RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 DNAJC30Q96LL9 226 aa9.14□□□□□ -0.95
SNX1-201ENST00000261889 TMEM243Q9BU79 118 aa9.14□□□□□ -0.95
SNX1-201ENST00000261889 COX7B2Q8TF08 81 aa9.14□□□□□ -0.95
SNX1-201ENST00000261889 Q6Q795 121 aa9.13□□□□□ -0.95
SNX1-201ENST00000261889 PEMTQ9UBM1 199 aa9.13□□□□□ -0.95
SNX1-201ENST00000261889 IGLV5-45A0A087WSX0 123 aa9.13□□□□□ -0.95
SNX1-201ENST00000261889 KIR2DL5BQ8NHK3 375 aa9.13□□□□□ -0.95
SNX1-201ENST00000261889 BAHCC1Q9P281 2608 aa9.12□□□□□ -0.95
SNX1-201ENST00000261889 TRBV7-7A0A0K0K1E9 115 aa9.12□□□□□ -0.95
SNX1-201ENST00000261889 CXCL5P42830 114 aa9.12□□□□□ -0.95
SNX1-201ENST00000261889 J3QLI3 93 aa9.11□□□□□ -0.95
SNX1-201ENST00000261889 C6orf226Q5I0X4 101 aa9.11□□□□□ -0.95
SNX1-201ENST00000261889 A0A1B0GX51 115 aa9.1□□□□□ -0.95
SNX1-201ENST00000261889 TIMM17BO60830 172 aa9.1□□□□□ -0.95
SNX1-201ENST00000261889 LINC00643Q86TS7 51 aa9.1□□□□□ -0.95
SNX1-201ENST00000261889 SPATA3Q8NHX4 192 aa9.1□□□□□ -0.95
SNX1-201ENST00000261889 GIG44P09565 113 aaPredicted RBP9.09□□□□□ -0.95
SNX1-201ENST00000261889 FAM240AA0A1B0GVK7 77 aa9.09□□□□□ -0.95
SNX1-201ENST00000261889 CCL24O00175 119 aa9.09□□□□□ -0.95
SNX1-201ENST00000261889 DSCR8Q96T75 97 aa9.09□□□□□ -0.95
SNX1-201ENST00000261889 DEFB121Q5J5C9 76 aa9.09□□□□□ -0.95
SNX1-201ENST00000261889 C3orf22Q8N5N4 141 aa9.08□□□□□ -0.96
SNX1-201ENST00000261889 FAM110AQ9BQ89 295 aa9.08□□□□□ -0.96
SNX1-201ENST00000261889 TRAV23DV6A0A075B6W5 121 aa9.07□□□□□ -0.96
SNX1-201ENST00000261889 C4orf3Q8WVX3 66 aa9.07□□□□□ -0.96
SNX1-201ENST00000261889 CYSRT1A8MQ03 144 aa9.06□□□□□ -0.96
SNX1-201ENST00000261889 TRACP01848 142 aa9.06□□□□□ -0.96
SNX1-201ENST00000261889 RNF152Q8N8N0 203 aa9.06□□□□□ -0.96
SNX1-201ENST00000261889 FAM19A1Q7Z5A9 133 aa9.06□□□□□ -0.96
SNX1-201ENST00000261889 TRAV13-2A0A0B4J235 113 aa9.05□□□□□ -0.96
SNX1-201ENST00000261889 PLAC8L1A1L4L8 177 aa9.05□□□□□ -0.96
SNX1-201ENST00000261889 HTN3P15516 51 aa9.05□□□□□ -0.96
SNX1-201ENST00000261889 LINC00269Q8N2A0 174 aa9.04□□□□□ -0.96
SNX1-201ENST00000261889 NOTCH1P46531 2555 aa9.04□□□□□ -0.96
SNX1-201ENST00000261889 IGHV3OR16-9A0A0B4J2B5 98 aa9.04□□□□□ -0.96
SNX1-201ENST00000261889 GYPEP15421 78 aa9.04□□□□□ -0.96
SNX1-201ENST00000261889 LINC00482Q8N8I6 264 aa9.04□□□□□ -0.96
SNX1-201ENST00000261889 Q8NDZ9 215 aa9.04□□□□□ -0.96
SNX1-201ENST00000261889 DNAJC9-AS1A6NH13 148 aa9.03□□□□□ -0.96
SNX1-201ENST00000261889 M0R2N4 97 aa9.03□□□□□ -0.96
SNX1-201ENST00000261889 RPL28P46779 137 aaKnown RBP9.03□□□□□ -0.96
SNX1-201ENST00000261889 FBN1P35555 2871 aaKnown RBP9.03□□□□□ -0.96
SNX1-201ENST00000261889 TRBV6-8A0A0A6YYG3 113 aa9.03□□□□□ -0.96
SNX1-201ENST00000261889 LINC01561Q8N1V8 128 aa9.03□□□□□ -0.96
SNX1-201ENST00000261889 C6orf223Q8N319 242 aa9.02□□□□□ -0.97
SNX1-201ENST00000261889 INAFM2P0DMQ5 153 aa9.02□□□□□ -0.97
SNX1-201ENST00000261889 ENHOQ6UWT2 76 aa9.02□□□□□ -0.97
SNX1-201ENST00000261889 TMEM126AQ9H061 195 aa9.02□□□□□ -0.97
SNX1-201ENST00000261889 UQCRQO14949 82 aa9.01□□□□□ -0.97
SNX1-201ENST00000261889 SCXQ7RTU7 201 aa9.01□□□□□ -0.97
SNX1-201ENST00000261889 LINC01600Q96MT4 127 aa9.01□□□□□ -0.97
SNX1-201ENST00000261889 LINC00959A0A1B0GUT2 108 aa9.01□□□□□ -0.97
SNX1-201ENST00000261889 NBEAL1Q6ZS30 2694 aa9.01□□□□□ -0.97
SNX1-201ENST00000261889 ACYP1P07311 99 aa9.01□□□□□ -0.97
SNX1-201ENST00000261889 C2orf48Q96LS8 159 aa9.01□□□□□ -0.97
SNX1-201ENST00000261889 MAST4O15021 2626 aa9.01□□□□□ -0.97
SNX1-201ENST00000261889 FHL2Q14192 279 aa9□□□□□ -0.97
SNX1-201ENST00000261889 FAM19A5Q7Z5A7 132 aaPredicted RBP9□□□□□ -0.97
SNX1-201ENST00000261889 COX7CP15954 63 aa9□□□□□ -0.97
SNX1-201ENST00000261889 SS18Q15532 418 aa9□□□□□ -0.97
SNX1-201ENST00000261889 TRBV10-1A0A0K0K1A3 114 aa8.99□□□□□ -0.97
SNX1-201ENST00000261889 USP17L23D6RBM5 183 aa8.99□□□□□ -0.97
SNX1-201ENST00000261889 SMR3AQ99954 134 aa8.99□□□□□ -0.97
SNX1-201ENST00000261889 C6orf99Q4VX62 202 aa8.98□□□□□ -0.97
SNX1-201ENST00000261889 IL17DQ8TAD2 202 aa8.98□□□□□ -0.97
SNX1-201ENST00000261889 OXTP01178 125 aa8.98□□□□□ -0.97
SNX1-201ENST00000261889 ANGP03950 147 aaKnown RBP8.98□□□□□ -0.97
SNX1-201ENST00000261889 C10orf25Q5T742 122 aa8.97□□□□□ -0.97
SNX1-201ENST00000261889 COPS9Q8WXC6 57 aa8.97□□□□□ -0.97
SNX1-201ENST00000261889 XAGE1AQ9HD64 81 aa8.96□□□□□ -0.97
SNX1-201ENST00000261889 ORMDL1Q9P0S3 153 aa8.96□□□□□ -0.97
SNX1-201ENST00000261889 CSDC2Q9Y534 153 aaKnown RBP8.96□□□□□ -0.97
SNX1-201ENST00000261889 RPL18AQ02543 176 aaKnown RBP8.96□□□□□ -0.97
SNX1-201ENST00000261889 TENM3Q9P273 2699 aa8.96□□□□□ -0.98
SNX1-201ENST00000261889 CSMD3Q7Z407 3707 aa8.96□□□□□ -0.98
SNX1-201ENST00000261889 A0A087WZ39 114 aa8.95□□□□□ -0.98
SNX1-201ENST00000261889 FLNBO75369 2602 aaKnown RBP8.95□□□□□ -0.98
SNX1-201ENST00000261889 TRBV6-4A0A1B0GX49 114 aa8.95□□□□□ -0.98
SNX1-201ENST00000261889 LY6G6DO95868 133 aa8.95□□□□□ -0.98
SNX1-201ENST00000261889 NANOS2P60321 138 aaKnown RBP8.95□□□□□ -0.98
SNX1-201ENST00000261889 C20orf197Q8N268 126 aa8.95□□□□□ -0.98
SNX1-201ENST00000261889 HAMPP81172 84 aa8.95□□□□□ -0.98
SNX1-201ENST00000261889 DEFB135Q30KP9 77 aa8.94□□□□□ -0.98
SNX1-201ENST00000261889 LINC01006Q8NI28 216 aa8.94□□□□□ -0.98
SNX1-201ENST00000261889 IMUPQ9GZP8 106 aa8.94□□□□□ -0.98
SNX1-201ENST00000261889 COL6A5A8TX70 2615 aa8.94□□□□□ -0.98
SNX1-201ENST00000261889 GHRHP01286 108 aa8.94□□□□□ -0.98
SNX1-201ENST00000261889 C16orf74Q96GX8 76 aa8.94□□□□□ -0.98
SNX1-201ENST00000261889 LAMTOR3Q9UHA4 124 aa8.94□□□□□ -0.98
SNX1-201ENST00000261889 FAM222AQ5U5X8 452 aa8.93□□□□□ -0.98
SNX1-201ENST00000261889 UNQ6190/PRO20217Q6UXQ8 127 aa8.93□□□□□ -0.98
SNX1-201ENST00000261889 C4orf26Q17RF5 130 aa8.93□□□□□ -0.98
SNX1-201ENST00000261889 IBA57-AS1B1ANH7 110 aa8.93□□□□□ -0.98
SNX1-201ENST00000261889 S100A7L2Q5SY68 101 aa8.93□□□□□ -0.98
SNX1-201ENST00000261889 TMEM86BQ8N661 226 aa8.93□□□□□ -0.98
SNX1-201ENST00000261889 SNURFQ9Y675 71 aa8.93□□□□□ -0.98
SNX1-201ENST00000261889 STAB1Q9NY15 2570 aa8.93□□□□□ -0.98
SNX1-201ENST00000261889 ATOX1O00244 68 aa8.92□□□□□ -0.98
SNX1-201ENST00000261889 CSNK1G2-AS1Q8NCQ2 148 aa8.91□□□□□ -0.98
SNX1-201ENST00000261889 C19orf73Q9NVV2 129 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms