RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 SNURFQ9Y675 71 aa3.27□□□□□ -1.89
VPS13C-201ENST00000249837 FAM240AA0A1B0GVK7 77 aa3.27□□□□□ -1.89
VPS13C-201ENST00000249837 UBE2BP63146 152 aa3.27□□□□□ -1.89
VPS13C-201ENST00000249837 SMIM9A6NGZ8 99 aa3.27□□□□□ -1.89
VPS13C-201ENST00000249837 Q6Q795 121 aa3.27□□□□□ -1.89
VPS13C-201ENST00000249837 Q6ZQY7 126 aa3.27□□□□□ -1.89
VPS13C-201ENST00000249837 C6orf223Q8N319 242 aa3.27□□□□□ -1.89
VPS13C-201ENST00000249837 IGLV5-39A0A0G2JS06 123 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 EIF4EBP3O60516 100 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-201ENST00000249837 Q6JHZ5 121 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 TMEM258P61165 79 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 UBR5O95071 2799 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-201ENST00000249837 FHL3Q13643 280 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 A8MTW9 85 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 NBEAL2Q6ZNJ1 2754 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 LYRM9A8MSI8 78 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 CD164L2Q6UWJ8 174 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 RPL28P46779 137 aaKnown RBP3.26□□□□□ -1.89
VPS13C-201ENST00000249837 FHL2Q14192 279 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 NTM-AS1Q6ZSK4 140 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 FAM218AQ96MZ4 157 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 LOC107984640A0A0U1RRK4 108 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-201ENST00000249837 C3orf84H3BNL1 204 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 ATP5EP2Q5VTU8 51 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 SMR3AQ99954 134 aa3.26□□□□□ -1.89
VPS13C-201ENST00000249837 FAM236DA0A1B0GTK5 79 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 FAM236CP0DP71 79 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 IMUPQ9GZP8 106 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 CDK2AP2O75956 126 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 RMI2Q96E14 147 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 LINC00846Q9NV44 126 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 RETNQ9HD89 108 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 HILS1P60008 231 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 INAFM1C9JVW0 142 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 IGLV5-45A0A087WSX0 123 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 SYCNQ0VAF6 134 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 LELP1Q5T871 98 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 Q8IZM0 81 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 KLK9Q2XQG4 91 aa3.25□□□□□ -1.89
VPS13C-201ENST00000249837 NDUFC2O95298 119 aa3.24□□□□□ -1.89
VPS13C-201ENST00000249837 CSDC2Q9Y534 153 aaKnown RBP3.24□□□□□ -1.89
VPS13C-201ENST00000249837 Q8N814 137 aa3.24□□□□□ -1.89
VPS13C-201ENST00000249837 IGKV2-24A0A0C4DH68 120 aa3.24□□□□□ -1.89
VPS13C-201ENST00000249837 LY6G6DO95868 133 aa3.24□□□□□ -1.89
VPS13C-201ENST00000249837 NBEAQ8NFP9 2946 aa3.24□□□□□ -1.89
VPS13C-201ENST00000249837 ITPR1Q14643 2758 aa3.24□□□□□ -1.89
VPS13C-201ENST00000249837 IGLV1-51P01701 117 aa3.24□□□□□ -1.89
VPS13C-201ENST00000249837 CCKP06307 115 aa3.24□□□□□ -1.89
VPS13C-201ENST00000249837 KPRPQ5T749 579 aaPredicted RBP3.24□□□□□ -1.89
VPS13C-201ENST00000249837 XIRP2A4UGR9 3374 aa3.24□□□□□ -1.89
VPS13C-201ENST00000249837 IGKV2-28A0A075B6P5 120 aa3.23□□□□□ -1.89
VPS13C-201ENST00000249837 H3BQ85 93 aa3.23□□□□□ -1.89
VPS13C-201ENST00000249837 IGKV2D-28P01615 120 aa3.23□□□□□ -1.89
VPS13C-201ENST00000249837 UNC80Q8N2C7 3258 aa3.23□□□□□ -1.89
VPS13C-201ENST00000249837 MIFP14174 115 aa3.23□□□□□ -1.89
VPS13C-201ENST00000249837 IGHV3OR16-9A0A0B4J2B5 98 aa3.23□□□□□ -1.89
VPS13C-201ENST00000249837 CYSRT1A8MQ03 144 aa3.23□□□□□ -1.89
VPS13C-201ENST00000249837 TRBV10-3A0A0K0K1G6 114 aa3.23□□□□□ -1.89
VPS13C-201ENST00000249837 DNAH14Q0VDD8 3507 aa3.23□□□□□ -1.89
VPS13C-201ENST00000249837 FAM19A5Q7Z5A7 132 aaPredicted RBP3.23□□□□□ -1.89
VPS13C-201ENST00000249837 CDH23Q9H251 3354 aa3.23□□□□□ -1.89
VPS13C-201ENST00000249837 TRBV7-7A0A0K0K1E9 115 aa3.23□□□□□ -1.89
VPS13C-201ENST00000249837 C11orf45Q8TAV5 145 aa3.22□□□□□ -1.89
VPS13C-201ENST00000249837 LITAFQ99732 161 aa3.22□□□□□ -1.89
VPS13C-201ENST00000249837 A0A0U1RQV1 116 aa3.22□□□□□ -1.89
VPS13C-201ENST00000249837 A0A096LNI7 61 aa3.22□□□□□ -1.89
VPS13C-201ENST00000249837 NANOS2P60321 138 aaKnown RBP3.22□□□□□ -1.89
VPS13C-201ENST00000249837 SHISA2Q6UWI4 295 aa3.22□□□□□ -1.89
VPS13C-201ENST00000249837 NDUFS5O43920 106 aa3.22□□□□□ -1.89
VPS13C-201ENST00000249837 TRAV7A0A075B6U4 112 aa3.22□□□□□ -1.89
VPS13C-201ENST00000249837 M0R378 163 aa3.22□□□□□ -1.89
VPS13C-201ENST00000249837 C5orf47Q569G3 176 aa3.22□□□□□ -1.89
VPS13C-201ENST00000249837 DEFB131BA0A096LNP1 70 aa3.21□□□□□ -1.89
VPS13C-201ENST00000249837 HIGD2AQ9BW72 106 aa3.21□□□□□ -1.89
VPS13C-201ENST00000249837 PPDPFQ9H3Y8 114 aa3.21□□□□□ -1.89
VPS13C-201ENST00000249837 PRR4Q16378 134 aa3.21□□□□□ -1.9
VPS13C-201ENST00000249837 HRCT1Q6UXD1 115 aa3.21□□□□□ -1.9
VPS13C-201ENST00000249837 MPLKIPQ8TAP9 179 aa3.21□□□□□ -1.9
VPS13C-201ENST00000249837 BAHCC1Q9P281 2608 aa3.21□□□□□ -1.9
VPS13C-201ENST00000249837 RPL37AP8A6NKH3 93 aa3.21□□□□□ -1.9
VPS13C-201ENST00000249837 Q8N3U1 123 aa3.21□□□□□ -1.9
VPS13C-201ENST00000249837 OXLD1Q5BKU9 147 aa3.21□□□□□ -1.9
VPS13C-201ENST00000249837 KIR2DL5BQ8NHK3 375 aa3.21□□□□□ -1.9
VPS13C-201ENST00000249837 PRUNE2Q8WUY3 3088 aa3.21□□□□□ -1.9
VPS13C-201ENST00000249837 CELA1Q9UNI1 258 aa3.21□□□□□ -1.9
VPS13C-201ENST00000249837 ZNF73O43830 326 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-201ENST00000249837 MP68P56378 58 aa3.2□□□□□ -1.9
VPS13C-201ENST00000249837 IGHV4-30-4P0DP06 118 aa3.2□□□□□ -1.9
VPS13C-201ENST00000249837 SMCR5Q8TEV8 140 aa3.2□□□□□ -1.9
VPS13C-201ENST00000249837 NHLRC4P0CG21 123 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-201ENST00000249837 STAB2Q8WWQ8 2551 aa3.2□□□□□ -1.9
VPS13C-201ENST00000249837 COX17Q14061 63 aa3.2□□□□□ -1.9
VPS13C-201ENST00000249837 FRYQ5TBA9 3013 aa3.2□□□□□ -1.9
VPS13C-201ENST00000249837 NSD1Q96L73 2696 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-201ENST00000249837 LRCOL1A6NCL2 159 aa3.2□□□□□ -1.9
VPS13C-201ENST00000249837 UBE2AP49459 152 aa3.2□□□□□ -1.9
VPS13C-201ENST00000249837 C10orf25Q5T742 122 aa3.2□□□□□ -1.9
VPS13C-201ENST00000249837 ITPR2Q14571 2701 aa3.2□□□□□ -1.9
VPS13C-201ENST00000249837 A0A0J9YWU9 116 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms