RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 MP68P56378 58 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 GAGE12BA1L429 117 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 GAGE7O76087 117 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 GAGE12FP0CL80 117 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 GAGE12GP0CL81 117 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 GAGE12IP0CL82 117 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 CTAG1AP78358 180 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 ZNF747Q9BV97 191 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 XCL2Q9UBD3 114 aa3.85□□□□□ -1.79
TOPBP1-201ENST00000260810 ANGP03950 147 aaKnown RBP3.84□□□□□ -1.79
TOPBP1-201ENST00000260810 HIGD1BQ9P298 99 aa3.84□□□□□ -1.79
TOPBP1-201ENST00000260810 IGKV2D-26A0A0A0MRZ7 120 aa3.84□□□□□ -1.79
TOPBP1-201ENST00000260810 IGHV3-16A0A0C4DH30 117 aa3.84□□□□□ -1.79
TOPBP1-201ENST00000260810 HIST3H2BBQ8N257 126 aa3.84□□□□□ -1.79
TOPBP1-201ENST00000260810 CAMK2N2Q96S95 79 aa3.84□□□□□ -1.79
TOPBP1-201ENST00000260810 ANAPC13Q9BS18 74 aa3.84□□□□□ -1.79
TOPBP1-201ENST00000260810 C11orf86A6NJI1 115 aa3.84□□□□□ -1.8
TOPBP1-201ENST00000260810 DLEU1O43261 78 aa3.84□□□□□ -1.8
TOPBP1-201ENST00000260810 TRBV7-3A0A075B6L6 115 aa3.84□□□□□ -1.8
TOPBP1-201ENST00000260810 IGKV2D-24A0A075B6R9 120 aa3.84□□□□□ -1.8
TOPBP1-201ENST00000260810 TRAV13-1A0A0B4J241 112 aa3.84□□□□□ -1.8
TOPBP1-201ENST00000260810 H3BUT2 72 aa3.84□□□□□ -1.8
TOPBP1-201ENST00000260810 TRACP01848 142 aa3.84□□□□□ -1.8
TOPBP1-201ENST00000260810 FXYD7P58549 80 aa3.84□□□□□ -1.8
TOPBP1-201ENST00000260810 SPINK13Q1W4C9 94 aa3.84□□□□□ -1.8
TOPBP1-201ENST00000260810 SPTSSBQ8NFR3 76 aa3.84□□□□□ -1.8
TOPBP1-201ENST00000260810 COX7B2Q8TF08 81 aa3.84□□□□□ -1.8
TOPBP1-201ENST00000260810 PRO1854Q9UHT4 67 aa3.84□□□□□ -1.8
TOPBP1-201ENST00000260810 KNCNA6PVL3 124 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 MRPL51Q4U2R6 128 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 FAM110AQ9BQ89 295 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 COX8AP10176 69 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 UBE2AP49459 152 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 TSPEAR-AS2P59090 65 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 KRTAP4-5Q9BYR2 181 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 A0A1B0GX51 115 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 SMKR1H3BMG3 65 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 J3QQQ9 107 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 GYPEP15421 78 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 OPRPNQ99935 248 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 GTSF1LQ9H1H1 148 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 IGLL1P15814 213 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 PTH2Q96A98 100 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 RNF183Q96D59 192 aa3.83□□□□□ -1.8
TOPBP1-201ENST00000260810 ATP5EP56381 51 aaPredicted RBP3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 SEC61GP60059 68 aa3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 B5MCH6 92 aa3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 LINC01561Q8N1V8 128 aa3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 ZNF664Q8N3J9 261 aa3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 C11orf45Q8TAV5 145 aa3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 DIRC1Q969H9 104 aa3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 RPL39LQ96EH5 51 aaKnown RBP3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 POLR2KP53803 58 aaKnown RBP3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 GAGE6Q13070 117 aa3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 LINC00467Q9BRT7 94 aa3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 IGLV4-69A0A075B6H9 119 aa3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 A0A1B0GV90 55 aa3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 TMEM256-PLSCR3K7ERE1 68 aa3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 LITAFQ99732 161 aa3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 HIST1H2BLQ99880 126 aa3.82□□□□□ -1.8
TOPBP1-201ENST00000260810 TRBV6-4A0A1B0GX49 114 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 C9orf118A6NHY6 69 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 CEND1Q8N111 149 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 C18orf32Q8TCD1 76 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 IGHV3-53P01767 116 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 COX17Q14061 63 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 TOMM6Q96B49 74 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 TINCRA0A1B0GVN0 87 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 TIMM17BO60830 172 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 MIAQ16674 131 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 FAM222AQ5U5X8 452 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 MRAPQ8TCY5 172 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 H3BT86 120 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 NOP10Q9NPE3 64 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 DHRS4-AS1Q9P1J3 65 aa3.81□□□□□ -1.8
TOPBP1-201ENST00000260810 A0A087WWL8 130 aa3.8□□□□□ -1.8
TOPBP1-201ENST00000260810 A8MZ25 164 aa3.8□□□□□ -1.8
TOPBP1-201ENST00000260810 GAGE2AQ6NT46 116 aa3.8□□□□□ -1.8
TOPBP1-201ENST00000260810 TTTY13Q9BZ97 58 aa3.8□□□□□ -1.8
TOPBP1-201ENST00000260810 IGIPA6NJ69 53 aa3.8□□□□□ -1.8
TOPBP1-201ENST00000260810 NPYP01303 97 aa3.8□□□□□ -1.8
TOPBP1-201ENST00000260810 C3orf79P0CE67 100 aa3.8□□□□□ -1.8
TOPBP1-201ENST00000260810 TM2D3Q9BRN9 247 aa3.8□□□□□ -1.8
TOPBP1-201ENST00000260810 M0QY20 66 aa3.8□□□□□ -1.8
TOPBP1-201ENST00000260810 HIST1H4AP62805 103 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-201ENST00000260810 C2orf91Q6ZV80 131 aa3.8□□□□□ -1.8
TOPBP1-201ENST00000260810 XCL1P47992 114 aa3.79□□□□□ -1.8
TOPBP1-201ENST00000260810 C14orf144Q96I85 54 aa3.79□□□□□ -1.8
TOPBP1-201ENST00000260810 ATOX1O00244 68 aa3.79□□□□□ -1.8
TOPBP1-201ENST00000260810 RPL18AQ02543 176 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-201ENST00000260810 A0A0B4J2C4 111 aa3.79□□□□□ -1.8
TOPBP1-201ENST00000260810 CHKB-CPT1BH3BT56 60 aa3.79□□□□□ -1.8
TOPBP1-201ENST00000260810 SUMO4Q6EEV6 95 aa3.79□□□□□ -1.8
TOPBP1-201ENST00000260810 FAM19A2Q8N3H0 131 aa3.79□□□□□ -1.8
TOPBP1-201ENST00000260810 PRR15LQ9BU68 103 aa3.79□□□□□ -1.8
TOPBP1-201ENST00000260810 V9GYY9 64 aa3.79□□□□□ -1.8
TOPBP1-201ENST00000260810 K7EP34 96 aa3.79□□□□□ -1.8
TOPBP1-201ENST00000260810 CFC1BP0CG36 223 aa3.79□□□□□ -1.8
TOPBP1-201ENST00000260810 CFC1P0CG37 223 aa3.79□□□□□ -1.8
TOPBP1-201ENST00000260810 UBE2V1Q13404 147 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms