DSCR8Q96T75 97 aa8.5□□□□□ -1.05
CHMP3-201ENST00000263856 KLK12Q9UKR0 248 aa8.5□□□□□ -1.05
CHMP3-201ENST00000263856 X6R8D5 127 aa8.5□□□□□ -1.05
CHMP3-201ENST00000263856 SPAG11BQ08648 103 aa8.49□□□□□ -1.05
CHMP3-201ENST00000263856 CD164L2Q6UWJ8 174 aa8.49□□□□□ -1.05
CHMP3-201ENST00000263856 LY6G6DO95868 133 aa8.49□□□□□ -1.05
CHMP3-201ENST00000263856 TENM4Q6N022 2769 aa8.49□□□□□ -1.05
CHMP3-201ENST00000263856 JMJD7-PLA2G4BH0Y9G9 81 aa8.49□□□□□ -1.05
CHMP3-201ENST00000263856 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
CHMP3-201ENST00000263856 UBL5Q9BZL1 73 aa8.49□□□□□ -1.05
CHMP3-201ENST00000263856 ATRQ13535 2644 aa8.48□□□□□ -1.05
CHMP3-201ENST00000263856 A0A1B0GUV1 79 aa8.48□□□□□ -1.05
CHMP3-201ENST00000263856 OBSCN-AS1Q96MR7 158 aa8.48□□□□□ -1.05
CHMP3-201ENST00000263856 KIAA0087Q14695 138 aa8.47□□□□□ -1.05
CHMP3-201ENST00000263856 J3KT08 172 aa8.47□□□□□ -1.05
CHMP3-201ENST00000263856 CRYGAP11844 174 aa8.47□□□□□ -1.05
CHMP3-201ENST00000263856 HECTD1Q9ULT8 2610 aa8.47□□□□□ -1.05
CHMP3-201ENST00000263856 CELA1Q9UNI1 258 aa8.47□□□□□ -1.05
CHMP3-201ENST00000263856 M0R2N4 97 aa8.46□□□□□ -1.05
CHMP3-201ENST00000263856 SCXQ7RTU7 201 aa8.46□□□□□ -1.05
CHMP3-201ENST00000263856 UNC79Q9P2D8 2635 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 250.6 ms