RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 CMC4P56277 68 aaPredicted RBP6.31□□□□□ -1.4
CKAP2-201ENST00000258607 KPRPQ5T749 579 aaPredicted RBP6.3□□□□□ -1.4
CKAP2-201ENST00000258607 SBSPONQ8IVN8 264 aa6.3□□□□□ -1.4
CKAP2-201ENST00000258607 PYGO1Q9Y3Y4 419 aa6.3□□□□□ -1.4
CKAP2-201ENST00000258607 UNQ6190/PRO20217Q6UXQ8 127 aa6.3□□□□□ -1.4
CKAP2-201ENST00000258607 ICOSQ9Y6W8 199 aa6.3□□□□□ -1.4
CKAP2-201ENST00000258607 COX6CP09669 75 aa6.29□□□□□ -1.4
CKAP2-201ENST00000258607 RPL32P62910 135 aaKnown RBP6.29□□□□□ -1.4
CKAP2-201ENST00000258607 MIAQ16674 131 aa6.29□□□□□ -1.4
CKAP2-201ENST00000258607 SMCPP49901 116 aaPredicted RBP6.29□□□□□ -1.4
CKAP2-201ENST00000258607 C10orf25Q5T742 122 aa6.29□□□□□ -1.4
CKAP2-201ENST00000258607 CARD19Q96LW7 228 aa6.29□□□□□ -1.4
CKAP2-201ENST00000258607 DEFB131BA0A096LNP1 70 aa6.28□□□□□ -1.4
CKAP2-201ENST00000258607 FUSP35637 526 aaKnown RBP eCLIP6.28□□□□□ -1.4
CKAP2-201ENST00000258607 TAL2Q16559 108 aa6.28□□□□□ -1.4
CKAP2-201ENST00000258607 Q8NAQ8 132 aa6.28□□□□□ -1.4
CKAP2-201ENST00000258607 SPANXB1Q9NS25 103 aaPredicted RBP6.27□□□□□ -1.4
CKAP2-201ENST00000258607 COX7A2LO14548 114 aa6.27□□□□□ -1.41
CKAP2-201ENST00000258607 MRPL23Q16540 153 aaKnown RBP6.27□□□□□ -1.41
CKAP2-201ENST00000258607 C11orf45Q8TAV5 145 aa6.27□□□□□ -1.41
CKAP2-201ENST00000258607 LINC01620Q4KN68 170 aa6.27□□□□□ -1.41
CKAP2-201ENST00000258607 LITAFQ99732 161 aa6.27□□□□□ -1.41
CKAP2-201ENST00000258607 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.26□□□□□ -1.41
CKAP2-201ENST00000258607 RPL18AQ02543 176 aaKnown RBP6.26□□□□□ -1.41
CKAP2-201ENST00000258607 SPAG11BQ08648 103 aa6.26□□□□□ -1.41
CKAP2-201ENST00000258607 OVOL2Q9BRP0 275 aa6.26□□□□□ -1.41
CKAP2-201ENST00000258607 TTC32Q5I0X7 151 aa6.26□□□□□ -1.41
CKAP2-201ENST00000258607 J3QR89 54 aa6.26□□□□□ -1.41
CKAP2-201ENST00000258607 CCL18P55774 89 aa6.26□□□□□ -1.41
CKAP2-201ENST00000258607 IL17DQ8TAD2 202 aa6.26□□□□□ -1.41
CKAP2-201ENST00000258607 MDFIQ99750 246 aa6.26□□□□□ -1.41
CKAP2-201ENST00000258607 S100A7L2Q5SY68 101 aa6.25□□□□□ -1.41
CKAP2-201ENST00000258607 LINC00337Q8N6G1 96 aa6.25□□□□□ -1.41
CKAP2-201ENST00000258607 IGHV3OR16-9A0A0B4J2B5 98 aa6.25□□□□□ -1.41
CKAP2-201ENST00000258607 DNAL4O96015 105 aa6.25□□□□□ -1.41
CKAP2-201ENST00000258607 M0R2N4 97 aa6.24□□□□□ -1.41
CKAP2-201ENST00000258607 NDUFA1O15239 70 aa6.24□□□□□ -1.41
CKAP2-201ENST00000258607 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.24□□□□□ -1.41
CKAP2-201ENST00000258607 F8W1H4 67 aa6.24□□□□□ -1.41
CKAP2-201ENST00000258607 ZNF561-AS1K7EIQ3 104 aa6.24□□□□□ -1.41
CKAP2-201ENST00000258607 LYRM7Q5U5X0 104 aa6.24□□□□□ -1.41
CKAP2-201ENST00000258607 RNF183Q96D59 192 aa6.24□□□□□ -1.41
CKAP2-201ENST00000258607 TIRAPP58753 221 aa6.23□□□□□ -1.41
CKAP2-201ENST00000258607 ATXN8Q156A1 80 aa6.23□□□□□ -1.41
CKAP2-201ENST00000258607 FAM218AQ96MZ4 157 aa6.23□□□□□ -1.41
CKAP2-201ENST00000258607 MT-ATP8P03928 68 aa6.23□□□□□ -1.41
CKAP2-201ENST00000258607 FOXI1Q12951 378 aa6.23□□□□□ -1.41
CKAP2-201ENST00000258607 ESRGQ1W209 222 aa6.23□□□□□ -1.41
CKAP2-201ENST00000258607 DPH3Q96FX2 82 aa6.23□□□□□ -1.41
CKAP2-201ENST00000258607 TRAV8-4A0A0B4J246 113 aa6.22□□□□□ -1.41
CKAP2-201ENST00000258607 LYRM9A8MSI8 78 aa6.22□□□□□ -1.41
CKAP2-201ENST00000258607 MIFP14174 115 aa6.22□□□□□ -1.41
CKAP2-201ENST00000258607 KIR2DL5BQ8NHK3 375 aa6.22□□□□□ -1.41
CKAP2-201ENST00000258607 TRBV20-1A0A075B6N2 111 aa6.22□□□□□ -1.41
CKAP2-201ENST00000258607 GAGE2AQ6NT46 116 aa6.22□□□□□ -1.41
CKAP2-201ENST00000258607 CAMK2N2Q96S95 79 aa6.22□□□□□ -1.41
CKAP2-201ENST00000258607 IGKV2-28A0A075B6P5 120 aa6.21□□□□□ -1.41
CKAP2-201ENST00000258607 A0A087WYN8 130 aa6.21□□□□□ -1.41
CKAP2-201ENST00000258607 IGKV2-24A0A0C4DH68 120 aa6.21□□□□□ -1.41
CKAP2-201ENST00000258607 IGKV2D-28P01615 120 aa6.21□□□□□ -1.41
CKAP2-201ENST00000258607 LYPD5Q6UWN5 251 aa6.21□□□□□ -1.41
CKAP2-201ENST00000258607 SMIM11BQ8TCY0 68 aa6.21□□□□□ -1.41
CKAP2-201ENST00000258607 C15orf53Q8NAA6 179 aa6.21□□□□□ -1.42
CKAP2-201ENST00000258607 DEFB105AQ8NG35 78 aa6.21□□□□□ -1.42
CKAP2-201ENST00000258607 BAALC-AS2P0C853 105 aa6.2□□□□□ -1.42
CKAP2-201ENST00000258607 CASC10Q5T4H9 136 aa6.2□□□□□ -1.42
CKAP2-201ENST00000258607 C14orf132Q9NPU4 83 aa6.2□□□□□ -1.42
CKAP2-201ENST00000258607 PRO0461Q9UI25 63 aa6.2□□□□□ -1.42
CKAP2-201ENST00000258607 H7C423 109 aa6.2□□□□□ -1.42
CKAP2-201ENST00000258607 C1orf43Q9BWL3 253 aa6.2□□□□□ -1.42
CKAP2-201ENST00000258607 A0A087WZ39 114 aa6.19□□□□□ -1.42
CKAP2-201ENST00000258607 IGLV5-39A0A0G2JS06 123 aa6.19□□□□□ -1.42
CKAP2-201ENST00000258607 TEN1Q86WV5 123 aa6.19□□□□□ -1.42
CKAP2-201ENST00000258607 UBE2DNLQ8IWF7 75 aa6.19□□□□□ -1.42
CKAP2-201ENST00000258607 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
CKAP2-201ENST00000258607 LYSTQ99698 3801 aa6.19□□□□□ -1.42
CKAP2-201ENST00000258607 SMIM9A6NGZ8 99 aa6.18□□□□□ -1.42
CKAP2-201ENST00000258607 RPL37AP8A6NKH3 93 aa6.18□□□□□ -1.42
CKAP2-201ENST00000258607 GAGE2BQ13066 116 aa6.18□□□□□ -1.42
CKAP2-201ENST00000258607 C6orf99Q4VX62 202 aa6.18□□□□□ -1.42
CKAP2-201ENST00000258607 SHISA2Q6UWI4 295 aa6.18□□□□□ -1.42
CKAP2-201ENST00000258607 A0A0B4J2C4 111 aa6.18□□□□□ -1.42
CKAP2-201ENST00000258607 XGP55808 180 aa6.18□□□□□ -1.42
CKAP2-201ENST00000258607 C9orf129Q5T035 196 aaKnown RBP6.18□□□□□ -1.42
CKAP2-201ENST00000258607 ENHOQ6UWT2 76 aa6.18□□□□□ -1.42
CKAP2-201ENST00000258607 Q8NDZ9 215 aa6.17□□□□□ -1.42
CKAP2-201ENST00000258607 WFDC9Q8NEX5 89 aa6.17□□□□□ -1.42
CKAP2-201ENST00000258607 PPDPFLQ8WWR9 84 aa6.17□□□□□ -1.42
CKAP2-201ENST00000258607 CD164L2Q6UWJ8 174 aa6.17□□□□□ -1.42
CKAP2-201ENST00000258607 PSCAO43653 123 aa6.17□□□□□ -1.42
CKAP2-201ENST00000258607 SPANXDQ9BXN6 97 aa6.17□□□□□ -1.42
CKAP2-201ENST00000258607 SPANXCQ9NY87 97 aa6.17□□□□□ -1.42
CKAP2-201ENST00000258607 K7EIL1 84 aa6.16□□□□□ -1.42
CKAP2-201ENST00000258607 LELP1Q5T871 98 aa6.16□□□□□ -1.42
CKAP2-201ENST00000258607 CSDC2Q9Y534 153 aaKnown RBP6.15□□□□□ -1.42
CKAP2-201ENST00000258607 IGLV5-45A0A087WSX0 123 aa6.15□□□□□ -1.42
CKAP2-201ENST00000258607 LAMTOR3Q9UHA4 124 aa6.15□□□□□ -1.42
CKAP2-201ENST00000258607 IGKV3D-7A0A0C4DH55 119 aa6.15□□□□□ -1.43
CKAP2-201ENST00000258607 HERV-K104P63124 156 aa6.15□□□□□ -1.43
CKAP2-201ENST00000258607 Q6ZRU5 148 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms