RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 PPDPFQ9H3Y8 114 aa18.82■□□□□ 0.6
CCM2-201ENST00000258781 IGHV3-33P01772 117 aa18.81■□□□□ 0.6
CCM2-201ENST00000258781 KLK12Q9UKR0 248 aa18.8■□□□□ 0.6
CCM2-201ENST00000258781 IGLV10-54A0A075B6I4 117 aa18.8■□□□□ 0.6
CCM2-201ENST00000258781 TRAV10A0A0B4J240 114 aa18.8■□□□□ 0.6
CCM2-201ENST00000258781 LYRM7Q5U5X0 104 aa18.8■□□□□ 0.6
CCM2-201ENST00000258781 FBN3Q75N90 2809 aa18.78■□□□□ 0.6
CCM2-201ENST00000258781 A0A0U1RRA0 63 aa18.78■□□□□ 0.6
CCM2-201ENST00000258781 FOXI1Q12951 378 aa18.78■□□□□ 0.6
CCM2-201ENST00000258781 C6orf226Q5I0X4 101 aa18.78■□□□□ 0.6
CCM2-201ENST00000258781 ERG28Q9UKR5 140 aa18.78■□□□□ 0.6
CCM2-201ENST00000258781 ESRGQ1W209 222 aa18.77■□□□□ 0.6
CCM2-201ENST00000258781 WFDC10BQ8IUB3 73 aa18.77■□□□□ 0.6
CCM2-201ENST00000258781 IBA57-AS1B1ANH7 110 aa18.76■□□□□ 0.59
CCM2-201ENST00000258781 NHLRC4P0CG21 123 aaPredicted RBP18.76■□□□□ 0.59
CCM2-201ENST00000258781 ENHOQ6UWT2 76 aa18.75■□□□□ 0.59
CCM2-201ENST00000258781 LOC107984156A0A0G2JMH3 177 aa18.74■□□□□ 0.59
CCM2-201ENST00000258781 MALP21145 153 aa18.74■□□□□ 0.59
CCM2-201ENST00000258781 SOSTDC1Q6X4U4 206 aa18.74■□□□□ 0.59
CCM2-201ENST00000258781 ARL17AQ8IVW1 177 aa18.74■□□□□ 0.59
CCM2-201ENST00000258781 C15orf53Q8NAA6 179 aa18.73■□□□□ 0.59
CCM2-201ENST00000258781 TRAV8-4A0A0B4J246 113 aa18.73■□□□□ 0.59
CCM2-201ENST00000258781 GAGE12HA6NDE8 117 aa18.73■□□□□ 0.59
CCM2-201ENST00000258781 CRPP02741 224 aa18.73■□□□□ 0.59
CCM2-201ENST00000258781 CXCL5P42830 114 aa18.71■□□□□ 0.59
CCM2-201ENST00000258781 KIAA0087Q14695 138 aa18.71■□□□□ 0.59
CCM2-201ENST00000258781 MIR7-3HGQ8N6C7 128 aa18.7■□□□□ 0.58
CCM2-201ENST00000258781 CSMD3Q7Z407 3707 aa18.7■□□□□ 0.58
CCM2-201ENST00000258781 DNAH7Q8WXX0 4024 aa18.7■□□□□ 0.58
CCM2-201ENST00000258781 LINC00158P58513 81 aa18.69■□□□□ 0.58
CCM2-201ENST00000258781 CFAP161Q6P656 301 aa18.69■□□□□ 0.58
CCM2-201ENST00000258781 Q1RN00 199 aa18.69■□□□□ 0.58
CCM2-201ENST00000258781 UBE2WQ96B02 151 aa18.69■□□□□ 0.58
CCM2-201ENST00000258781 KLK5Q9Y337 293 aaPredicted RBP18.69■□□□□ 0.58
CCM2-201ENST00000258781 H7C2G1 150 aa18.68■□□□□ 0.58
CCM2-201ENST00000258781 CKS1BP61024 79 aa18.68■□□□□ 0.58
CCM2-201ENST00000258781 H3BMG7 143 aa18.67■□□□□ 0.58
CCM2-201ENST00000258781 TRBV20-1A0A075B6N2 111 aa18.67■□□□□ 0.58
CCM2-201ENST00000258781 PSMB2P49721 201 aa18.67■□□□□ 0.58
CCM2-201ENST00000258781 LINC01556Q5JQF7 62 aa18.67■□□□□ 0.58
CCM2-201ENST00000258781 TRBV30A0A0K0K1B3 111 aa18.65■□□□□ 0.58
CCM2-201ENST00000258781 DYNC2H1Q8NCM8 4307 aaKnown RBP18.65■□□□□ 0.58
CCM2-201ENST00000258781 C2orf82Q6UX34 121 aa18.65■□□□□ 0.58
CCM2-201ENST00000258781 SCGB1C2P0DMR2 95 aa18.64■□□□□ 0.57
CCM2-201ENST00000258781 RPL13AP40429 203 aaKnown RBP18.64■□□□□ 0.57
CCM2-201ENST00000258781 PFN2P35080 140 aa18.63■□□□□ 0.57
CCM2-201ENST00000258781 F8W1H4 67 aa18.63■□□□□ 0.57
CCM2-201ENST00000258781 TCL1BO95988 128 aa18.61■□□□□ 0.57
CCM2-201ENST00000258781 SPAG11BQ08648 103 aa18.6■□□□□ 0.57
CCM2-201ENST00000258781 TRIAP1O43715 76 aa18.59■□□□□ 0.57
CCM2-201ENST00000258781 COX17Q14061 63 aa18.59■□□□□ 0.57
CCM2-201ENST00000258781 DNAH10OSP0CZ25 163 aa18.58■□□□□ 0.57
CCM2-201ENST00000258781 CCL18P55774 89 aa18.58■□□□□ 0.57
CCM2-201ENST00000258781 LYSTQ99698 3801 aa18.58■□□□□ 0.57
CCM2-201ENST00000258781 SND1-IT1Q9HBX3 110 aa18.58■□□□□ 0.57
CCM2-201ENST00000258781 PRO0461Q9UI25 63 aa18.58■□□□□ 0.57
CCM2-201ENST00000258781 KRTAP26-1Q6PEX3 210 aa18.57■□□□□ 0.56
CCM2-201ENST00000258781 TGP01266 2768 aa18.57■□□□□ 0.56
CCM2-201ENST00000258781 COX6CP09669 75 aa18.54■□□□□ 0.56
CCM2-201ENST00000258781 LINC00588Q9Y4M8 146 aa18.54■□□□□ 0.56
CCM2-201ENST00000258781 STARD9Q9P2P6 4700 aa18.54■□□□□ 0.56
CCM2-201ENST00000258781 TRAV13-2A0A0B4J235 113 aa18.54■□□□□ 0.56
CCM2-201ENST00000258781 PLECQ15149 4684 aaKnown RBP18.53■□□□□ 0.56
CCM2-201ENST00000258781 WFDC2Q14508 124 aa18.52■□□□□ 0.55
CCM2-201ENST00000258781 OCIAD2Q56VL3 154 aa18.51■□□□□ 0.55
CCM2-201ENST00000258781 C1orf43Q9BWL3 253 aa18.51■□□□□ 0.55
CCM2-201ENST00000258781 ATXN8Q156A1 80 aa18.5■□□□□ 0.55
CCM2-201ENST00000258781 C6orf223Q8N319 242 aa18.5■□□□□ 0.55
CCM2-201ENST00000258781 MUC7Q8TAX7 377 aa18.5■□□□□ 0.55
CCM2-201ENST00000258781 IGKV2-28A0A075B6P5 120 aa18.5■□□□□ 0.55
CCM2-201ENST00000258781 IGKV2D-28P01615 120 aa18.5■□□□□ 0.55
CCM2-201ENST00000258781 UNQ6190/PRO20217Q6UXQ8 127 aa18.48■□□□□ 0.55
CCM2-201ENST00000258781 NTN5Q8WTR8 489 aaPredicted RBP18.48■□□□□ 0.55
CCM2-201ENST00000258781 GVQW2A0A096LPI5 108 aaPredicted RBP18.48■□□□□ 0.55
CCM2-201ENST00000258781 MTURNQ8N3F0 131 aa18.48■□□□□ 0.55
CCM2-201ENST00000258781 C10orf25Q5T742 122 aa18.47■□□□□ 0.55
CCM2-201ENST00000258781 LINC00337Q8N6G1 96 aa18.47■□□□□ 0.55
CCM2-201ENST00000258781 UPK3BQ9BT76 320 aa18.46■□□□□ 0.55
CCM2-201ENST00000258781 C9orf116Q5BN46 136 aaPredicted RBP18.46■□□□□ 0.54
CCM2-201ENST00000258781 LINC00526Q96FQ7 95 aa18.45■□□□□ 0.54
CCM2-201ENST00000258781 TENM2Q9NT68 2774 aa18.44■□□□□ 0.54
CCM2-201ENST00000258781 SMCPP49901 116 aaPredicted RBP18.43■□□□□ 0.54
CCM2-201ENST00000258781 IGKV2D-24A0A075B6R9 120 aa18.43■□□□□ 0.54
CCM2-201ENST00000258781 K7ERU9 68 aa18.43■□□□□ 0.54
CCM2-201ENST00000258781 ZNF561-AS1K7EIQ3 104 aa18.41■□□□□ 0.54
CCM2-201ENST00000258781 C15orf56Q8N910 161 aa18.41■□□□□ 0.54
CCM2-201ENST00000258781 NDUFC2O95298 119 aa18.41■□□□□ 0.54
CCM2-201ENST00000258781 LINC01620Q4KN68 170 aa18.41■□□□□ 0.54
CCM2-201ENST00000258781 LST1O00453 97 aa18.39■□□□□ 0.54
CCM2-201ENST00000258781 RPL28P46779 137 aaKnown RBP18.39■□□□□ 0.54
CCM2-201ENST00000258781 ETDBQ3ZM63 59 aa18.39■□□□□ 0.53
CCM2-201ENST00000258781 CLEC2BQ92478 149 aa18.39■□□□□ 0.53
CCM2-201ENST00000258781 C2orf48Q96LS8 159 aa18.39■□□□□ 0.53
CCM2-201ENST00000258781 APLNQ9ULZ1 77 aa18.39■□□□□ 0.53
CCM2-201ENST00000258781 NUPR2A6NF83 97 aa18.38■□□□□ 0.53
CCM2-201ENST00000258781 C9JAW5 83 aa18.38■□□□□ 0.53
CCM2-201ENST00000258781 M0QXV9 152 aa18.38■□□□□ 0.53
CCM2-201ENST00000258781 HIGD2BQ4VC39 106 aa18.38■□□□□ 0.53
CCM2-201ENST00000258781 C6orf48Q9UBA6 75 aa18.38■□□□□ 0.53
CCM2-201ENST00000258781 Q9HAA7 133 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms