RNA–Protein interactions for RNA: ENST00000263228.3

UBE2R2-201, Transcript of ubiquitin conjugating enzyme E2 R2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2R2, Length 4,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2R2-201ENST00000263228 TEX15Q9BXT5 2789 aa12.07□□□□□ -0.48
UBE2R2-201ENST00000263228 SNURFQ9Y675 71 aa12.07□□□□□ -0.48
UBE2R2-201ENST00000263228 AMELXQ99217 191 aa12.06□□□□□ -0.48
UBE2R2-201ENST00000263228 C1orf43Q9BWL3 253 aa12.06□□□□□ -0.48
UBE2R2-201ENST00000263228 USP17L23D6RBM5 183 aa12.06□□□□□ -0.48
UBE2R2-201ENST00000263228 CHCHD10Q8WYQ3 142 aaPredicted RBP12.06□□□□□ -0.48
UBE2R2-201ENST00000263228 UPK3BQ9BT76 320 aa12.05□□□□□ -0.48
UBE2R2-201ENST00000263228 C1orf158Q8N1D5 194 aa12.05□□□□□ -0.48
UBE2R2-201ENST00000263228 NOTCH1P46531 2555 aa12.05□□□□□ -0.48
UBE2R2-201ENST00000263228 PRO0255Q9UI72 69 aa12.05□□□□□ -0.48
UBE2R2-201ENST00000263228 REG3AQ06141 175 aa12.04□□□□□ -0.48
UBE2R2-201ENST00000263228 SHISA2Q6UWI4 295 aa12.04□□□□□ -0.48
UBE2R2-201ENST00000263228 M0QXV9 152 aa12.02□□□□□ -0.49
UBE2R2-201ENST00000263228 Q6ZQY7 126 aa12.02□□□□□ -0.49
UBE2R2-201ENST00000263228 LINC00337Q8N6G1 96 aa12.01□□□□□ -0.49
UBE2R2-201ENST00000263228 LINC01546A6NGU7 62 aa12.01□□□□□ -0.49
UBE2R2-201ENST00000263228 ZNF575Q86XF7 245 aa12.01□□□□□ -0.49
UBE2R2-201ENST00000263228 TMEM256-PLSCR3K7ERE1 68 aa12.01□□□□□ -0.49
UBE2R2-201ENST00000263228 SOSTDC1Q6X4U4 206 aa12.01□□□□□ -0.49
UBE2R2-201ENST00000263228 FAM110AQ9BQ89 295 aa12□□□□□ -0.49
UBE2R2-201ENST00000263228 LINC00959A0A1B0GUT2 108 aa12□□□□□ -0.49
UBE2R2-201ENST00000263228 JMJD7-PLA2G4BH0Y9G9 81 aa12□□□□□ -0.49
UBE2R2-201ENST00000263228 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12□□□□□ -0.49
UBE2R2-201ENST00000263228 PPDPFQ9H3Y8 114 aa12□□□□□ -0.49
UBE2R2-201ENST00000263228 CELSR1Q9NYQ6 3014 aa12□□□□□ -0.49
UBE2R2-201ENST00000263228 BSNQ9UPA5 3926 aa12□□□□□ -0.49
UBE2R2-201ENST00000263228 HILS1P60008 231 aa11.99□□□□□ -0.49
UBE2R2-201ENST00000263228 FAM218AQ96MZ4 157 aa11.99□□□□□ -0.49
UBE2R2-201ENST00000263228 IBA57-AS1B1ANH7 110 aa11.99□□□□□ -0.49
UBE2R2-201ENST00000263228 PRORYQ9H606 182 aa11.99□□□□□ -0.49
UBE2R2-201ENST00000263228 UTP20O75691 2785 aaKnown RBP11.99□□□□□ -0.49
UBE2R2-201ENST00000263228 MPLKIPQ8TAP9 179 aa11.98□□□□□ -0.49
UBE2R2-201ENST00000263228 SMR3AQ99954 134 aa11.98□□□□□ -0.49
UBE2R2-201ENST00000263228 NREPQ16612 68 aa11.98□□□□□ -0.49
UBE2R2-201ENST00000263228 C3orf84H3BNL1 204 aa11.97□□□□□ -0.49
UBE2R2-201ENST00000263228 LINC00846Q9NV44 126 aa11.97□□□□□ -0.49
UBE2R2-201ENST00000263228 HRNRQ86YZ3 2850 aaPredicted RBP11.97□□□□□ -0.49
UBE2R2-201ENST00000263228 NTM-AS1Q6ZSK4 140 aa11.97□□□□□ -0.49
UBE2R2-201ENST00000263228 FAM19A1Q7Z5A9 133 aa11.97□□□□□ -0.49
UBE2R2-201ENST00000263228 LRRC75A-AS1Q8N1F1 130 aa11.97□□□□□ -0.49
UBE2R2-201ENST00000263228 PSCAO43653 123 aa11.96□□□□□ -0.49
UBE2R2-201ENST00000263228 TIMM17BO60830 172 aa11.96□□□□□ -0.49
UBE2R2-201ENST00000263228 UBE2BP63146 152 aa11.96□□□□□ -0.49
UBE2R2-201ENST00000263228 COX7CP15954 63 aa11.96□□□□□ -0.49
UBE2R2-201ENST00000263228 APOC4P55056 127 aa11.96□□□□□ -0.49
UBE2R2-201ENST00000263228 UNQ6190/PRO20217Q6UXQ8 127 aa11.96□□□□□ -0.49
UBE2R2-201ENST00000263228 HELZ2Q9BYK8 2649 aaKnown RBP11.96□□□□□ -0.5
UBE2R2-201ENST00000263228 A0A096LNI7 61 aa11.96□□□□□ -0.5
UBE2R2-201ENST00000263228 LINC01006Q8NI28 216 aa11.96□□□□□ -0.5
UBE2R2-201ENST00000263228 SPART-AS1P0CW21 52 aa11.96□□□□□ -0.5
UBE2R2-201ENST00000263228 PRR4Q16378 134 aa11.95□□□□□ -0.5
UBE2R2-201ENST00000263228 DIRC1Q969H9 104 aa11.95□□□□□ -0.5
UBE2R2-201ENST00000263228 F8WEM9 126 aa11.94□□□□□ -0.5
UBE2R2-201ENST00000263228 IGKV2-28A0A075B6P5 120 aa11.94□□□□□ -0.5
UBE2R2-201ENST00000263228 IGKV2D-28P01615 120 aa11.94□□□□□ -0.5
UBE2R2-201ENST00000263228 TRBV6-4A0A1B0GX49 114 aa11.93□□□□□ -0.5
UBE2R2-201ENST00000263228 A0A0U1RQV1 116 aa11.93□□□□□ -0.5
UBE2R2-201ENST00000263228 HRCT1Q6UXD1 115 aa11.93□□□□□ -0.5
UBE2R2-201ENST00000263228 C6orf223Q8N319 242 aa11.93□□□□□ -0.5
UBE2R2-201ENST00000263228 FAM19A4Q96LR4 140 aa11.93□□□□□ -0.5
UBE2R2-201ENST00000263228 NF1P21359 2839 aa11.93□□□□□ -0.5
UBE2R2-201ENST00000263228 CRYBG3Q68DQ2 2970 aa11.92□□□□□ -0.5
UBE2R2-201ENST00000263228 CELSR2Q9HCU4 2923 aa11.92□□□□□ -0.5
UBE2R2-201ENST00000263228 SERP2Q8N6R1 65 aa11.91□□□□□ -0.5
UBE2R2-201ENST00000263228 COL6A5A8TX70 2615 aa11.91□□□□□ -0.5
UBE2R2-201ENST00000263228 PKIGQ9Y2B9 76 aa11.91□□□□□ -0.5
UBE2R2-201ENST00000263228 BRK1Q8WUW1 75 aa11.9□□□□□ -0.51
UBE2R2-201ENST00000263228 LRCOL1A6NCL2 159 aa11.89□□□□□ -0.51
UBE2R2-201ENST00000263228 ETDCA0A1B0GVM5 59 aa11.89□□□□□ -0.51
UBE2R2-201ENST00000263228 Q6Q795 121 aa11.89□□□□□ -0.51
UBE2R2-201ENST00000263228 Q8N3U1 123 aa11.89□□□□□ -0.51
UBE2R2-201ENST00000263228 C11orf72Q8NBR9 251 aa11.88□□□□□ -0.51
UBE2R2-201ENST00000263228 FBN2P35556 2912 aa11.88□□□□□ -0.51
UBE2R2-201ENST00000263228 COX7BP24311 80 aa11.88□□□□□ -0.51
UBE2R2-201ENST00000263228 IGKV2-24A0A0C4DH68 120 aa11.88□□□□□ -0.51
UBE2R2-201ENST00000263228 UBE2DNLQ8IWF7 75 aa11.88□□□□□ -0.51
UBE2R2-201ENST00000263228 FAM240AA0A1B0GVK7 77 aa11.87□□□□□ -0.51
UBE2R2-201ENST00000263228 RPL28P46779 137 aaKnown RBP11.87□□□□□ -0.51
UBE2R2-201ENST00000263228 CCKP06307 115 aa11.86□□□□□ -0.51
UBE2R2-201ENST00000263228 NHLRC4P0CG21 123 aaPredicted RBP11.86□□□□□ -0.51
UBE2R2-201ENST00000263228 FAM19A5Q7Z5A7 132 aaPredicted RBP11.86□□□□□ -0.51
UBE2R2-201ENST00000263228 IMUPQ9GZP8 106 aa11.86□□□□□ -0.51
UBE2R2-201ENST00000263228 CYSRT1A8MQ03 144 aa11.86□□□□□ -0.51
UBE2R2-201ENST00000263228 LITAFQ99732 161 aa11.86□□□□□ -0.51
UBE2R2-201ENST00000263228 CELA1Q9UNI1 258 aa11.84□□□□□ -0.51
UBE2R2-201ENST00000263228 KIR2DL5BQ8NHK3 375 aa11.84□□□□□ -0.51
UBE2R2-201ENST00000263228 FAM236DA0A1B0GTK5 79 aa11.84□□□□□ -0.51
UBE2R2-201ENST00000263228 FAM236CP0DP71 79 aa11.84□□□□□ -0.51
UBE2R2-201ENST00000263228 FUSP35637 526 aaKnown RBP eCLIP11.84□□□□□ -0.51
UBE2R2-201ENST00000263228 SBSPONQ8IVN8 264 aa11.84□□□□□ -0.51
UBE2R2-201ENST00000263228 C5orf47Q569G3 176 aa11.83□□□□□ -0.52
UBE2R2-201ENST00000263228 IGSF10Q6WRI0 2623 aa11.83□□□□□ -0.52
UBE2R2-201ENST00000263228 FHL2Q14192 279 aa11.83□□□□□ -0.52
UBE2R2-201ENST00000263228 ZNF843Q8N446 348 aa11.83□□□□□ -0.52
UBE2R2-201ENST00000263228 Q8N9L7 120 aa11.83□□□□□ -0.52
UBE2R2-201ENST00000263228 BPY2O14599 106 aa11.82□□□□□ -0.52
UBE2R2-201ENST00000263228 A0A087WZ39 114 aa11.82□□□□□ -0.52
UBE2R2-201ENST00000263228 RPL37AP8A6NKH3 93 aa11.82□□□□□ -0.52
UBE2R2-201ENST00000263228 C9orf66Q5T8R8 295 aa11.82□□□□□ -0.52
UBE2R2-201ENST00000263228 CD164L2Q6UWJ8 174 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms