RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 A0A0U1RQV1 116 aa12.01□□□□□ -0.49
CROCCP3-201ENST00000263511 MRPL55Q7Z7F7 128 aaKnown RBP12.01□□□□□ -0.49
CROCCP3-201ENST00000263511 CHD8Q9HCK8 2581 aa12.01□□□□□ -0.49
CROCCP3-201ENST00000263511 A0A1B0GUV1 79 aa12.01□□□□□ -0.49
CROCCP3-201ENST00000263511 AMELXQ99217 191 aa12.01□□□□□ -0.49
CROCCP3-201ENST00000263511 PTPRSQ13332 1948 aa12.01□□□□□ -0.49
CROCCP3-201ENST00000263511 ATP5EP56381 51 aaPredicted RBP12.01□□□□□ -0.49
CROCCP3-201ENST00000263511 RAI1Q7Z5J4 1906 aaPredicted RBP12.01□□□□□ -0.49
CROCCP3-201ENST00000263511 FAM240AA0A1B0GVK7 77 aa12□□□□□ -0.49
CROCCP3-201ENST00000263511 LRRK2Q5S007 2527 aa12□□□□□ -0.49
CROCCP3-201ENST00000263511 C1orf137Q5JT78 98 aa12□□□□□ -0.49
CROCCP3-201ENST00000263511 C1orf134Q5TEV5 83 aa12□□□□□ -0.49
CROCCP3-201ENST00000263511 LYPD5Q6UWN5 251 aa12□□□□□ -0.49
CROCCP3-201ENST00000263511 Q8N814 137 aa11.99□□□□□ -0.49
CROCCP3-201ENST00000263511 V9GYY9 64 aa11.99□□□□□ -0.49
CROCCP3-201ENST00000263511 CEP295Q9C0D2 2601 aa11.99□□□□□ -0.49
CROCCP3-201ENST00000263511 C2orf48Q96LS8 159 aa11.99□□□□□ -0.49
CROCCP3-201ENST00000263511 NHLRC4P0CG21 123 aaPredicted RBP11.98□□□□□ -0.49
CROCCP3-201ENST00000263511 CIRBP-AS1Q8TBR5 109 aa11.98□□□□□ -0.49
CROCCP3-201ENST00000263511 SNURFQ9Y675 71 aa11.97□□□□□ -0.49
CROCCP3-201ENST00000263511 Q6JHZ5 121 aa11.97□□□□□ -0.49
CROCCP3-201ENST00000263511 SERP1Q9Y6X1 66 aa11.97□□□□□ -0.49
CROCCP3-201ENST00000263511 Q6ZSN1 163 aa11.96□□□□□ -0.49
CROCCP3-201ENST00000263511 ANKRD11Q6UB99 2663 aaPredicted RBP11.96□□□□□ -0.49
CROCCP3-201ENST00000263511 PRR3P79522 188 aaKnown RBP11.96□□□□□ -0.5
CROCCP3-201ENST00000263511 LINC01556Q5JQF7 62 aa11.95□□□□□ -0.5
CROCCP3-201ENST00000263511 TSPEAR-AS2P59090 65 aa11.95□□□□□ -0.5
CROCCP3-201ENST00000263511 FSHBP01225 129 aa11.94□□□□□ -0.5
CROCCP3-201ENST00000263511 Q8N2B8 174 aa11.93□□□□□ -0.5
CROCCP3-201ENST00000263511 LINC01561Q8N1V8 128 aa11.93□□□□□ -0.5
CROCCP3-201ENST00000263511 FAM30AQ9NZY2 134 aa11.93□□□□□ -0.5
CROCCP3-201ENST00000263511 PRR4Q16378 134 aa11.93□□□□□ -0.5
CROCCP3-201ENST00000263511 USP9YO00507 2555 aaPredicted RBP11.93□□□□□ -0.5
CROCCP3-201ENST00000263511 EXPH5Q8NEV8 1989 aa11.92□□□□□ -0.5
CROCCP3-201ENST00000263511 FHL3Q13643 280 aa11.92□□□□□ -0.5
CROCCP3-201ENST00000263511 ZNF462Q96JM2 2506 aa11.92□□□□□ -0.5
CROCCP3-201ENST00000263511 SETD2Q9BYW2 2564 aaPredicted RBP11.92□□□□□ -0.5
CROCCP3-201ENST00000263511 PRYO14603 147 aa11.91□□□□□ -0.5
CROCCP3-201ENST00000263511 ADAMTSL4-AS1Q5T5F5 129 aa11.91□□□□□ -0.5
CROCCP3-201ENST00000263511 ESRGQ1W209 222 aa11.91□□□□□ -0.5
CROCCP3-201ENST00000263511 Q9BRP9 147 aa11.9□□□□□ -0.5
CROCCP3-201ENST00000263511 A0A087WYN8 130 aa11.9□□□□□ -0.51
CROCCP3-201ENST00000263511 SRCAPQ6ZRS2 3230 aa11.9□□□□□ -0.51
CROCCP3-201ENST00000263511 EML5Q05BV3 1969 aa11.89□□□□□ -0.51
CROCCP3-201ENST00000263511 CELA1Q9UNI1 258 aa11.89□□□□□ -0.51
CROCCP3-201ENST00000263511 Q6ZVQ6 151 aa11.89□□□□□ -0.51
CROCCP3-201ENST00000263511 A0A096LNJ9 63 aa11.88□□□□□ -0.51
CROCCP3-201ENST00000263511 CPAMD8Q8IZJ3 1885 aa11.87□□□□□ -0.51
CROCCP3-201ENST00000263511 WDR87Q6ZQQ6 2873 aa11.87□□□□□ -0.51
CROCCP3-201ENST00000263511 IGHV6-1A0A0B4J1U7 121 aa11.87□□□□□ -0.51
CROCCP3-201ENST00000263511 Q6ZRU5 148 aa11.86□□□□□ -0.51
CROCCP3-201ENST00000263511 ADAMTS20P59510 1910 aa11.85□□□□□ -0.51
CROCCP3-201ENST00000263511 C11orf72Q8NBR9 251 aa11.84□□□□□ -0.51
CROCCP3-201ENST00000263511 LINC00208Q96KT6 92 aa11.83□□□□□ -0.51
CROCCP3-201ENST00000263511 A6NED7 52 aa11.83□□□□□ -0.52
CROCCP3-201ENST00000263511 SMIM26A0A096LP01 95 aa11.83□□□□□ -0.52
CROCCP3-201ENST00000263511 A0A087WSZ3 146 aa11.83□□□□□ -0.52
CROCCP3-201ENST00000263511 TRAV7A0A075B6U4 112 aa11.82□□□□□ -0.52
CROCCP3-201ENST00000263511 KIF25-AS1Q9Y6Z4 181 aa11.82□□□□□ -0.52
CROCCP3-201ENST00000263511 PKD1L2Q7Z442 2459 aa11.82□□□□□ -0.52
CROCCP3-201ENST00000263511 C1orf195Q5TG92 126 aa11.81□□□□□ -0.52
CROCCP3-201ENST00000263511 AGRNO00468 2067 aa11.81□□□□□ -0.52
CROCCP3-201ENST00000263511 LINC01547P58512 204 aaPredicted RBP11.81□□□□□ -0.52
CROCCP3-201ENST00000263511 LINC00575Q6W349 94 aa11.8□□□□□ -0.52
CROCCP3-201ENST00000263511 MDFIQ99750 246 aa11.78□□□□□ -0.52
CROCCP3-201ENST00000263511 CDIP1Q9H305 208 aa11.78□□□□□ -0.52
CROCCP3-201ENST00000263511 A0A087WVE0 104 aa11.78□□□□□ -0.52
CROCCP3-201ENST00000263511 PRLHP81277 87 aa11.78□□□□□ -0.52
CROCCP3-201ENST00000263511 C22orf24Q9Y442 160 aa11.78□□□□□ -0.52
CROCCP3-201ENST00000263511 SPTBN4Q9H254 2564 aa11.77□□□□□ -0.52
CROCCP3-201ENST00000263511 LIMD2Q9BT23 127 aa11.77□□□□□ -0.53
CROCCP3-201ENST00000263511 FASNP49327 2511 aaKnown RBP11.76□□□□□ -0.53
CROCCP3-201ENST00000263511 Q8N3U1 123 aa11.75□□□□□ -0.53
CROCCP3-201ENST00000263511 SMCR5Q8TEV8 140 aa11.74□□□□□ -0.53
CROCCP3-201ENST00000263511 A8MTW9 85 aa11.74□□□□□ -0.53
CROCCP3-201ENST00000263511 MTORP42345 2549 aa11.74□□□□□ -0.53
CROCCP3-201ENST00000263511 LINC00337Q8N6G1 96 aa11.73□□□□□ -0.53
CROCCP3-201ENST00000263511 IGLV5-39A0A0G2JS06 123 aa11.73□□□□□ -0.53
CROCCP3-201ENST00000263511 IGHV3OR16-9A0A0B4J2B5 98 aa11.73□□□□□ -0.53
CROCCP3-201ENST00000263511 TRBV7-6A0A0J9YX20 115 aa11.73□□□□□ -0.53
CROCCP3-201ENST00000263511 FAM19A4Q96LR4 140 aa11.72□□□□□ -0.53
CROCCP3-201ENST00000263511 RETNLBQ9BQ08 111 aa11.72□□□□□ -0.53
CROCCP3-201ENST00000263511 TET2Q6N021 2002 aaPredicted RBP11.72□□□□□ -0.53
CROCCP3-201ENST00000263511 H3BNG1 76 aa11.71□□□□□ -0.53
CROCCP3-201ENST00000263511 KRTAP24-1Q3LI83 254 aa11.7□□□□□ -0.54
CROCCP3-201ENST00000263511 DEFB116Q30KQ4 102 aa11.7□□□□□ -0.54
CROCCP3-201ENST00000263511 LINC00315P59091 139 aa11.69□□□□□ -0.54
CROCCP3-201ENST00000263511 PCOTHQ58A44 107 aa11.68□□□□□ -0.54
CROCCP3-201ENST00000263511 X6R8D5 127 aa11.68□□□□□ -0.54
CROCCP3-201ENST00000263511 SBSPONQ8IVN8 264 aa11.67□□□□□ -0.54
CROCCP3-201ENST00000263511 H0Y9P7 68 aa11.67□□□□□ -0.54
CROCCP3-201ENST00000263511 SOSTDC1Q6X4U4 206 aa11.67□□□□□ -0.54
CROCCP3-201ENST00000263511 LINC01546A6NGU7 62 aa11.66□□□□□ -0.54
CROCCP3-201ENST00000263511 HCG22E2RYF7 251 aa11.66□□□□□ -0.54
CROCCP3-201ENST00000263511 TRBV7-7A0A0K0K1E9 115 aa11.66□□□□□ -0.54
CROCCP3-201ENST00000263511 LINC00167Q96N53 147 aa11.65□□□□□ -0.54
CROCCP3-201ENST00000263511 C6orf48Q9UBA6 75 aa11.64□□□□□ -0.55
CROCCP3-201ENST00000263511 LINC00846Q9NV44 126 aa11.63□□□□□ -0.55
CROCCP3-201ENST00000263511 KIAA0087Q14695 138 aa11.63□□□□□ -0.55
CROCCP3-201ENST00000263511 SMCPP49901 116 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms