RNA–Protein interactions for RNA: ENST00000255304.8

USPL1-201, Transcript of ubiquitin specific peptidase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USPL1, Length 3,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-201ENST00000255304 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.52□□□□□ -1.53
USPL1-201ENST00000255304 SND1-IT1Q9HBX3 110 aa5.51□□□□□ -1.53
USPL1-201ENST00000255304 UQCRQO14949 82 aa5.51□□□□□ -1.53
USPL1-201ENST00000255304 C9orf66Q5T8R8 295 aa5.51□□□□□ -1.53
USPL1-201ENST00000255304 SBSPONQ8IVN8 264 aa5.51□□□□□ -1.53
USPL1-201ENST00000255304 DEFB105AQ8NG35 78 aa5.51□□□□□ -1.53
USPL1-201ENST00000255304 TIMM17AQ99595 171 aa5.51□□□□□ -1.53
USPL1-201ENST00000255304 DNAH3Q8TD57 4116 aa5.51□□□□□ -1.53
USPL1-201ENST00000255304 C14orf132Q9NPU4 83 aa5.51□□□□□ -1.53
USPL1-201ENST00000255304 SPANXA1Q9NS26 97 aa5.51□□□□□ -1.53
USPL1-201ENST00000255304 TRAV25A0A0B4J276 109 aa5.5□□□□□ -1.53
USPL1-201ENST00000255304 XAGE1AQ9HD64 81 aa5.5□□□□□ -1.53
USPL1-201ENST00000255304 NCR3O14931 201 aa5.5□□□□□ -1.53
USPL1-201ENST00000255304 SPART-AS1P0CW21 52 aa5.5□□□□□ -1.53
USPL1-201ENST00000255304 RBMY1FQ15415 496 aaKnown RBP5.5□□□□□ -1.53
USPL1-201ENST00000255304 DNAH7Q8WXX0 4024 aa5.49□□□□□ -1.53
USPL1-201ENST00000255304 PRKDCP78527 4128 aaKnown RBP5.49□□□□□ -1.53
USPL1-201ENST00000255304 TMEM89A2RUT3 159 aa5.49□□□□□ -1.53
USPL1-201ENST00000255304 SLPIP03973 132 aa5.49□□□□□ -1.53
USPL1-201ENST00000255304 TRAV23DV6A0A075B6W5 121 aa5.49□□□□□ -1.53
USPL1-201ENST00000255304 POLR2KP53803 58 aaKnown RBP5.49□□□□□ -1.53
USPL1-201ENST00000255304 Q6Q795 121 aa5.49□□□□□ -1.53
USPL1-201ENST00000255304 POM121L12Q8N7R1 296 aa5.49□□□□□ -1.53
USPL1-201ENST00000255304 TMEM223A0PJW6 202 aa5.49□□□□□ -1.53
USPL1-201ENST00000255304 IGIPA6NJ69 53 aa5.49□□□□□ -1.53
USPL1-201ENST00000255304 CNFNQ9BYD5 112 aa5.49□□□□□ -1.53
USPL1-201ENST00000255304 IGHV1-58A0A0C4DH39 117 aa5.48□□□□□ -1.53
USPL1-201ENST00000255304 A0A0B4J2C4 111 aa5.48□□□□□ -1.53
USPL1-201ENST00000255304 SOCS3O14543 225 aa5.48□□□□□ -1.53
USPL1-201ENST00000255304 PRO0255Q9UI72 69 aa5.48□□□□□ -1.53
USPL1-201ENST00000255304 TRBV27A0A0K0K1C4 114 aa5.48□□□□□ -1.53
USPL1-201ENST00000255304 COX7CP15954 63 aa5.48□□□□□ -1.53
USPL1-201ENST00000255304 TIRAPP58753 221 aa5.48□□□□□ -1.53
USPL1-201ENST00000255304 C1orf158Q8N1D5 194 aa5.48□□□□□ -1.53
USPL1-201ENST00000255304 COX7B2Q8TF08 81 aa5.48□□□□□ -1.53
USPL1-201ENST00000255304 COX7A2LO14548 114 aa5.47□□□□□ -1.53
USPL1-201ENST00000255304 CAMK2N2Q96S95 79 aa5.47□□□□□ -1.53
USPL1-201ENST00000255304 TRBV30A0A0K0K1B3 111 aa5.47□□□□□ -1.53
USPL1-201ENST00000255304 HILS1P60008 231 aa5.47□□□□□ -1.53
USPL1-201ENST00000255304 HAMPP81172 84 aa5.47□□□□□ -1.53
USPL1-201ENST00000255304 RPL18AQ02543 176 aaKnown RBP5.47□□□□□ -1.53
USPL1-201ENST00000255304 C20orf197Q8N268 126 aa5.47□□□□□ -1.53
USPL1-201ENST00000255304 Q8N2B8 174 aa5.47□□□□□ -1.53
USPL1-201ENST00000255304 H3BT86 120 aa5.47□□□□□ -1.53
USPL1-201ENST00000255304 MED14OSP0DP75 135 aa5.47□□□□□ -1.53
USPL1-201ENST00000255304 LRRC75A-AS1Q8N1F1 130 aa5.47□□□□□ -1.53
USPL1-201ENST00000255304 IGHV4-28A0A0C4DH34 117 aa5.46□□□□□ -1.53
USPL1-201ENST00000255304 LST1O00453 97 aa5.46□□□□□ -1.53
USPL1-201ENST00000255304 LINC00643Q86TS7 51 aa5.46□□□□□ -1.53
USPL1-201ENST00000255304 C9orf85Q96MD7 179 aa5.46□□□□□ -1.53
USPL1-201ENST00000255304 IGKV2-24A0A0C4DH68 120 aa5.46□□□□□ -1.54
USPL1-201ENST00000255304 SPAG11BQ08648 103 aa5.46□□□□□ -1.54
USPL1-201ENST00000255304 AMELXQ99217 191 aa5.46□□□□□ -1.54
USPL1-201ENST00000255304 C9orf116Q5BN46 136 aaPredicted RBP5.45□□□□□ -1.54
USPL1-201ENST00000255304 FAM19A4Q96LR4 140 aa5.45□□□□□ -1.54
USPL1-201ENST00000255304 STAB2Q8WWQ8 2551 aa5.45□□□□□ -1.54
USPL1-201ENST00000255304 IGLV4-60A0A075B6I1 120 aa5.45□□□□□ -1.54
USPL1-201ENST00000255304 LINC01546A6NGU7 62 aa5.45□□□□□ -1.54
USPL1-201ENST00000255304 A0A096LNT2 108 aa5.44□□□□□ -1.54
USPL1-201ENST00000255304 PRR3P79522 188 aaKnown RBP5.44□□□□□ -1.54
USPL1-201ENST00000255304 COX6A2Q02221 97 aa5.44□□□□□ -1.54
USPL1-201ENST00000255304 NKAPP1Q8N9T2 125 aa5.44□□□□□ -1.54
USPL1-201ENST00000255304 TRBV10-1A0A0K0K1A3 114 aa5.44□□□□□ -1.54
USPL1-201ENST00000255304 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
USPL1-201ENST00000255304 TRBV6-8A0A0A6YYG3 113 aa5.44□□□□□ -1.54
USPL1-201ENST00000255304 REG3AQ06141 175 aa5.44□□□□□ -1.54
USPL1-201ENST00000255304 SNURFQ9Y675 71 aa5.44□□□□□ -1.54
USPL1-201ENST00000255304 A0A096LNI7 61 aa5.43□□□□□ -1.54
USPL1-201ENST00000255304 OXTP01178 125 aa5.43□□□□□ -1.54
USPL1-201ENST00000255304 CHCHD10Q8WYQ3 142 aaPredicted RBP5.43□□□□□ -1.54
USPL1-201ENST00000255304 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.43□□□□□ -1.54
USPL1-201ENST00000255304 IGHV4-30-4P0DP06 118 aa5.43□□□□□ -1.54
USPL1-201ENST00000255304 MIAQ16674 131 aa5.43□□□□□ -1.54
USPL1-201ENST00000255304 UBE2D4Q9Y2X8 147 aa5.43□□□□□ -1.54
USPL1-201ENST00000255304 TRBV7-7A0A0K0K1E9 115 aa5.43□□□□□ -1.54
USPL1-201ENST00000255304 ATOX1O00244 68 aa5.43□□□□□ -1.54
USPL1-201ENST00000255304 C9orf129Q5T035 196 aaKnown RBP5.43□□□□□ -1.54
USPL1-201ENST00000255304 MPLKIPQ8TAP9 179 aa5.43□□□□□ -1.54
USPL1-201ENST00000255304 FAM218AQ96MZ4 157 aa5.43□□□□□ -1.54
USPL1-201ENST00000255304 GHRHP01286 108 aa5.42□□□□□ -1.54
USPL1-201ENST00000255304 NANOS2P60321 138 aaKnown RBP5.42□□□□□ -1.54
USPL1-201ENST00000255304 USP17L23D6RBM5 183 aa5.42□□□□□ -1.54
USPL1-201ENST00000255304 Q8N3U1 123 aa5.42□□□□□ -1.54
USPL1-201ENST00000255304 PYGO1Q9Y3Y4 419 aa5.42□□□□□ -1.54
USPL1-201ENST00000255304 DEFB131BA0A096LNP1 70 aa5.41□□□□□ -1.54
USPL1-201ENST00000255304 TRAV13-2A0A0B4J235 113 aa5.41□□□□□ -1.54
USPL1-201ENST00000255304 LINC00242Q5T6M2 205 aa5.41□□□□□ -1.54
USPL1-201ENST00000255304 C11orf45Q8TAV5 145 aa5.41□□□□□ -1.54
USPL1-201ENST00000255304 LINC00308Q8TCZ7 52 aa5.41□□□□□ -1.54
USPL1-201ENST00000255304 LINC00846Q9NV44 126 aa5.41□□□□□ -1.54
USPL1-201ENST00000255304 IGLV1-51P01701 117 aa5.4□□□□□ -1.54
USPL1-201ENST00000255304 ENHOQ6UWT2 76 aa5.4□□□□□ -1.54
USPL1-201ENST00000255304 FAM19A1Q7Z5A9 133 aa5.4□□□□□ -1.54
USPL1-201ENST00000255304 FAM236DA0A1B0GTK5 79 aa5.4□□□□□ -1.54
USPL1-201ENST00000255304 M0R2N4 97 aa5.4□□□□□ -1.54
USPL1-201ENST00000255304 FAM236CP0DP71 79 aa5.4□□□□□ -1.54
USPL1-201ENST00000255304 RBM3P98179 157 aaKnown RBP5.4□□□□□ -1.54
USPL1-201ENST00000255304 LINC00336Q6ZUF6 198 aa5.4□□□□□ -1.54
USPL1-201ENST00000255304 TRBV6-5A0A0K0K1A5 114 aa5.4□□□□□ -1.55
USPL1-201ENST00000255304 KRTAP1-1Q07627 177 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms